RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 FAM231DQ6ZW35 169 aa4.89□□□□□ -1.63
HLA-DQA1-205ENST00000460633 WFDC11Q8NEX6 87 aa4.89□□□□□ -1.63
HLA-DQA1-205ENST00000460633 MLST8Q9BVC4 326 aa4.89□□□□□ -1.63
HLA-DQA1-205ENST00000460633 ZNF492Q9P255 531 aa4.89□□□□□ -1.63
HLA-DQA1-205ENST00000460633 A0A0U1RRA0 63 aa4.89□□□□□ -1.63
HLA-DQA1-205ENST00000460633 IGKV1-16P04430 117 aa4.89□□□□□ -1.63
HLA-DQA1-205ENST00000460633 SHANK2-AS3Q9BTD1 123 aa4.89□□□□□ -1.63
HLA-DQA1-205ENST00000460633 PHF3Q92576 2039 aaKnown RBP4.89□□□□□ -1.63
HLA-DQA1-205ENST00000460633 TAX1BP3O14907 124 aa4.89□□□□□ -1.63
HLA-DQA1-205ENST00000460633 NPC2P61916 151 aa4.89□□□□□ -1.63
HLA-DQA1-205ENST00000460633 HIST1H4AP62805 103 aaKnown RBP4.89□□□□□ -1.63
HLA-DQA1-205ENST00000460633 IGFL4Q6B9Z1 124 aa4.89□□□□□ -1.63
HLA-DQA1-205ENST00000460633 AMTNQ6UX39 209 aa4.89□□□□□ -1.63
HLA-DQA1-205ENST00000460633 C9JAW5 83 aa4.89□□□□□ -1.63
HLA-DQA1-205ENST00000460633 C1orf134Q5TEV5 83 aa4.89□□□□□ -1.63
HLA-DQA1-205ENST00000460633 ZNF833PQ6ZTB9 187 aa4.89□□□□□ -1.63
HLA-DQA1-205ENST00000460633 LINC00173Q6ZV60 143 aa4.89□□□□□ -1.63
HLA-DQA1-205ENST00000460633 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.89□□□□□ -1.63
HLA-DQA1-205ENST00000460633 LGALS9BQ3B8N2 356 aa4.88□□□□□ -1.63
HLA-DQA1-205ENST00000460633 LGALS9CQ6DKI2 356 aa4.88□□□□□ -1.63
HLA-DQA1-205ENST00000460633 CEND1Q8N111 149 aa4.88□□□□□ -1.63
HLA-DQA1-205ENST00000460633 WWC2-AS2Q96NR7 200 aa4.88□□□□□ -1.63
HLA-DQA1-205ENST00000460633 ADAMTS20P59510 1910 aa4.88□□□□□ -1.63
HLA-DQA1-205ENST00000460633 IGKV1D-17A0A075B6S4 117 aa4.88□□□□□ -1.63
HLA-DQA1-205ENST00000460633 FRMD6-AS1P0C7T7 363 aa4.88□□□□□ -1.63
HLA-DQA1-205ENST00000460633 FUSP35637 526 aaKnown RBP eCLIP4.88□□□□□ -1.63
HLA-DQA1-205ENST00000460633 C8orf49Q96NF6 230 aa4.88□□□□□ -1.63
HLA-DQA1-205ENST00000460633 YPEL4Q96NS1 127 aa4.88□□□□□ -1.63
HLA-DQA1-205ENST00000460633 SNRNP200O75643 2136 aaKnown RBP4.88□□□□□ -1.63
HLA-DQA1-205ENST00000460633 PLA2G1BP04054 148 aaKnown RBP4.88□□□□□ -1.63
HLA-DQA1-205ENST00000460633 FAM104BQ5XKR9 115 aa4.88□□□□□ -1.63
HLA-DQA1-205ENST00000460633 C2orf82Q6UX34 121 aa4.88□□□□□ -1.63
HLA-DQA1-205ENST00000460633 PRIMA1Q86XR5 153 aa4.88□□□□□ -1.63
HLA-DQA1-205ENST00000460633 GATD1Q8NB37 220 aa4.88□□□□□ -1.63
HLA-DQA1-205ENST00000460633 IGFBPL1Q8WX77 278 aa4.88□□□□□ -1.63
HLA-DQA1-205ENST00000460633 SCRT2Q9NQ03 307 aa4.88□□□□□ -1.63
HLA-DQA1-205ENST00000460633 MED12Q93074 2177 aa4.88□□□□□ -1.63
HLA-DQA1-205ENST00000460633 TRBV20-1A0A075B6N2 111 aa4.87□□□□□ -1.63
HLA-DQA1-205ENST00000460633 K7EMI3 77 aa4.87□□□□□ -1.63
HLA-DQA1-205ENST00000460633 XCL1P47992 114 aa4.87□□□□□ -1.63
HLA-DQA1-205ENST00000460633 PRR25Q96S07 402 aa4.87□□□□□ -1.63
HLA-DQA1-205ENST00000460633 DKK2Q9UBU2 259 aa4.87□□□□□ -1.63
HLA-DQA1-205ENST00000460633 PRO0255Q9UI72 69 aa4.87□□□□□ -1.63
HLA-DQA1-205ENST00000460633 RBAKDNA6NC62 111 aa4.87□□□□□ -1.63
HLA-DQA1-205ENST00000460633 K7EQD1 137 aa4.87□□□□□ -1.63
HLA-DQA1-205ENST00000460633 TIMM21Q9BVV7 248 aa4.87□□□□□ -1.63
HLA-DQA1-205ENST00000460633 TRAV13-2A0A0B4J235 113 aa4.87□□□□□ -1.63
HLA-DQA1-205ENST00000460633 UBE2D3P61077 147 aa4.87□□□□□ -1.63
HLA-DQA1-205ENST00000460633 DIAPH2-AS1Q14236 149 aa4.87□□□□□ -1.63
HLA-DQA1-205ENST00000460633 MRPL51Q4U2R6 128 aaKnown RBP4.87□□□□□ -1.63
HLA-DQA1-205ENST00000460633 HEATR5AQ86XA9 2040 aa4.87□□□□□ -1.63
HLA-DQA1-205ENST00000460633 GTSF1Q8WW33 167 aa4.87□□□□□ -1.63
HLA-DQA1-205ENST00000460633 PPDPFLQ8WWR9 84 aa4.87□□□□□ -1.63
HLA-DQA1-205ENST00000460633 NOP10Q9NPE3 64 aaKnown RBP4.87□□□□□ -1.63
HLA-DQA1-205ENST00000460633 A0A0J9YY99 117 aa4.87□□□□□ -1.63
HLA-DQA1-205ENST00000460633 EDN2P20800 178 aa4.87□□□□□ -1.63
HLA-DQA1-205ENST00000460633 REG3GQ6UW15 175 aa4.87□□□□□ -1.63
HLA-DQA1-205ENST00000460633 PCP2Q8IVA1 136 aa4.87□□□□□ -1.63
HLA-DQA1-205ENST00000460633 TMEM75Q8N9X5 138 aa4.87□□□□□ -1.63
HLA-DQA1-205ENST00000460633 PTPRBP23467 1997 aa4.86□□□□□ -1.63
HLA-DQA1-205ENST00000460633 COX7A2LO14548 114 aa4.86□□□□□ -1.63
HLA-DQA1-205ENST00000460633 IGLC1P0CG04 106 aa4.86□□□□□ -1.63
HLA-DQA1-205ENST00000460633 PMVKQ15126 192 aa4.86□□□□□ -1.63
HLA-DQA1-205ENST00000460633 DEFB135Q30KP9 77 aa4.86□□□□□ -1.63
HLA-DQA1-205ENST00000460633 WDR86Q86TI4 376 aa4.86□□□□□ -1.63
HLA-DQA1-205ENST00000460633 NPBQ8NG41 125 aa4.86□□□□□ -1.63
HLA-DQA1-205ENST00000460633 A6NDX4 124 aa4.86□□□□□ -1.63
HLA-DQA1-205ENST00000460633 KNCNA6PVL3 124 aa4.86□□□□□ -1.63
HLA-DQA1-205ENST00000460633 CRYGDP07320 174 aa4.86□□□□□ -1.63
HLA-DQA1-205ENST00000460633 CFHR3Q02985 330 aa4.86□□□□□ -1.63
HLA-DQA1-205ENST00000460633 ZNRF2Q8NHG8 242 aa4.86□□□□□ -1.63
HLA-DQA1-205ENST00000460633 LGALS9O00182 355 aa4.86□□□□□ -1.63
HLA-DQA1-205ENST00000460633 NDUFS5O43920 106 aa4.86□□□□□ -1.63
HLA-DQA1-205ENST00000460633 SPINK13Q1W4C9 94 aa4.86□□□□□ -1.63
HLA-DQA1-205ENST00000460633 C11orf1Q9H5F2 150 aa4.86□□□□□ -1.63
HLA-DQA1-205ENST00000460633 SDK2Q58EX2 2172 aa4.86□□□□□ -1.63
HLA-DQA1-205ENST00000460633 PRSS46E5RG02 174 aa4.86□□□□□ -1.63
HLA-DQA1-205ENST00000460633 K7EM74 188 aa4.86□□□□□ -1.63
HLA-DQA1-205ENST00000460633 CCDC140Q96MF4 163 aa4.86□□□□□ -1.63
HLA-DQA1-205ENST00000460633 CABIN1Q9Y6J0 2220 aa4.86□□□□□ -1.63
HLA-DQA1-205ENST00000460633 RTTNQ86VV8 2226 aa4.86□□□□□ -1.63
HLA-DQA1-205ENST00000460633 ZNF503-AS2A6NEH8 195 aa4.86□□□□□ -1.63
HLA-DQA1-205ENST00000460633 CHKB-CPT1BH3BT56 60 aa4.86□□□□□ -1.63
HLA-DQA1-205ENST00000460633 NDUFS7O75251 213 aa4.86□□□□□ -1.63
HLA-DQA1-205ENST00000460633 NDPQ00604 133 aa4.86□□□□□ -1.63
HLA-DQA1-205ENST00000460633 C12orf74Q32Q52 190 aa4.86□□□□□ -1.63
HLA-DQA1-205ENST00000460633 C9orf153Q5TBE3 101 aa4.86□□□□□ -1.63
HLA-DQA1-205ENST00000460633 MRPL55Q7Z7F7 128 aaKnown RBP4.86□□□□□ -1.63
HLA-DQA1-205ENST00000460633 TRAV13-1A0A0B4J241 112 aa4.85□□□□□ -1.63
HLA-DQA1-205ENST00000460633 LY6HO94772 140 aa4.85□□□□□ -1.63
HLA-DQA1-205ENST00000460633 IGHG2P01859 326 aa4.85□□□□□ -1.63
HLA-DQA1-205ENST00000460633 IGHV4-38-2P0DP08 117 aa4.85□□□□□ -1.63
HLA-DQA1-205ENST00000460633 IFITM1P13164 125 aa4.85□□□□□ -1.63
HLA-DQA1-205ENST00000460633 FXYD5Q96DB9 178 aa4.85□□□□□ -1.63
HLA-DQA1-205ENST00000460633 TMEM14CQ9P0S9 112 aa4.85□□□□□ -1.63
HLA-DQA1-205ENST00000460633 NPYP01303 97 aa4.85□□□□□ -1.63
HLA-DQA1-205ENST00000460633 GRNP28799 593 aaKnown RBP4.85□□□□□ -1.63
HLA-DQA1-205ENST00000460633 LINC00337Q8N6G1 96 aa4.85□□□□□ -1.63
HLA-DQA1-205ENST00000460633 NDUFA4L2Q9NRX3 87 aa4.85□□□□□ -1.63
HLA-DQA1-205ENST00000460633 SVILO95425 2214 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms