RNA–Protein interactions for RNA: ENST00000412923.6

PCDH18-202, Transcript of protocadherin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH18, Length 5,102 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-202ENST00000412923 IGHV1-2P23083 117 aa4.82□□□□□ -1.64
PCDH18-202ENST00000412923 C9orf116Q5BN46 136 aaPredicted RBP4.82□□□□□ -1.64
PCDH18-202ENST00000412923 LINC00308Q8TCZ7 52 aa4.82□□□□□ -1.64
PCDH18-202ENST00000412923 RBM12B-AS1Q9P1G2 102 aa4.82□□□□□ -1.64
PCDH18-202ENST00000412923 NDUFA4L2Q9NRX3 87 aa4.82□□□□□ -1.64
PCDH18-202ENST00000412923 COL18A1P39060 1754 aa4.81□□□□□ -1.64
PCDH18-202ENST00000412923 SPTBP11277 2137 aa4.81□□□□□ -1.64
PCDH18-202ENST00000412923 C1orf158Q8N1D5 194 aa4.81□□□□□ -1.64
PCDH18-202ENST00000412923 IGHV3OR16-13A0A075B7E8 117 aa4.81□□□□□ -1.64
PCDH18-202ENST00000412923 IGHV3-74A0A0B4J1X5 117 aa4.81□□□□□ -1.64
PCDH18-202ENST00000412923 LRCOL1A6NCL2 159 aa4.81□□□□□ -1.64
PCDH18-202ENST00000412923 XIRP2A4UGR9 3374 aa4.81□□□□□ -1.64
PCDH18-202ENST00000412923 C5orf63A6NC05 138 aa4.81□□□□□ -1.64
PCDH18-202ENST00000412923 Q8N3U1 123 aa4.81□□□□□ -1.64
PCDH18-202ENST00000412923 HHLA3Q9XRX5 114 aa4.81□□□□□ -1.64
PCDH18-202ENST00000412923 RP1L1Q8IWN7 2480 aaPredicted RBP4.81□□□□□ -1.64
PCDH18-202ENST00000412923 MAST2Q6P0Q8 1798 aa4.81□□□□□ -1.64
PCDH18-202ENST00000412923 SHROOM3Q8TF72 1996 aa4.81□□□□□ -1.64
PCDH18-202ENST00000412923 LY75O60449 1722 aa4.81□□□□□ -1.64
PCDH18-202ENST00000412923 A0A087WVE0 104 aa4.81□□□□□ -1.64
PCDH18-202ENST00000412923 MSMBP08118 114 aa4.81□□□□□ -1.64
PCDH18-202ENST00000412923 GRNP28799 593 aaKnown RBP4.81□□□□□ -1.64
PCDH18-202ENST00000412923 CISD3P0C7P0 127 aa4.8□□□□□ -1.64
PCDH18-202ENST00000412923 SPINT4Q6UDR6 99 aa4.8□□□□□ -1.64
PCDH18-202ENST00000412923 LRP5O75197 1615 aa4.8□□□□□ -1.64
PCDH18-202ENST00000412923 IGHV1-18A0A0C4DH31 117 aa4.8□□□□□ -1.64
PCDH18-202ENST00000412923 IGHV7-4-1A0A0J9YVY3 117 aa4.8□□□□□ -1.64
PCDH18-202ENST00000412923 LINC00473A8K010 186 aa4.8□□□□□ -1.64
PCDH18-202ENST00000412923 ITLN2Q8WWU7 325 aaPredicted RBP4.8□□□□□ -1.64
PCDH18-202ENST00000412923 RNF185Q96GF1 192 aa4.8□□□□□ -1.64
PCDH18-202ENST00000412923 MYO7AQ13402 2215 aa4.8□□□□□ -1.64
PCDH18-202ENST00000412923 SPAG17Q6Q759 2223 aa4.8□□□□□ -1.64
