RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 NUP35Q8NFH5 326 aa8.04□□□□□ -1.12
SREBF1-209ENST00000470247 GFRA4Q9GZZ7 299 aa8.04□□□□□ -1.12
SREBF1-209ENST00000470247 ZMAT4Q9H898 229 aa8.04□□□□□ -1.12
SREBF1-209ENST00000470247 RPS10P5Q9NQ39 176 aa8.04□□□□□ -1.12
SREBF1-209ENST00000470247 FBN3Q75N90 2809 aa8.04□□□□□ -1.12
SREBF1-209ENST00000470247 MUC21A0A0G2JKD1 596 aa8.03□□□□□ -1.12
SREBF1-209ENST00000470247 MUC21A0A140T8X8 626 aa8.03□□□□□ -1.12
SREBF1-209ENST00000470247 A0A1W2PPQ1 181 aa8.03□□□□□ -1.12
SREBF1-209ENST00000470247 HIGD1CA8MV81 97 aa8.03□□□□□ -1.12
SREBF1-209ENST00000470247 SPINK4O60575 86 aa8.03□□□□□ -1.12
SREBF1-209ENST00000470247 S100A4P26447 101 aaKnown RBP8.03□□□□□ -1.12
SREBF1-209ENST00000470247 CTRLP40313 264 aa8.03□□□□□ -1.12
SREBF1-209ENST00000470247 EMP1P54849 157 aa8.03□□□□□ -1.12
SREBF1-209ENST00000470247 DMRTA1Q5VZB9 504 aa8.03□□□□□ -1.12
SREBF1-209ENST00000470247 OR10AG1Q8NH19 301 aa8.03□□□□□ -1.12
SREBF1-209ENST00000470247 PTH2Q96A98 100 aa8.03□□□□□ -1.12
SREBF1-209ENST00000470247 SPXQ9BT56 116 aa8.03□□□□□ -1.12
SREBF1-209ENST00000470247 CNFNQ9BYD5 112 aa8.03□□□□□ -1.12
SREBF1-209ENST00000470247 C11orf68Q9H3H3 251 aaKnown RBP8.03□□□□□ -1.12
SREBF1-209ENST00000470247 NOP10Q9NPE3 64 aaKnown RBP8.03□□□□□ -1.12
SREBF1-209ENST00000470247 DKK2Q9UBU2 259 aa8.03□□□□□ -1.12
SREBF1-209ENST00000470247 TIMM8BQ9Y5J9 83 aaPredicted RBP8.03□□□□□ -1.12
SREBF1-209ENST00000470247 IGHV4-4A0A075B6R2 117 aa8.02□□□□□ -1.13
SREBF1-209ENST00000470247 A0A0J9YWU9 116 aa8.02□□□□□ -1.13
SREBF1-209ENST00000470247 F2Z2F3 143 aa8.02□□□□□ -1.13
SREBF1-209ENST00000470247 M0R2P5 195 aa8.02□□□□□ -1.13
SREBF1-209ENST00000470247 NXPH4O95158 308 aa8.02□□□□□ -1.13
SREBF1-209ENST00000470247 S100A1P23297 94 aa8.02□□□□□ -1.13
SREBF1-209ENST00000470247 FAM3BP58499 235 aaPredicted RBP8.02□□□□□ -1.13
SREBF1-209ENST00000470247 WDR73Q6P4I2 378 aa8.02□□□□□ -1.13
SREBF1-209ENST00000470247 Q6ZTI0 123 aa8.02□□□□□ -1.13
SREBF1-209ENST00000470247 RASL10AQ92737 203 aa8.02□□□□□ -1.13
SREBF1-209ENST00000470247 PGLYRP4Q96LB8 373 aa8.02□□□□□ -1.13
SREBF1-209ENST00000470247 IMMP2LQ96T52 175 aa8.02□□□□□ -1.13
SREBF1-209ENST00000470247 CELA1Q9UNI1 258 aa8.02□□□□□ -1.13
SREBF1-209ENST00000470247 SNURFLB1AK76 121 aa8.01□□□□□ -1.13
SREBF1-209ENST00000470247 LGALS9BQ3B8N2 356 aa8.01□□□□□ -1.13
SREBF1-209ENST00000470247 FAM222AQ5U5X8 452 aa8.01□□□□□ -1.13
SREBF1-209ENST00000470247 POM121L12Q8N7R1 296 aa8.01□□□□□ -1.13
SREBF1-209ENST00000470247 MSRB1Q9NZV6 116 aa8.01□□□□□ -1.13
SREBF1-209ENST00000470247 NAT8BQ9UHF3 227 aa8.01□□□□□ -1.13
SREBF1-209ENST00000470247 LYRM9A8MSI8 78 aa8□□□□□ -1.13
SREBF1-209ENST00000470247 NTF3P20783 257 aa8□□□□□ -1.13
SREBF1-209ENST00000470247 PIK3CD-AS1Q5SR53 167 aa8□□□□□ -1.13
SREBF1-209ENST00000470247 YPEL4Q96NS1 127 aa8□□□□□ -1.13
SREBF1-209ENST00000470247 TPPP3Q9BW30 176 aa8□□□□□ -1.13
SREBF1-209ENST00000470247 JPT2Q9H910 190 aa8□□□□□ -1.13
SREBF1-209ENST00000470247 MRPL16Q9NX20 251 aaKnown RBP8□□□□□ -1.13
SREBF1-209ENST00000470247 PHLDA3Q9Y5J5 127 aa8□□□□□ -1.13
SREBF1-209ENST00000470247 TRGV1A0A0A0MS02 117 aa7.99□□□□□ -1.13
SREBF1-209ENST00000470247 SSTP61278 116 aa7.99□□□□□ -1.13
SREBF1-209ENST00000470247 CACNG7P62955 275 aa7.99□□□□□ -1.13
SREBF1-209ENST00000470247 C12orf74Q32Q52 190 aa7.99□□□□□ -1.13
SREBF1-209ENST00000470247 ZNF876PQ49A33 203 aa7.99□□□□□ -1.13
SREBF1-209ENST00000470247 C18orf15Q96N68 181 aa7.99□□□□□ -1.13
SREBF1-209ENST00000470247 EDA2RQ9HAV5 297 aa7.99□□□□□ -1.13
SREBF1-209ENST00000470247 U3KQK5 164 aa7.99□□□□□ -1.13
SREBF1-209ENST00000470247 A0A1B0GUT8 65 aa7.98□□□□□ -1.13
SREBF1-209ENST00000470247 A0A1B0GXF2 115 aa7.98□□□□□ -1.13
SREBF1-209ENST00000470247 GAGE12BA1L429 117 aa7.98□□□□□ -1.13
SREBF1-209ENST00000470247 CXorf65A6NEN9 183 aa7.98□□□□□ -1.13
SREBF1-209ENST00000470247 M0R381 172 aa7.98□□□□□ -1.13
SREBF1-209ENST00000470247 SCO1O75880 301 aa7.98□□□□□ -1.13
SREBF1-209ENST00000470247 GAGE7O76087 117 aa7.98□□□□□ -1.13
SREBF1-209ENST00000470247 GAGE12FP0CL80 117 aa7.98□□□□□ -1.13
SREBF1-209ENST00000470247 GAGE12GP0CL81 117 aa7.98□□□□□ -1.13
SREBF1-209ENST00000470247 GAGE12IP0CL82 117 aa7.98□□□□□ -1.13
SREBF1-209ENST00000470247 SPART-AS1P0CW21 52 aa7.98□□□□□ -1.13
SREBF1-209ENST00000470247 LINC00315P59091 139 aa7.98□□□□□ -1.13
SREBF1-209ENST00000470247 UFSP1Q6NVU6 142 aa7.98□□□□□ -1.13
SREBF1-209ENST00000470247 TMEM88Q6PEY1 159 aa7.98□□□□□ -1.13
SREBF1-209ENST00000470247 ZFP82Q8N141 532 aa7.98□□□□□ -1.13
SREBF1-209ENST00000470247 SAMD10Q9BYL1 202 aa7.98□□□□□ -1.13
SREBF1-209ENST00000470247 URGCP-MRPS24S4R325 110 aa7.98□□□□□ -1.13
SREBF1-209ENST00000470247 STAB2Q8WWQ8 2551 aa7.98□□□□□ -1.13
SREBF1-209ENST00000470247 RS1O15537 224 aa7.97□□□□□ -1.13
SREBF1-209ENST00000470247 CRYGDP07320 174 aa7.97□□□□□ -1.13
SREBF1-209ENST00000470247 ELOBQ15370 118 aa7.97□□□□□ -1.13
SREBF1-209ENST00000470247 SPANXN1Q5VSR9 72 aa7.97□□□□□ -1.13
SREBF1-209ENST00000470247 CFAP126Q5VTH2 177 aa7.97□□□□□ -1.13
SREBF1-209ENST00000470247 CBLN2Q8IUK8 224 aa7.97□□□□□ -1.13
SREBF1-209ENST00000470247 NDUFAF3Q9BU61 184 aa7.97□□□□□ -1.13
SREBF1-209ENST00000470247 KIF25-AS1Q9Y6Z4 181 aa7.97□□□□□ -1.13
SREBF1-209ENST00000470247 NACAE9PAV3 2078 aa7.97□□□□□ -1.13
SREBF1-209ENST00000470247 TRAV9-1A0A075B6T8 112 aa7.96□□□□□ -1.14
SREBF1-209ENST00000470247 DEFB130BP0DP73 79 aa7.96□□□□□ -1.14
SREBF1-209ENST00000470247 DEFB130AP0DP74 79 aa7.96□□□□□ -1.14
SREBF1-209ENST00000470247 EVI2AP22794 236 aa7.96□□□□□ -1.14
SREBF1-209ENST00000470247 RIGQ13278 110 aa7.96□□□□□ -1.14
SREBF1-209ENST00000470247 TWIST1Q15672 202 aa7.96□□□□□ -1.14
SREBF1-209ENST00000470247 MRPL54Q6P161 138 aaKnown RBP7.96□□□□□ -1.14
SREBF1-209ENST00000470247 GATD1Q8NB37 220 aa7.96□□□□□ -1.14
SREBF1-209ENST00000470247 SYT8Q8NBV8 401 aa7.96□□□□□ -1.14
SREBF1-209ENST00000470247 ZNF479Q96JC4 524 aa7.96□□□□□ -1.14
SREBF1-209ENST00000470247 BTF3L4Q96K17 158 aa7.96□□□□□ -1.14
SREBF1-209ENST00000470247 SMCO4Q9NRQ5 59 aa7.96□□□□□ -1.14
SREBF1-209ENST00000470247 COL7A1Q02388 2944 aa7.96□□□□□ -1.14
SREBF1-209ENST00000470247 TRBV24-1A0A075B6N3 115 aa7.95□□□□□ -1.14
SREBF1-209ENST00000470247 TGIF2-C20orf24A0A0A6YYL0 155 aa7.95□□□□□ -1.14
SREBF1-209ENST00000470247 TRAV4A0A0B4J268 109 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms