RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 SYS1-DBNDD2H3BUS1 97 aa12.71□□□□□ -0.37
LAPTM4B-201ENST00000445593 OR5AL1P0C617 328 aa12.71□□□□□ -0.37
LAPTM4B-201ENST00000445593 S100A4P26447 101 aaKnown RBP12.71□□□□□ -0.37
LAPTM4B-201ENST00000445593 LINC01559Q495D7 138 aa12.71□□□□□ -0.37
LAPTM4B-201ENST00000445593 C9orf47Q6ZRZ4 202 aa12.71□□□□□ -0.37
LAPTM4B-201ENST00000445593 C18orf15Q96N68 181 aa12.71□□□□□ -0.38
LAPTM4B-201ENST00000445593 IGHV4OR15-8A0A075B7B6 117 aa12.7□□□□□ -0.38
LAPTM4B-201ENST00000445593 A0A087WW49 117 aa12.7□□□□□ -0.38
LAPTM4B-201ENST00000445593 A0A1B0GW15 77 aa12.7□□□□□ -0.38
LAPTM4B-201ENST00000445593 ZNF493Q6ZR52 646 aa12.7□□□□□ -0.38
LAPTM4B-201ENST00000445593 COX8CQ7Z4L0 72 aa12.7□□□□□ -0.38
LAPTM4B-201ENST00000445593 J3QLI3 93 aa12.7□□□□□ -0.38
LAPTM4B-201ENST00000445593 PSMG4Q5JS54 123 aa12.7□□□□□ -0.38
LAPTM4B-201ENST00000445593 AP1S3Q96PC3 154 aa12.7□□□□□ -0.38
LAPTM4B-201ENST00000445593 GCN1Q92616 2671 aaKnown RBP12.7□□□□□ -0.38
LAPTM4B-201ENST00000445593 SOCS3O14543 225 aa12.69□□□□□ -0.38
LAPTM4B-201ENST00000445593 IGLL1P15814 213 aa12.69□□□□□ -0.38
LAPTM4B-201ENST00000445593 GTF2H5Q6ZYL4 71 aa12.69□□□□□ -0.38
LAPTM4B-201ENST00000445593 KLHDC1Q8N7A1 406 aa12.69□□□□□ -0.38
LAPTM4B-201ENST00000445593 GNRH2O43555 120 aa12.69□□□□□ -0.38
LAPTM4B-201ENST00000445593 BOD1L2Q8IYS8 172 aa12.69□□□□□ -0.38
LAPTM4B-201ENST00000445593 MAP1LC3CQ9BXW4 147 aa12.69□□□□□ -0.38
LAPTM4B-201ENST00000445593 Q6YL49 198 aa12.69□□□□□ -0.38
LAPTM4B-201ENST00000445593 ZFAND2AQ8N6M9 145 aa12.69□□□□□ -0.38
LAPTM4B-201ENST00000445593 RNF185Q96GF1 192 aa12.69□□□□□ -0.38
LAPTM4B-201ENST00000445593 ZNF702PQ9H963 129 aa12.69□□□□□ -0.38
LAPTM4B-201ENST00000445593 CITED1Q99966 193 aa12.68□□□□□ -0.38
LAPTM4B-201ENST00000445593 TRAV12-2A0A075B6T6 113 aa12.68□□□□□ -0.38
LAPTM4B-201ENST00000445593 ANXA2RQ3ZCQ2 193 aa12.68□□□□□ -0.38
LAPTM4B-201ENST00000445593 G3V4G9 280 aa12.67□□□□□ -0.38
LAPTM4B-201ENST00000445593 TMEM191AQ9H0A3 160 aa12.67□□□□□ -0.38
LAPTM4B-201ENST00000445593 SLURP1P55000 103 aa12.67□□□□□ -0.38
LAPTM4B-201ENST00000445593 HOXD3P31249 432 aaPredicted RBP12.66□□□□□ -0.38
LAPTM4B-201ENST00000445593 MRPL53Q96EL3 112 aaKnown RBP12.66□□□□□ -0.38
LAPTM4B-201ENST00000445593 MS4A6AQ9H2W1 248 aa12.66□□□□□ -0.38
LAPTM4B-201ENST00000445593 A0A096LNJ9 63 aa12.66□□□□□ -0.38
LAPTM4B-201ENST00000445593 SIGMAR1Q99720 223 aa12.66□□□□□ -0.38
LAPTM4B-201ENST00000445593 TRAV9-2A0A087WT02 112 aa12.65□□□□□ -0.38
LAPTM4B-201ENST00000445593 OVOL1O14753 267 aa12.65□□□□□ -0.38
LAPTM4B-201ENST00000445593 KRTAP1-3Q8IUG1 177 aa12.65□□□□□ -0.38
LAPTM4B-201ENST00000445593 TSSC4Q9Y5U2 329 aaPredicted RBP12.65□□□□□ -0.38
LAPTM4B-201ENST00000445593 TRAV12-3A0A0B4J271 114 aa12.65□□□□□ -0.38
LAPTM4B-201ENST00000445593 H3BUT2 72 aa12.65□□□□□ -0.38
LAPTM4B-201ENST00000445593 LINC00477Q96M19 166 aa12.65□□□□□ -0.38
LAPTM4B-201ENST00000445593 HSPB8Q9UJY1 196 aa12.65□□□□□ -0.38
LAPTM4B-201ENST00000445593 TNFRSF6BO95407 300 aa12.65□□□□□ -0.39
LAPTM4B-201ENST00000445593 MTURNQ8N3F0 131 aa12.65□□□□□ -0.39
LAPTM4B-201ENST00000445593 GEMIN7Q9H840 131 aaKnown RBP12.65□□□□□ -0.39
LAPTM4B-201ENST00000445593 A0A1W2PRX2 142 aa12.64□□□□□ -0.39
LAPTM4B-201ENST00000445593 MGPP08493 103 aa12.64□□□□□ -0.39
LAPTM4B-201ENST00000445593 HTN1P15515 57 aa12.64□□□□□ -0.39
LAPTM4B-201ENST00000445593 C14orf178Q8N769 122 aaPredicted RBP12.64□□□□□ -0.39
LAPTM4B-201ENST00000445593 GATD1Q8NB37 220 aa12.64□□□□□ -0.39
LAPTM4B-201ENST00000445593 PSMG3-AS1Q96PY0 264 aa12.64□□□□□ -0.39
LAPTM4B-201ENST00000445593 ZNF747Q9BV97 191 aa12.64□□□□□ -0.39
LAPTM4B-201ENST00000445593 PHLDA3Q9Y5J5 127 aa12.64□□□□□ -0.39
LAPTM4B-201ENST00000445593 TRAV21A0A0B4J279 112 aa12.63□□□□□ -0.39
LAPTM4B-201ENST00000445593 DCANP1Q8TF63 244 aa12.63□□□□□ -0.39
LAPTM4B-201ENST00000445593 MAP1LC3AQ9H492 121 aa12.63□□□□□ -0.39
LAPTM4B-201ENST00000445593 TEX48A0A1B0GUV7 120 aa12.63□□□□□ -0.39
LAPTM4B-201ENST00000445593 HIVEP2P31629 2446 aa12.62□□□□□ -0.39
LAPTM4B-201ENST00000445593 C7orf71A4D174 169 aa12.62□□□□□ -0.39
LAPTM4B-201ENST00000445593 CACNG7P62955 275 aa12.62□□□□□ -0.39
LAPTM4B-201ENST00000445593 U3KQK5 164 aa12.62□□□□□ -0.39
LAPTM4B-201ENST00000445593 FSHBP01225 129 aa12.62□□□□□ -0.39
LAPTM4B-201ENST00000445593 LGALS1P09382 135 aaKnown RBP12.62□□□□□ -0.39
LAPTM4B-201ENST00000445593 ID1P41134 155 aa12.61□□□□□ -0.39
LAPTM4B-201ENST00000445593 LEPP41159 167 aa12.61□□□□□ -0.39
LAPTM4B-201ENST00000445593 PDZD2O15018 2839 aa12.61□□□□□ -0.39
LAPTM4B-201ENST00000445593 ASIPP42127 132 aa12.61□□□□□ -0.39
LAPTM4B-201ENST00000445593 SPINK13Q1W4C9 94 aa12.61□□□□□ -0.39
LAPTM4B-201ENST00000445593 SMIM20Q8N5G0 67 aa12.61□□□□□ -0.39
LAPTM4B-201ENST00000445593 FN1P02751 2386 aaKnown RBP12.61□□□□□ -0.39
LAPTM4B-201ENST00000445593 BRI3O95415 125 aa12.61□□□□□ -0.39
LAPTM4B-201ENST00000445593 CNFNQ9BYD5 112 aa12.61□□□□□ -0.39
LAPTM4B-201ENST00000445593 JPT2Q9H910 190 aa12.61□□□□□ -0.39
LAPTM4B-201ENST00000445593 HBDP02042 147 aa12.6□□□□□ -0.39
LAPTM4B-201ENST00000445593 OR11H1Q8NG94 326 aa12.6□□□□□ -0.39
LAPTM4B-201ENST00000445593 MRPS16Q9Y3D3 137 aaKnown RBP12.6□□□□□ -0.39
LAPTM4B-201ENST00000445593 AKAP9Q99996 3911 aa12.6□□□□□ -0.39
LAPTM4B-201ENST00000445593 TCTEX1D4Q5JR98 221 aa12.6□□□□□ -0.39
LAPTM4B-201ENST00000445593 ZNF479Q96JC4 524 aa12.6□□□□□ -0.39
LAPTM4B-201ENST00000445593 MUC4Q99102 2169 aa12.6□□□□□ -0.39
LAPTM4B-201ENST00000445593 BVES-AS1Q5T3Y7 98 aa12.59□□□□□ -0.39
LAPTM4B-201ENST00000445593 SIVA1O15304 175 aa12.59□□□□□ -0.39
LAPTM4B-201ENST00000445593 CD7P09564 240 aa12.59□□□□□ -0.39
LAPTM4B-201ENST00000445593 SRSF2Q01130 221 aaKnown RBP12.59□□□□□ -0.39
LAPTM4B-201ENST00000445593 OR2K2Q8NGT1 345 aa12.59□□□□□ -0.39
LAPTM4B-201ENST00000445593 C2CD3Q4AC94 2353 aa12.59□□□□□ -0.39
LAPTM4B-201ENST00000445593 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.59□□□□□ -0.39
LAPTM4B-201ENST00000445593 K7EMT4 169 aa12.58□□□□□ -0.4
LAPTM4B-201ENST00000445593 FAM159AQ6UWV7 190 aa12.58□□□□□ -0.4
LAPTM4B-201ENST00000445593 NEGR1Q7Z3B1 354 aa12.58□□□□□ -0.4
LAPTM4B-201ENST00000445593 RPL39LQ96EH5 51 aaKnown RBP12.58□□□□□ -0.4
LAPTM4B-201ENST00000445593 ELANEP08246 267 aa12.58□□□□□ -0.4
LAPTM4B-201ENST00000445593 SNRPD3P62318 126 aaKnown RBP12.58□□□□□ -0.4
LAPTM4B-201ENST00000445593 KLHL30-AS1Q8NEE0 82 aa12.58□□□□□ -0.4
LAPTM4B-201ENST00000445593 DPF1Q92782 380 aa12.58□□□□□ -0.4
LAPTM4B-201ENST00000445593 SETXQ7Z333 2677 aaKnown RBP12.58□□□□□ -0.4
LAPTM4B-201ENST00000445593 A0A087WWL8 130 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms