RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 LINC00299Q6ZSB3 139 aa2.77□□□□□ -1.97
USP54-206ENST00000433394 CLECL1Q8IZS7 167 aa2.77□□□□□ -1.97
USP54-206ENST00000433394 OR4S1Q8NGB4 309 aa2.77□□□□□ -1.97
USP54-206ENST00000433394 OR4C12Q96R67 309 aa2.77□□□□□ -1.97
USP54-206ENST00000433394 RTL8AQ9BWD3 113 aa2.77□□□□□ -1.97
USP54-206ENST00000433394 TMEM191AQ9H0A3 160 aa2.77□□□□□ -1.97
USP54-206ENST00000433394 PRO1933Q9H354 126 aa2.77□□□□□ -1.97
USP54-206ENST00000433394 CKLFQ9UBR5 152 aa2.77□□□□□ -1.97
USP54-206ENST00000433394 FAM215AQ9Y5M1 114 aa2.77□□□□□ -1.97
USP54-206ENST00000433394 DMXL1Q9Y485 3027 aa2.76□□□□□ -1.97
USP54-206ENST00000433394 APC2O95996 2303 aa2.76□□□□□ -1.97
USP54-206ENST00000433394 DMDP11532 3685 aa2.76□□□□□ -1.97
USP54-206ENST00000433394 TRAV9-1A0A075B6T8 112 aa2.76□□□□□ -1.97
USP54-206ENST00000433394 TRGV5A0A0B4J1U4 118 aa2.76□□□□□ -1.97
USP54-206ENST00000433394 ZNF860A6NHJ4 632 aa2.76□□□□□ -1.97
USP54-206ENST00000433394 GNGT2O14610 69 aa2.76□□□□□ -1.97
USP54-206ENST00000433394 CDC42EP2O14613 210 aa2.76□□□□□ -1.97
USP54-206ENST00000433394 CD14P08571 375 aa2.76□□□□□ -1.97
USP54-206ENST00000433394 IGLC6P0CF74 106 aa2.76□□□□□ -1.97
USP54-206ENST00000433394 RPL30P62888 115 aaKnown RBP2.76□□□□□ -1.97
USP54-206ENST00000433394 UBA52P62987 128 aaKnown RBP2.76□□□□□ -1.97
USP54-206ENST00000433394 ERHP84090 104 aaKnown RBP2.76□□□□□ -1.97
USP54-206ENST00000433394 MSMO1Q15800 293 aa2.76□□□□□ -1.97
USP54-206ENST00000433394 DEFB110Q30KQ9 67 aa2.76□□□□□ -1.97
USP54-206ENST00000433394 PYY3Q5JQD4 70 aa2.76□□□□□ -1.97
USP54-206ENST00000433394 TMEM244Q5VVB8 128 aa2.76□□□□□ -1.97
USP54-206ENST00000433394 SSX8Q7RTT4 187 aa2.76□□□□□ -1.97
USP54-206ENST00000433394 GPHB5Q86YW7 130 aa2.76□□□□□ -1.97
USP54-206ENST00000433394 TEX29Q8N6K0 151 aa2.76□□□□□ -1.97
USP54-206ENST00000433394 OR4X2Q8NGF9 303 aa2.76□□□□□ -1.97
USP54-206ENST00000433394 OR5D14Q8NGL3 314 aa2.76□□□□□ -1.97
USP54-206ENST00000433394 SDF2Q99470 211 aa2.76□□□□□ -1.97
USP54-206ENST00000433394 RNF122Q9H9V4 155 aa2.76□□□□□ -1.97
USP54-206ENST00000433394 XAGE1AQ9HD64 81 aa2.76□□□□□ -1.97
USP54-206ENST00000433394 COMMD3Q9UBI1 195 aa2.76□□□□□ -1.97
USP54-206ENST00000433394 NOP16Q9Y3C1 178 aaKnown RBP2.76□□□□□ -1.97
USP54-206ENST00000433394 EXPH5Q8NEV8 1989 aa2.76□□□□□ -1.97
USP54-206ENST00000433394 DOCK10Q96BY6 2186 aa2.76□□□□□ -1.97
USP54-206ENST00000433394 TLN1Q9Y490 2541 aaKnown RBP2.75□□□□□ -1.97
USP54-206ENST00000433394 PTPRBP23467 1997 aa2.75□□□□□ -1.97
USP54-206ENST00000433394 IGLV3-32A0A0A0MS00 114 aa2.75□□□□□ -1.97
USP54-206ENST00000433394 MUC21A0A0G2JKD1 596 aa2.75□□□□□ -1.97
USP54-206ENST00000433394 MUC21A0A140T8X8 626 aa2.75□□□□□ -1.97
USP54-206ENST00000433394 C7orf71A4D174 169 aa2.75□□□□□ -1.97
USP54-206ENST00000433394 ZNF670-ZNF695F2Z2N8 137 aa2.75□□□□□ -1.97
USP54-206ENST00000433394 GABARAPH6UMI1 98 aa2.75□□□□□ -1.97
USP54-206ENST00000433394 J3QQQ9 107 aa2.75□□□□□ -1.97
USP54-206ENST00000433394 MRPS14O60783 128 aaKnown RBP2.75□□□□□ -1.97
USP54-206ENST00000433394 KLF7O75840 302 aaPredicted RBP2.75□□□□□ -1.97
USP54-206ENST00000433394 MT-ND4LP03901 98 aa2.75□□□□□ -1.97
USP54-206ENST00000433394 ZNF728P0DKX0 622 aa2.75□□□□□ -1.97
USP54-206ENST00000433394 PSMB8P28062 276 aa2.75□□□□□ -1.97
USP54-206ENST00000433394 SDC2P34741 201 aa2.75□□□□□ -1.97
USP54-206ENST00000433394 ZNF93P35789 620 aaPredicted RBP2.75□□□□□ -1.97
USP54-206ENST00000433394 ZNF90Q03938 601 aa2.75□□□□□ -1.97
USP54-206ENST00000433394 FOXF1Q12946 379 aa2.75□□□□□ -1.97
USP54-206ENST00000433394 MIAQ16674 131 aa2.75□□□□□ -1.97
USP54-206ENST00000433394 LGALS9BQ3B8N2 356 aa2.75□□□□□ -1.97
USP54-206ENST00000433394 Q6ZS49 121 aa2.75□□□□□ -1.97
USP54-206ENST00000433394 TRAPPC6BQ86SZ2 158 aa2.75□□□□□ -1.97
USP54-206ENST00000433394 SVBPQ8N300 66 aa2.75□□□□□ -1.97
USP54-206ENST00000433394 C5orf17Q8NAS9 161 aa2.75□□□□□ -1.97
USP54-206ENST00000433394 COPS9Q8WXC6 57 aa2.75□□□□□ -1.97
USP54-206ENST00000433394 C2orf50Q96LR7 162 aa2.75□□□□□ -1.97
USP54-206ENST00000433394 Q9BRP9 147 aa2.75□□□□□ -1.97
USP54-206ENST00000433394 BET1LQ9NYM9 111 aa2.75□□□□□ -1.97
USP54-206ENST00000433394 FUT9Q9Y231 359 aa2.75□□□□□ -1.97
USP54-206ENST00000433394 AMMECR1Q9Y4X0 333 aaPredicted RBP2.75□□□□□ -1.97
USP54-206ENST00000433394 TIMM9Q9Y5J7 89 aa2.75□□□□□ -1.97
USP54-206ENST00000433394 CACNA1GO43497 2377 aa2.75□□□□□ -1.97
USP54-206ENST00000433394 USP34Q70CQ2 3546 aa2.75□□□□□ -1.97
USP54-206ENST00000433394 HEATR5AQ86XA9 2040 aa2.75□□□□□ -1.97
USP54-206ENST00000433394 CFAP54Q96N23 3096 aa2.74□□□□□ -1.97
USP54-206ENST00000433394 CHD8Q9HCK8 2581 aa2.74□□□□□ -1.97
USP54-206ENST00000433394 NCKAP5O14513 1909 aa2.74□□□□□ -1.97
USP54-206ENST00000433394 MPDZO75970 2070 aa2.74□□□□□ -1.97
USP54-206ENST00000433394 LOC100130705A0A1B0GUX0 176 aa2.74□□□□□ -1.97
USP54-206ENST00000433394 IRGMA1A4Y4 181 aa2.74□□□□□ -1.97
USP54-206ENST00000433394 H7BYZ3 331 aa2.74□□□□□ -1.97
USP54-206ENST00000433394 OR2T1O43869 369 aa2.74□□□□□ -1.97
USP54-206ENST00000433394 MPC2O95563 127 aa2.74□□□□□ -1.97
USP54-206ENST00000433394 STATHP02808 62 aa2.74□□□□□ -1.97
USP54-206ENST00000433394 ZNF705DP0CH99 300 aaPredicted RBP2.74□□□□□ -1.97
USP54-206ENST00000433394 P0DMU3 169 aa2.74□□□□□ -1.97
USP54-206ENST00000433394 FAM231AP0DMU4 169 aa2.74□□□□□ -1.97
USP54-206ENST00000433394 FAM231CP0DMU5 169 aa2.74□□□□□ -1.97
USP54-206ENST00000433394 CCL4P13236 92 aa2.74□□□□□ -1.97
USP54-206ENST00000433394 NFYBP25208 207 aa2.74□□□□□ -1.97
USP54-206ENST00000433394 CSN1S1P47710 185 aa2.74□□□□□ -1.97
USP54-206ENST00000433394 BTG2P78543 158 aa2.74□□□□□ -1.97
USP54-206ENST00000433394 LCN15Q6UWW0 184 aa2.74□□□□□ -1.97
USP54-206ENST00000433394 IZUMO2Q6UXV1 221 aa2.74□□□□□ -1.97
USP54-206ENST00000433394 ZNF705AQ6ZN79 300 aaPredicted RBP2.74□□□□□ -1.97
USP54-206ENST00000433394 TTC9CQ8N5M4 171 aa2.74□□□□□ -1.97
USP54-206ENST00000433394 OR5D16Q8NGK9 328 aa2.74□□□□□ -1.97
USP54-206ENST00000433394 SGMS2Q8NHU3 365 aa2.74□□□□□ -1.97
USP54-206ENST00000433394 CIB3Q96Q77 187 aaPredicted RBP2.74□□□□□ -1.97
USP54-206ENST00000433394 S100A13Q99584 98 aa2.74□□□□□ -1.97
USP54-206ENST00000433394 C11orf68Q9H3H3 251 aaKnown RBP2.74□□□□□ -1.97
USP54-206ENST00000433394 TMEM106BQ9NUM4 274 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms