RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 FAM215AQ9Y5M1 114 aa1.91□□□□□ -2.1
UBBP3-201ENST00000445497 ICOSQ9Y6W8 199 aa1.91□□□□□ -2.1
UBBP3-201ENST00000445497 MYH6P13533 1939 aa1.91□□□□□ -2.1
UBBP3-201ENST00000445497 KDM6BO15054 1643 aa1.91□□□□□ -2.1
UBBP3-201ENST00000445497 ABCA5Q8WWZ7 1642 aa1.91□□□□□ -2.1
UBBP3-201ENST00000445497 TRPM2O94759 1503 aa1.91□□□□□ -2.1
UBBP3-201ENST00000445497 AGLP35573 1532 aa1.91□□□□□ -2.1
UBBP3-201ENST00000445497 TET3O43151 1660 aa1.9□□□□□ -2.1
UBBP3-201ENST00000445497 ZNF142P52746 1687 aaPredicted RBP1.9□□□□□ -2.1
UBBP3-201ENST00000445497 IGKV2D-26A0A0A0MRZ7 120 aa1.9□□□□□ -2.11
UBBP3-201ENST00000445497 TRAV22A0A0B4J277 110 aa1.9□□□□□ -2.11
UBBP3-201ENST00000445497 TMEM30CPA0ZSE6 113 aa1.9□□□□□ -2.11
UBBP3-201ENST00000445497 CYSRT1A8MQ03 144 aa1.9□□□□□ -2.11
UBBP3-201ENST00000445497 C11orf94C9JXX5 98 aa1.9□□□□□ -2.11
UBBP3-201ENST00000445497 PROK1P58294 105 aa1.9□□□□□ -2.11
UBBP3-201ENST00000445497 EIF4EBP1Q13541 118 aaPredicted RBP1.9□□□□□ -2.11
UBBP3-201ENST00000445497 C2orf82Q6UX34 121 aa1.9□□□□□ -2.11
UBBP3-201ENST00000445497 Q6ZQT0 140 aa1.9□□□□□ -2.11
UBBP3-201ENST00000445497 FAM223AQ8IWN6 122 aa1.9□□□□□ -2.11
UBBP3-201ENST00000445497 C20orf197Q8N268 126 aa1.9□□□□□ -2.11
UBBP3-201ENST00000445497 FAM19A2Q8N3H0 131 aa1.9□□□□□ -2.11
UBBP3-201ENST00000445497 MIR7-3HGQ8N6C7 128 aa1.9□□□□□ -2.11
UBBP3-201ENST00000445497 C15orf56Q8N910 161 aa1.9□□□□□ -2.11
UBBP3-201ENST00000445497 LINC01560Q8TB33 94 aa1.9□□□□□ -2.11
UBBP3-201ENST00000445497 TMEM254Q8TBM7 123 aa1.9□□□□□ -2.11
UBBP3-201ENST00000445497 CYSTM1Q9H1C7 97 aa1.9□□□□□ -2.11
UBBP3-201ENST00000445497 C22orf24Q9Y442 160 aa1.9□□□□□ -2.11
UBBP3-201ENST00000445497 RGPD1P0DJD0 1748 aa1.9□□□□□ -2.11
UBBP3-201ENST00000445497 XRN1Q8IZH2 1706 aaKnown RBP1.9□□□□□ -2.11
UBBP3-201ENST00000445497 ATP7AQ04656 1500 aa1.9□□□□□ -2.11
UBBP3-201ENST00000445497 KIDINS220Q9ULH0 1771 aa1.9□□□□□ -2.11
UBBP3-201ENST00000445497 HCFC1P51610 2035 aa1.9□□□□□ -2.11
UBBP3-201ENST00000445497 NESP48681 1621 aa1.89□□□□□ -2.11
UBBP3-201ENST00000445497 PLXNA4Q9HCM2 1894 aa1.89□□□□□ -2.11
UBBP3-201ENST00000445497 KIF26AQ9ULI4 1882 aaPredicted RBP1.89□□□□□ -2.11
UBBP3-201ENST00000445497 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.89□□□□□ -2.11
UBBP3-201ENST00000445497 SDHAF1A6NFY7 115 aa1.89□□□□□ -2.11
UBBP3-201ENST00000445497 CHKB-CPT1BH3BT56 60 aa1.89□□□□□ -2.11
UBBP3-201ENST00000445497 IGLV1-44P01699 117 aa1.89□□□□□ -2.11
UBBP3-201ENST00000445497 TRGV3P03979 118 aa1.89□□□□□ -2.11
UBBP3-201ENST00000445497 SAA2P0DJI9 122 aaPredicted RBP1.89□□□□□ -2.11
UBBP3-201ENST00000445497 SNRPGP62308 76 aaKnown RBP1.89□□□□□ -2.11
UBBP3-201ENST00000445497 C10orf128Q5T292 105 aa1.89□□□□□ -2.11
UBBP3-201ENST00000445497 C1orf134Q5TEV5 83 aa1.89□□□□□ -2.11
UBBP3-201ENST00000445497 Q6ZS52 159 aa1.89□□□□□ -2.11
UBBP3-201ENST00000445497 NTM-AS1Q6ZSK4 140 aa1.89□□□□□ -2.11
UBBP3-201ENST00000445497 CLECL1Q8IZS7 167 aa1.89□□□□□ -2.11
UBBP3-201ENST00000445497 LINC01006Q8NI28 216 aa1.89□□□□□ -2.11
UBBP3-201ENST00000445497 UBE2D4Q9Y2X8 147 aa1.89□□□□□ -2.11
UBBP3-201ENST00000445497 U3KQK5 164 aa1.89□□□□□ -2.11
UBBP3-201ENST00000445497 NEXMIFQ5QGS0 1516 aa1.89□□□□□ -2.11
UBBP3-201ENST00000445497 COL18A1P39060 1754 aa1.89□□□□□ -2.11
UBBP3-201ENST00000445497 RGPD4Q7Z3J3 1758 aa1.89□□□□□ -2.11
UBBP3-201ENST00000445497 MYOM1P52179 1685 aa1.89□□□□□ -2.11
UBBP3-201ENST00000445497 ROBO1Q9Y6N7 1651 aa1.89□□□□□ -2.11
UBBP3-201ENST00000445497 MYH8P13535 1937 aa1.89□□□□□ -2.11
UBBP3-201ENST00000445497 MYLKQ15746 1914 aa1.89□□□□□ -2.11
UBBP3-201ENST00000445497 KIF13AQ9H1H9 1805 aa1.89□□□□□ -2.11
UBBP3-201ENST00000445497 ARHGEF28Q8N1W1 1705 aaKnown RBP1.88□□□□□ -2.11
UBBP3-201ENST00000445497 RGPD8O14715 1765 aaPredicted RBP1.88□□□□□ -2.11
UBBP3-201ENST00000445497 RGPD5Q99666 1765 aa1.88□□□□□ -2.11
UBBP3-201ENST00000445497 CLTCQ00610 1675 aaKnown RBP1.88□□□□□ -2.11
UBBP3-201ENST00000445497 IGLV3-16A0A075B6K0 115 aa1.88□□□□□ -2.11
UBBP3-201ENST00000445497 TRBV6-8A0A0A6YYG3 113 aa1.88□□□□□ -2.11
UBBP3-201ENST00000445497 TRAV1-2A0A0B4J238 106 aa1.88□□□□□ -2.11
UBBP3-201ENST00000445497 IGHV3-64DA0A0J9YX35 117 aa1.88□□□□□ -2.11
UBBP3-201ENST00000445497 LOC101927531A0A1B0GV80 90 aa1.88□□□□□ -2.11
UBBP3-201ENST00000445497 C5orf67F2Z3F1 127 aa1.88□□□□□ -2.11
UBBP3-201ENST00000445497 F8WEM9 126 aa1.88□□□□□ -2.11
UBBP3-201ENST00000445497 IGHV3-53P01767 116 aa1.88□□□□□ -2.11
UBBP3-201ENST00000445497 PATE4P0C8F1 98 aa1.88□□□□□ -2.11
UBBP3-201ENST00000445497 DNAH10OSP0CZ25 163 aa1.88□□□□□ -2.11
UBBP3-201ENST00000445497 MGST1P10620 155 aaKnown RBP1.88□□□□□ -2.11
UBBP3-201ENST00000445497 HMGA1P17096 107 aaKnown RBP1.88□□□□□ -2.11
UBBP3-201ENST00000445497 MDKP21741 143 aaPredicted RBP1.88□□□□□ -2.11
UBBP3-201ENST00000445497 UBE2D1P51668 147 aa1.88□□□□□ -2.11
UBBP3-201ENST00000445497 ELOF1P60002 83 aaKnown RBP1.88□□□□□ -2.11
UBBP3-201ENST00000445497 RPL36AP83881 106 aaKnown RBP1.88□□□□□ -2.11
UBBP3-201ENST00000445497 NNATQ16517 81 aa1.88□□□□□ -2.11
UBBP3-201ENST00000445497 FAM27BQ5VT28 67 aa1.88□□□□□ -2.11
UBBP3-201ENST00000445497 NCBP2-AS2Q69YL0 99 aa1.88□□□□□ -2.11
UBBP3-201ENST00000445497 TMEM105Q8N8V8 129 aa1.88□□□□□ -2.11
UBBP3-201ENST00000445497 CIRBP-AS1Q8TBR5 109 aa1.88□□□□□ -2.11
UBBP3-201ENST00000445497 DEFB126Q9BYW3 111 aa1.88□□□□□ -2.11
UBBP3-201ENST00000445497 TMEM14BQ9NUH8 114 aa1.88□□□□□ -2.11
UBBP3-201ENST00000445497 ARHGEF5Q12774 1597 aa1.88□□□□□ -2.11
UBBP3-201ENST00000445497 ITSN1Q15811 1721 aa1.88□□□□□ -2.11
UBBP3-201ENST00000445497 IFT172Q9UG01 1749 aa1.88□□□□□ -2.11
UBBP3-201ENST00000445497 CDC42BPBQ9Y5S2 1711 aa1.88□□□□□ -2.11
UBBP3-201ENST00000445497 EIF2AK4Q9P2K8 1649 aaKnown RBP1.88□□□□□ -2.11
UBBP3-201ENST00000445497 RGPD2P0DJD1 1756 aa1.87□□□□□ -2.11
UBBP3-201ENST00000445497 SLIT2O94813 1529 aa1.87□□□□□ -2.11
UBBP3-201ENST00000445497 CPS1P31327 1500 aa1.87□□□□□ -2.11
UBBP3-201ENST00000445497 IGHV3-64A0A075B6Q5 118 aa1.87□□□□□ -2.11
UBBP3-201ENST00000445497 IGHV1-18A0A0C4DH31 117 aa1.87□□□□□ -2.11
UBBP3-201ENST00000445497 TEX49A0A1B0GTD5 131 aa1.87□□□□□ -2.11
UBBP3-201ENST00000445497 FAM223BA6NKX1 122 aa1.87□□□□□ -2.11
UBBP3-201ENST00000445497 HIGD1CA8MV81 97 aa1.87□□□□□ -2.11
UBBP3-201ENST00000445497 LHBP01229 141 aa1.87□□□□□ -2.11
UBBP3-201ENST00000445497 CLPSP04118 112 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 162.5 ms