PCDH18-202ENST00000412923 TRBV6-8A0A0A6YYG3 113 aa4.8□□□□□ -1.64
PCDH18-202ENST00000412923 TRBV6-5A0A0K0K1A5 114 aa4.8□□□□□ -1.64
PCDH18-202ENST00000412923 MIR7-3HGQ8N6C7 128 aa4.8□□□□□ -1.64
PCDH18-202ENST00000412923 LINC01465Q8N7H1 131 aa4.8□□□□□ -1.64
PCDH18-202ENST00000412923 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.8□□□□□ -1.64
PCDH18-202ENST00000412923 IGHV3-49A0A0A0MS15 119 aa4.8□□□□□ -1.64
PCDH18-202ENST00000412923 IGKV1-39P01597 117 aa4.8□□□□□ -1.64
PCDH18-202ENST00000412923 IGKV1D-39P04432 117 aa4.8□□□□□ -1.64
PCDH18-202ENST00000412923 Q6ZQY7 126 aa4.8□□□□□ -1.64
PCDH18-202ENST00000412923 MUC7Q8TAX7 377 aa4.8□□□□□ -1.64
PCDH18-202ENST00000412923 PRO0461Q9UI25 63 aa4.8□□□□□ -1.64
PCDH18-202ENST00000412923 TP53BP1Q12888 1972 aaPredicted RBP4.8□□□□□ -1.64
PCDH18-202ENST00000412923 LAMB2P55268 1798 aa4.79□□□□□ -1.64
PCDH18-202ENST00000412923 TRGV1A0A0A0MS02 117 aa4.79□□□□□ -1.64
PCDH18-202ENST00000412923 IGHV3-35A0A0C4DH35 117 aa4.79□□□□□ -1.64
PCDH18-202ENST00000412923 DKK1O94907 266 aa4.79□□□□□ -1.64
PCDH18-202ENST00000412923 IGHV3-23P01764 117 aa4.79□□□□□ -1.64
PCDH18-202ENST00000412923 HILS1P60008 231 aa4.79□□□□□ -1.64
PCDH18-202ENST00000412923 ZNF837Q96EG3 531 aaPredicted RBP4.79□□□□□ -1.64
PCDH18-202ENST00000412923 C11orf1Q9H5F2 150 aa4.79□□□□□ -1.64
PCDH18-202ENST00000412923 ITGB4P16144 1822 aa4.79□□□□□ -1.64
PCDH18-202ENST00000412923 C20orf203Q8NBC4 194 aa4.79□□□□□ -1.64
PCDH18-202ENST00000412923 USMG5Q96IX5 58 aa4.79□□□□□ -1.64
PCDH18-202ENST00000412923 ZNF581Q9P0T4 197 aa4.79□□□□□ -1.64
PCDH18-202ENST00000412923 KIAA1551Q9HCM1 1747 aa4.79□□□□□ -1.64
PCDH18-202ENST00000412923 IBA57-AS1B1ANH7 110 aa4.79□□□□□ -1.64
PCDH18-202ENST00000412923 LMO7DNF2Z398 122 aa4.79□□□□□ -1.64
PCDH18-202ENST00000412923 C20orf204Q6ZNR8 217 aa4.79□□□□□ -1.64
PCDH18-202ENST00000412923 STRCQ7RTU9 1775 aa4.79□□□□□ -1.64
PCDH18-202ENST00000412923 DOCK11Q5JSL3 2073 aa4.78□□□□□ -1.64
PCDH18-202ENST00000412923 KNL1Q8NG31 2342 aa4.78□□□□□ -1.64
PCDH18-202ENST00000412923 LINC01565O15544 149 aa4.78□□□□□ -1.64
PCDH18-202ENST00000412923 ELOF1P60002 83 aaKnown RBP4.78□□□□□ -1.64
PCDH18-202ENST00000412923 XAGE1AQ9HD64 81 aa4.78□□□□□ -1.64
PCDH18-202ENST00000412923 IGHV3-73A0A0B4J1V6 119 aa4.78□□□□□ -1.64
PCDH18-202ENST00000412923 IGKV1D-43A0A0B4J1Z2 117 aa4.78□□□□□ -1.64
PCDH18-202ENST00000412923 SPTY2D1-AS1A0A0U1RR47 76 aa4.78□□□□□ -1.64
PCDH18-202ENST00000412923 H0Y9J4 135 aa4.78□□□□□ -1.64
PCDH18-202ENST00000412923 NHLRC4P0CG21 123 aaPredicted RBP4.78□□□□□ -1.64
PCDH18-202ENST00000412923 DEFB105AQ8NG35 78 aa4.78□□□□□ -1.64
PCDH18-202ENST00000412923 C1orf147Q96MC9 270 aaPredicted RBP4.78□□□□□ -1.64
PCDH18-202ENST00000412923 MTCL1Q9Y4B5 1905 aaKnown RBP4.78□□□□□ -1.64
PCDH18-202ENST00000412923 A0A087WZ39 114 aa4.78□□□□□ -1.64
PCDH18-202ENST00000412923 PAPPA2Q9BXP8 1791 aa4.77□□□□□ -1.65
PCDH18-202ENST00000412923 DLEC1Q9Y238 1755 aa4.77□□□□□ -1.65
PCDH18-202ENST00000412923 ARFGEF1Q9Y6D6 1849 aa4.77□□□□□ -1.65
PCDH18-202ENST00000412923 BUB1B-PAK6H3BSN5 160 aa4.77□□□□□ -1.65
PCDH18-202ENST00000412923 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.77□□□□□ -1.65
PCDH18-202ENST00000412923 PIP4P1Q86T03 277 aa4.77□□□□□ -1.65
PCDH18-202ENST00000412923 PDCD11Q14690 1871 aaKnown RBP4.77□□□□□ -1.65
PCDH18-202ENST00000412923 FOXS1O43638 330 aa4.77□□□□□ -1.65
PCDH18-202ENST00000412923 RSPO1Q2MKA7 263 aaPredicted RBP4.77□□□□□ -1.65
PCDH18-202ENST00000412923 MINOS1Q5TGZ0 78 aa4.77□□□□□ -1.65
PCDH18-202ENST00000412923 NUP214P35658 2090 aaPredicted RBP4.77□□□□□ -1.65
PCDH18-202ENST00000412923 PIKFYVEQ9Y2I7 2098 aa4.77□□□□□ -1.65
PCDH18-202ENST00000412923 TAF1LQ8IZX4 1826 aa4.77□□□□□ -1.65
PCDH18-202ENST00000412923 IGKV1-27A0A075B6S5 117 aa4.77□□□□□ -1.65
PCDH18-202ENST00000412923 GDF5OSQ5U4N7 250 aa4.77□□□□□ -1.65
PCDH18-202ENST00000412923 NTM-AS1Q6ZSK4 140 aa4.77□□□□□ -1.65
PCDH18-202ENST00000412923 TM2D3Q9BRN9 247 aa4.77□□□□□ -1.65
PCDH18-202ENST00000412923 RNASE3P12724 160 aaKnown RBP4.77□□□□□ -1.65
PCDH18-202ENST00000412923 C11orf53Q8IXP5 236 aa4.77□□□□□ -1.65
PCDH18-202ENST00000412923 MDS2Q8NDY4 140 aa4.77□□□□□ -1.65
PCDH18-202ENST00000412923 ARRDC1-AS1Q9H2J1 176 aa4.77□□□□□ -1.65
PCDH18-202ENST00000412923 NRAPQ86VF7 1730 aa4.77□□□□□ -1.65
PCDH18-202ENST00000412923 F5P12259 2224 aa4.77□□□□□ -1.65
PCDH18-202ENST00000412923 SPINK2P20155 84 aa4.76□□□□□ -1.65
PCDH18-202ENST00000412923 ZNF491Q8N8L2 437 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms