RNA–Protein interactions for RNA: ENST00000397644.2

LINC00887-201, long intergenic non-protein coding RNA 887, humanhuman

TSL 5

Gene LINC00887, Length 416 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-201ENST00000397644 TRGV11A0A075B6L2 103 aa5.52□□□□□ -1.53
LINC00887-201ENST00000397644 A0A087WWC5 75 aa5.52□□□□□ -1.53
LINC00887-201ENST00000397644 SMIM9A6NGZ8 99 aa5.52□□□□□ -1.53
LINC00887-201ENST00000397644 TNFRSF6BO95407 300 aa5.52□□□□□ -1.53
LINC00887-201ENST00000397644 AZU1P20160 251 aa5.52□□□□□ -1.53
LINC00887-201ENST00000397644 S100PP25815 95 aa5.52□□□□□ -1.53
LINC00887-201ENST00000397644 ASIPP42127 132 aa5.52□□□□□ -1.53
LINC00887-201ENST00000397644 FAM3BP58499 235 aaPredicted RBP5.52□□□□□ -1.53
LINC00887-201ENST00000397644 RRN3P1Q2M238 152 aa5.52□□□□□ -1.53
LINC00887-201ENST00000397644 DEFB135Q30KP9 77 aa5.52□□□□□ -1.53
LINC00887-201ENST00000397644 TDRG1Q3Y452 100 aa5.52□□□□□ -1.53
LINC00887-201ENST00000397644 SBSPONQ8IVN8 264 aa5.52□□□□□ -1.53
LINC00887-201ENST00000397644 TSKUQ8WUA8 353 aa5.52□□□□□ -1.53
LINC00887-201ENST00000397644 RNF183Q96D59 192 aa5.52□□□□□ -1.53
LINC00887-201ENST00000397644 PGLYRP4Q96LB8 373 aa5.52□□□□□ -1.53
LINC00887-201ENST00000397644 LINC00467Q9BRT7 94 aa5.52□□□□□ -1.53
LINC00887-201ENST00000397644 TPPP3Q9BW30 176 aa5.52□□□□□ -1.53
LINC00887-201ENST00000397644 KRTAP4-9Q9BYQ8 210 aa5.52□□□□□ -1.53
LINC00887-201ENST00000397644 IL36BQ9NZH7 164 aa5.52□□□□□ -1.53
LINC00887-201ENST00000397644 A0A087WWL8 130 aa5.51□□□□□ -1.53
LINC00887-201ENST00000397644 A0A1W2PPQ1 181 aa5.51□□□□□ -1.53
LINC00887-201ENST00000397644 FAM231BA6NCW3 169 aa5.51□□□□□ -1.53
LINC00887-201ENST00000397644 F2Z2F3 143 aa5.51□□□□□ -1.53
LINC00887-201ENST00000397644 TYMSP04818 313 aa5.51□□□□□ -1.53
LINC00887-201ENST00000397644 ARMS2P0C7Q2 107 aa5.51□□□□□ -1.53
LINC00887-201ENST00000397644 MED14OSP0DP75 135 aa5.51□□□□□ -1.53
LINC00887-201ENST00000397644 TCL1AP56279 114 aa5.51□□□□□ -1.53
LINC00887-201ENST00000397644 KCNIP4Q6PIL6 250 aa5.51□□□□□ -1.53
LINC00887-201ENST00000397644 LYZL1Q6UWQ5 148 aa5.51□□□□□ -1.53
LINC00887-201ENST00000397644 ZNF705AQ6ZN79 300 aaPredicted RBP5.51□□□□□ -1.53
LINC00887-201ENST00000397644 ZNF493Q6ZR52 646 aa5.51□□□□□ -1.53
LINC00887-201ENST00000397644 ZNF575Q86XF7 245 aa5.51□□□□□ -1.53
LINC00887-201ENST00000397644 BORCS7Q96B45 105 aa5.51□□□□□ -1.53
LINC00887-201ENST00000397644 IMMP2LQ96T52 175 aa5.51□□□□□ -1.53
LINC00887-201ENST00000397644 NEU1Q99519 415 aa5.51□□□□□ -1.53
LINC00887-201ENST00000397644 GSN-AS1Q9NRJ2 163 aa5.51□□□□□ -1.53
LINC00887-201ENST00000397644 MDFICQ9P1T7 246 aa5.51□□□□□ -1.53
LINC00887-201ENST00000397644 NAT8BQ9UHF3 227 aa5.51□□□□□ -1.53
LINC00887-201ENST00000397644 IGHV3-16A0A0C4DH30 117 aa5.5□□□□□ -1.53
LINC00887-201ENST00000397644 MUC21A0A0G2JKD1 596 aa5.5□□□□□ -1.53
LINC00887-201ENST00000397644 MUC21A0A140T8X8 626 aa5.5□□□□□ -1.53
LINC00887-201ENST00000397644 SMIM27A0A1W2PRY6 76 aa5.5□□□□□ -1.53
LINC00887-201ENST00000397644 CXorf65A6NEN9 183 aa5.5□□□□□ -1.53
LINC00887-201ENST00000397644 PRSS47A8MTI9 375 aa5.5□□□□□ -1.53
LINC00887-201ENST00000397644 KRTAP9-7A8MTY7 169 aa5.5□□□□□ -1.53
LINC00887-201ENST00000397644 SNURFLB1AK76 121 aa5.5□□□□□ -1.53
LINC00887-201ENST00000397644 SPINK4O60575 86 aa5.5□□□□□ -1.53
LINC00887-201ENST00000397644 BTF3P20290 206 aaKnown RBP5.5□□□□□ -1.53
LINC00887-201ENST00000397644 EMP1P54849 157 aa5.5□□□□□ -1.53
LINC00887-201ENST00000397644 FOXA3P55318 350 aaPredicted RBP5.5□□□□□ -1.53
LINC00887-201ENST00000397644 DNLZQ5SXM8 178 aa5.5□□□□□ -1.53
LINC00887-201ENST00000397644 FER1L6-AS1Q8NA97 138 aa5.5□□□□□ -1.53
LINC00887-201ENST00000397644 NUP35Q8NFH5 326 aa5.5□□□□□ -1.53
LINC00887-201ENST00000397644 GTSF1Q8WW33 167 aa5.5□□□□□ -1.53
LINC00887-201ENST00000397644 OVOL2Q9BRP0 275 aa5.5□□□□□ -1.53
LINC00887-201ENST00000397644 SPXQ9BT56 116 aa5.5□□□□□ -1.53
LINC00887-201ENST00000397644 GFRA4Q9GZZ7 299 aa5.5□□□□□ -1.53
LINC00887-201ENST00000397644 SMCO4Q9NRQ5 59 aa5.5□□□□□ -1.53
LINC00887-201ENST00000397644 TP53TG1Q9Y2A0 90 aa5.5□□□□□ -1.53
LINC00887-201ENST00000397644 PHLDA3Q9Y5J5 127 aa5.5□□□□□ -1.53
LINC00887-201ENST00000397644 URGCP-MRPS24S4R325 110 aa5.5□□□□□ -1.53
LINC00887-201ENST00000397644 HIGD1CA8MV81 97 aa5.49□□□□□ -1.53
LINC00887-201ENST00000397644 H3BVH4 76 aa5.49□□□□□ -1.53
LINC00887-201ENST00000397644 CXCL1P09341 107 aa5.49□□□□□ -1.53
LINC00887-201ENST00000397644 RNASE3P12724 160 aaKnown RBP5.49□□□□□ -1.53
LINC00887-201ENST00000397644 MIFP14174 115 aa5.49□□□□□ -1.53
LINC00887-201ENST00000397644 NTF3P20783 257 aa5.49□□□□□ -1.53
LINC00887-201ENST00000397644 ZNF415Q09FC8 603 aa5.49□□□□□ -1.53
LINC00887-201ENST00000397644 SPANXN1Q5VSR9 72 aa5.49□□□□□ -1.53
LINC00887-201ENST00000397644 TMEM263Q8WUH6 116 aaKnown RBP5.49□□□□□ -1.53
LINC00887-201ENST00000397644 C16orf74Q96GX8 76 aa5.49□□□□□ -1.53
LINC00887-201ENST00000397644 SPATA25Q9BR10 227 aa5.49□□□□□ -1.53
LINC00887-201ENST00000397644 A0A1B0GUT8 65 aa5.48□□□□□ -1.53
LINC00887-201ENST00000397644 DEFB4AO15263 64 aa5.48□□□□□ -1.53
LINC00887-201ENST00000397644 SCO1O75880 301 aa5.48□□□□□ -1.53
LINC00887-201ENST00000397644 PLA2G1BP04054 148 aaKnown RBP5.48□□□□□ -1.53
LINC00887-201ENST00000397644 OR5AL1P0C617 328 aa5.48□□□□□ -1.53
LINC00887-201ENST00000397644 IGLC6P0CF74 106 aa5.48□□□□□ -1.53
LINC00887-201ENST00000397644 LINC00310P59036 64 aa5.48□□□□□ -1.53
LINC00887-201ENST00000397644 CACNG7P62955 275 aa5.48□□□□□ -1.53
LINC00887-201ENST00000397644 RIGQ13278 110 aa5.48□□□□□ -1.53
LINC00887-201ENST00000397644 TWIST1Q15672 202 aa5.48□□□□□ -1.53
LINC00887-201ENST00000397644 ZNF876PQ49A33 203 aa5.48□□□□□ -1.53
LINC00887-201ENST00000397644 WDR73Q6P4I2 378 aa5.48□□□□□ -1.53
LINC00887-201ENST00000397644 TMEM88Q6PEY1 159 aa5.48□□□□□ -1.53
LINC00887-201ENST00000397644 SYT8Q8NBV8 401 aa5.48□□□□□ -1.53
LINC00887-201ENST00000397644 BTF3L4Q96K17 158 aa5.48□□□□□ -1.53
LINC00887-201ENST00000397644 RETNQ9HD89 108 aa5.48□□□□□ -1.53
LINC00887-201ENST00000397644 NOP10Q9NPE3 64 aaKnown RBP5.48□□□□□ -1.53
LINC00887-201ENST00000397644 COL7A1Q02388 2944 aa5.48□□□□□ -1.53
LINC00887-201ENST00000397644 DNAH9Q9NYC9 4486 aa5.48□□□□□ -1.53
LINC00887-201ENST00000397644 IGHV4-28A0A0C4DH34 117 aa5.47□□□□□ -1.53
LINC00887-201ENST00000397644 M0R2P5 195 aa5.47□□□□□ -1.53
LINC00887-201ENST00000397644 M0R381 172 aa5.47□□□□□ -1.53
LINC00887-201ENST00000397644 SNAI2O43623 268 aa5.47□□□□□ -1.53
LINC00887-201ENST00000397644 NHLRC4P0CG21 123 aaPredicted RBP5.47□□□□□ -1.53
LINC00887-201ENST00000397644 GAGE13Q4V321 117 aa5.47□□□□□ -1.53
LINC00887-201ENST00000397644 MRPL54Q6P161 138 aaKnown RBP5.47□□□□□ -1.53
LINC00887-201ENST00000397644 CFAP161Q6P656 301 aa5.47□□□□□ -1.53
LINC00887-201ENST00000397644 SMIM15Q7Z3B0 74 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms