RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 RRN3P1Q2M238 152 aa9□□□□□ -0.97
TRIM39-207ENST00000428404 KCNIP4Q6PIL6 250 aa9□□□□□ -0.97
TRIM39-207ENST00000428404 OR11H2Q8NH07 326 aa9□□□□□ -0.97
TRIM39-207ENST00000428404 IL17DQ8TAD2 202 aa9□□□□□ -0.97
TRIM39-207ENST00000428404 PGLYRP4Q96LB8 373 aa9□□□□□ -0.97
TRIM39-207ENST00000428404 GSN-AS1Q9NRJ2 163 aa9□□□□□ -0.97
TRIM39-207ENST00000428404 URGCP-MRPS24S4R325 110 aa9□□□□□ -0.97
TRIM39-207ENST00000428404 TRBV24-1A0A075B6N3 115 aa8.99□□□□□ -0.97
TRIM39-207ENST00000428404 NXPH4O95158 308 aa8.99□□□□□ -0.97
TRIM39-207ENST00000428404 ZNF415Q09FC8 603 aa8.99□□□□□ -0.97
TRIM39-207ENST00000428404 PTH2Q96A98 100 aa8.99□□□□□ -0.97
TRIM39-207ENST00000428404 C16orf74Q96GX8 76 aa8.99□□□□□ -0.97
TRIM39-207ENST00000428404 BTF3L4Q96K17 158 aa8.99□□□□□ -0.97
TRIM39-207ENST00000428404 TM2D3Q9BRN9 247 aa8.99□□□□□ -0.97
TRIM39-207ENST00000428404 SPXQ9BT56 116 aa8.99□□□□□ -0.97
TRIM39-207ENST00000428404 TENM3Q9P273 2699 aa8.98□□□□□ -0.97
TRIM39-207ENST00000428404 A0A1B0GUT8 65 aa8.98□□□□□ -0.97
TRIM39-207ENST00000428404 A0A1B0GXF2 115 aa8.98□□□□□ -0.97
TRIM39-207ENST00000428404 DAZ2Q13117 558 aaKnown RBP8.98□□□□□ -0.97
TRIM39-207ENST00000428404 Q8NAQ8 132 aa8.98□□□□□ -0.97
TRIM39-207ENST00000428404 OR10AG1Q8NH19 301 aa8.98□□□□□ -0.97
TRIM39-207ENST00000428404 MRAPQ8TCY5 172 aa8.98□□□□□ -0.97
TRIM39-207ENST00000428404 TPPP3Q9BW30 176 aa8.98□□□□□ -0.97
TRIM39-207ENST00000428404 MUC4Q99102 2169 aa8.97□□□□□ -0.97
TRIM39-207ENST00000428404 DNAH9Q9NYC9 4486 aa8.97□□□□□ -0.97
TRIM39-207ENST00000428404 TGIF2-C20orf24A0A0A6YYL0 155 aa8.97□□□□□ -0.97
TRIM39-207ENST00000428404 COLCA2A8K830 154 aa8.97□□□□□ -0.97
TRIM39-207ENST00000428404 MIFP14174 115 aa8.97□□□□□ -0.97
TRIM39-207ENST00000428404 NTF3P20783 257 aa8.97□□□□□ -0.97
TRIM39-207ENST00000428404 CACNG7P62955 275 aa8.97□□□□□ -0.97
TRIM39-207ENST00000428404 PIK3CD-AS1Q5SR53 167 aa8.97□□□□□ -0.97
TRIM39-207ENST00000428404 ATP5L2Q7Z4Y8 100 aa8.97□□□□□ -0.97
TRIM39-207ENST00000428404 RETNQ9HD89 108 aa8.97□□□□□ -0.97
TRIM39-207ENST00000428404 PHLDA3Q9Y5J5 127 aa8.97□□□□□ -0.97
TRIM39-207ENST00000428404 TIMM8BQ9Y5J9 83 aaPredicted RBP8.97□□□□□ -0.97
TRIM39-207ENST00000428404 MUC21A0A0G2JKD1 596 aa8.96□□□□□ -0.98
TRIM39-207ENST00000428404 MUC21A0A140T8X8 626 aa8.96□□□□□ -0.98
TRIM39-207ENST00000428404 M0R2P5 195 aa8.96□□□□□ -0.98
TRIM39-207ENST00000428404 SPINK4O60575 86 aa8.96□□□□□ -0.98
TRIM39-207ENST00000428404 RIGQ13278 110 aa8.96□□□□□ -0.98
TRIM39-207ENST00000428404 DMRTA1Q5VZB9 504 aa8.96□□□□□ -0.98
TRIM39-207ENST00000428404 RASL10AQ92737 203 aa8.96□□□□□ -0.98
TRIM39-207ENST00000428404 MSRB1Q9NZV6 116 aa8.96□□□□□ -0.98
TRIM39-207ENST00000428404 HUWE1Q7Z6Z7 4374 aaKnown RBP8.95□□□□□ -0.98
TRIM39-207ENST00000428404 IGHV4-28A0A0C4DH34 117 aa8.95□□□□□ -0.98
TRIM39-207ENST00000428404 A0A1B0GW15 77 aa8.95□□□□□ -0.98
TRIM39-207ENST00000428404 DEFA6Q01524 100 aa8.95□□□□□ -0.98
TRIM39-207ENST00000428404 LGALS9BQ3B8N2 356 aa8.95□□□□□ -0.98
TRIM39-207ENST00000428404 SPANXN1Q5VSR9 72 aa8.95□□□□□ -0.98
TRIM39-207ENST00000428404 MRPL54Q6P161 138 aaKnown RBP8.95□□□□□ -0.98
TRIM39-207ENST00000428404 RASL11AQ6T310 242 aa8.95□□□□□ -0.98
TRIM39-207ENST00000428404 ZFP82Q8N141 532 aa8.95□□□□□ -0.98
TRIM39-207ENST00000428404 BORCS7Q96B45 105 aa8.95□□□□□ -0.98
TRIM39-207ENST00000428404 FAM210BQ96KR6 192 aa8.95□□□□□ -0.98
TRIM39-207ENST00000428404 B9D2Q9BPU9 175 aa8.95□□□□□ -0.98
TRIM39-207ENST00000428404 SPATA25Q9BR10 227 aa8.95□□□□□ -0.98
TRIM39-207ENST00000428404 PRKDCP78527 4128 aaKnown RBP8.95□□□□□ -0.98
TRIM39-207ENST00000428404 SNURFLB1AK76 121 aa8.94□□□□□ -0.98
TRIM39-207ENST00000428404 TWIST1Q15672 202 aa8.94□□□□□ -0.98
TRIM39-207ENST00000428404 ZNF876PQ49A33 203 aa8.94□□□□□ -0.98
TRIM39-207ENST00000428404 LINC00612Q8N6U2 182 aa8.94□□□□□ -0.98
TRIM39-207ENST00000428404 GATD1Q8NB37 220 aa8.94□□□□□ -0.98
TRIM39-207ENST00000428404 NDUFAF3Q9BU61 184 aa8.94□□□□□ -0.98
TRIM39-207ENST00000428404 NOP10Q9NPE3 64 aaKnown RBP8.94□□□□□ -0.98
TRIM39-207ENST00000428404 COL7A1Q02388 2944 aa8.93□□□□□ -0.98
TRIM39-207ENST00000428404 M0R381 172 aa8.93□□□□□ -0.98
TRIM39-207ENST00000428404 SSTP61278 116 aa8.93□□□□□ -0.98
TRIM39-207ENST00000428404 HBBP68871 147 aa8.93□□□□□ -0.98
TRIM39-207ENST00000428404 SYT8Q8NBV8 401 aa8.93□□□□□ -0.98
TRIM39-207ENST00000428404 LYRM9A8MSI8 78 aa8.92□□□□□ -0.98
TRIM39-207ENST00000428404 S100A8P05109 93 aa8.92□□□□□ -0.98
TRIM39-207ENST00000428404 CAMPP49913 170 aa8.92□□□□□ -0.98
TRIM39-207ENST00000428404 COX19Q49B96 90 aa8.92□□□□□ -0.98
TRIM39-207ENST00000428404 TMEM136Q6ZRR5 245 aa8.92□□□□□ -0.98
TRIM39-207ENST00000428404 Q6ZTI0 123 aa8.92□□□□□ -0.98
TRIM39-207ENST00000428404 GNB1LQ9BYB4 327 aa8.92□□□□□ -0.98
TRIM39-207ENST00000428404 TMEM191AQ9H0A3 160 aa8.92□□□□□ -0.98
TRIM39-207ENST00000428404 C11orf68Q9H3H3 251 aaKnown RBP8.92□□□□□ -0.98
TRIM39-207ENST00000428404 MRPL16Q9NX20 251 aaKnown RBP8.92□□□□□ -0.98
TRIM39-207ENST00000428404 DKK2Q9UBU2 259 aa8.92□□□□□ -0.98
TRIM39-207ENST00000428404 KIF25-AS1Q9Y6Z4 181 aa8.92□□□□□ -0.98
TRIM39-207ENST00000428404 TRGV1A0A0A0MS02 117 aa8.91□□□□□ -0.98
TRIM39-207ENST00000428404 DEFB4AO15263 64 aa8.91□□□□□ -0.98
TRIM39-207ENST00000428404 CRYGDP07320 174 aa8.91□□□□□ -0.98
TRIM39-207ENST00000428404 RAB5AP20339 215 aa8.91□□□□□ -0.98
TRIM39-207ENST00000428404 EVI2AP22794 236 aa8.91□□□□□ -0.98
TRIM39-207ENST00000428404 EMP1P54849 157 aa8.91□□□□□ -0.98
TRIM39-207ENST00000428404 LINC00315P59091 139 aa8.91□□□□□ -0.98
TRIM39-207ENST00000428404 POM121L12Q8N7R1 296 aa8.91□□□□□ -0.98
TRIM39-207ENST00000428404 C18orf15Q96N68 181 aa8.91□□□□□ -0.98
TRIM39-207ENST00000428404 JPT2Q9H910 190 aa8.91□□□□□ -0.98
TRIM39-207ENST00000428404 FBN3Q75N90 2809 aa8.91□□□□□ -0.98
TRIM39-207ENST00000428404 A8MWV9 139 aa8.9□□□□□ -0.98
TRIM39-207ENST00000428404 TRGC1P0CF51 173 aa8.9□□□□□ -0.98
TRIM39-207ENST00000428404 FAM222AQ5U5X8 452 aa8.9□□□□□ -0.98
TRIM39-207ENST00000428404 CFAP126Q5VTH2 177 aa8.9□□□□□ -0.98
TRIM39-207ENST00000428404 UFSP1Q6NVU6 142 aa8.9□□□□□ -0.98
TRIM39-207ENST00000428404 C14orf178Q8N769 122 aaPredicted RBP8.9□□□□□ -0.98
TRIM39-207ENST00000428404 ZMAT4Q9H898 229 aa8.9□□□□□ -0.98
TRIM39-207ENST00000428404 STAB2Q8WWQ8 2551 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms