RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 FAM3BP58499 235 aaPredicted RBP17.02■□□□□ 0.32
TSPAN4-202ENST00000397396 TMEM88Q6PEY1 159 aa17.02■□□□□ 0.32
TSPAN4-202ENST00000397396 CBLN2Q8IUK8 224 aa17.02■□□□□ 0.32
TSPAN4-202ENST00000397396 C11orf72Q8NBR9 251 aa17.02■□□□□ 0.32
TSPAN4-202ENST00000397396 SYT8Q8NBV8 401 aa17.02■□□□□ 0.32
TSPAN4-202ENST00000397396 CNFNQ9BYD5 112 aa17.02■□□□□ 0.32
TSPAN4-202ENST00000397396 MDFICQ9P1T7 246 aa17.02■□□□□ 0.32
TSPAN4-202ENST00000397396 A0A1B0GUT8 65 aa17.01■□□□□ 0.31
TSPAN4-202ENST00000397396 A0A1B0GW15 77 aa17.01■□□□□ 0.31
TSPAN4-202ENST00000397396 SPANXN1Q5VSR9 72 aa17.01■□□□□ 0.31
TSPAN4-202ENST00000397396 ZFP82Q8N141 532 aa17.01■□□□□ 0.31
TSPAN4-202ENST00000397396 OVOL2Q9BRP0 275 aa17.01■□□□□ 0.31
TSPAN4-202ENST00000397396 GSN-AS1Q9NRJ2 163 aa17.01■□□□□ 0.31
TSPAN4-202ENST00000397396 TIMM8BQ9Y5J9 83 aaPredicted RBP17.01■□□□□ 0.31
TSPAN4-202ENST00000397396 S100A8P05109 93 aa17■□□□□ 0.31
TSPAN4-202ENST00000397396 AZU1P20160 251 aa17■□□□□ 0.31
TSPAN4-202ENST00000397396 RIGQ13278 110 aa17■□□□□ 0.31
TSPAN4-202ENST00000397396 SBSPONQ8IVN8 264 aa17■□□□□ 0.31
TSPAN4-202ENST00000397396 PTH2Q96A98 100 aa17■□□□□ 0.31
TSPAN4-202ENST00000397396 NDUFAF3Q9BU61 184 aa17■□□□□ 0.31
TSPAN4-202ENST00000397396 DAZ2Q13117 558 aaKnown RBP16.99■□□□□ 0.31
TSPAN4-202ENST00000397396 ELOBQ15370 118 aa16.99■□□□□ 0.31
TSPAN4-202ENST00000397396 PIK3CD-AS1Q5SR53 167 aa16.99■□□□□ 0.31
TSPAN4-202ENST00000397396 IL17DQ8TAD2 202 aa16.99■□□□□ 0.31
TSPAN4-202ENST00000397396 TM2D3Q9BRN9 247 aa16.99■□□□□ 0.31
TSPAN4-202ENST00000397396 TRBV24-1A0A075B6N3 115 aa16.98■□□□□ 0.31
TSPAN4-202ENST00000397396 IGHV4-4A0A075B6R2 117 aa16.98■□□□□ 0.31
TSPAN4-202ENST00000397396 M0R2P5 195 aa16.98■□□□□ 0.31
TSPAN4-202ENST00000397396 SCO1O75880 301 aa16.98■□□□□ 0.31
TSPAN4-202ENST00000397396 RASL11AQ6T310 242 aa16.98■□□□□ 0.31
TSPAN4-202ENST00000397396 B9D2Q9BPU9 175 aa16.98■□□□□ 0.31
TSPAN4-202ENST00000397396 ZMAT4Q9H898 229 aa16.98■□□□□ 0.31
TSPAN4-202ENST00000397396 COX19Q49B96 90 aa16.97■□□□□ 0.31
TSPAN4-202ENST00000397396 OR10AG1Q8NH19 301 aa16.97■□□□□ 0.31
TSPAN4-202ENST00000397396 NXPH4O95158 308 aa16.96■□□□□ 0.31
TSPAN4-202ENST00000397396 PRM2P04554 102 aa16.96■□□□□ 0.31
TSPAN4-202ENST00000397396 HBBP68871 147 aa16.96■□□□□ 0.31
TSPAN4-202ENST00000397396 DEFA6Q01524 100 aa16.96■□□□□ 0.31
TSPAN4-202ENST00000397396 TEX48A0A1B0GUV7 120 aa16.96■□□□□ 0.3
TSPAN4-202ENST00000397396 M0R381 172 aa16.96■□□□□ 0.3
TSPAN4-202ENST00000397396 TRGC1P0CF51 173 aa16.96■□□□□ 0.3
TSPAN4-202ENST00000397396 LGALS9BQ3B8N2 356 aa16.96■□□□□ 0.3
TSPAN4-202ENST00000397396 Q8NAQ8 132 aa16.96■□□□□ 0.3
TSPAN4-202ENST00000397396 FBN3Q75N90 2809 aa16.95■□□□□ 0.3
TSPAN4-202ENST00000397396 IGHV4-28A0A0C4DH34 117 aa16.95■□□□□ 0.3
TSPAN4-202ENST00000397396 TWIST1Q15672 202 aa16.95■□□□□ 0.3
TSPAN4-202ENST00000397396 ZNF876PQ49A33 203 aa16.95■□□□□ 0.3
TSPAN4-202ENST00000397396 MRPL54Q6P161 138 aaKnown RBP16.95■□□□□ 0.3
TSPAN4-202ENST00000397396 SMIM15Q7Z3B0 74 aa16.95■□□□□ 0.3
TSPAN4-202ENST00000397396 YPEL4Q96NS1 127 aa16.95■□□□□ 0.3
TSPAN4-202ENST00000397396 PLAC8L1A1L4L8 177 aa16.94■□□□□ 0.3
TSPAN4-202ENST00000397396 SPINK4O60575 86 aa16.94■□□□□ 0.3
TSPAN4-202ENST00000397396 NTF3P20783 257 aa16.94■□□□□ 0.3
TSPAN4-202ENST00000397396 AP1S3Q96PC3 154 aa16.94■□□□□ 0.3
TSPAN4-202ENST00000397396 RETNQ9HD89 108 aa16.94■□□□□ 0.3
TSPAN4-202ENST00000397396 A0A1B0GXF2 115 aa16.93■□□□□ 0.3
TSPAN4-202ENST00000397396 LYRM9A8MSI8 78 aa16.93■□□□□ 0.3
TSPAN4-202ENST00000397396 FAM210BQ96KR6 192 aa16.93■□□□□ 0.3
TSPAN4-202ENST00000397396 C11orf68Q9H3H3 251 aaKnown RBP16.93■□□□□ 0.3
TSPAN4-202ENST00000397396 NOP10Q9NPE3 64 aaKnown RBP16.93■□□□□ 0.3
TSPAN4-202ENST00000397396 TGIF2-C20orf24A0A0A6YYL0 155 aa16.92■□□□□ 0.3
TSPAN4-202ENST00000397396 MUC21A0A0G2JKD1 596 aa16.92■□□□□ 0.3
TSPAN4-202ENST00000397396 MUC21A0A140T8X8 626 aa16.92■□□□□ 0.3
TSPAN4-202ENST00000397396 RASL10AQ92737 203 aa16.92■□□□□ 0.3
TSPAN4-202ENST00000397396 TRGV1A0A0A0MS02 117 aa16.91■□□□□ 0.3
TSPAN4-202ENST00000397396 NHLRC4P0CG21 123 aaPredicted RBP16.91■□□□□ 0.3
TSPAN4-202ENST00000397396 EMP1P54849 157 aa16.91■□□□□ 0.3
TSPAN4-202ENST00000397396 DMRTA1Q5VZB9 504 aa16.91■□□□□ 0.3
TSPAN4-202ENST00000397396 A8MWV9 139 aa16.9■□□□□ 0.3
TSPAN4-202ENST00000397396 MT-ND6P03923 174 aa16.89■□□□□ 0.29
TSPAN4-202ENST00000397396 CAMPP49913 170 aa16.89■□□□□ 0.29
TSPAN4-202ENST00000397396 SSTP61278 116 aa16.89■□□□□ 0.29
TSPAN4-202ENST00000397396 GATD1Q8NB37 220 aa16.89■□□□□ 0.29
TSPAN4-202ENST00000397396 MRPL16Q9NX20 251 aaKnown RBP16.89■□□□□ 0.29
TSPAN4-202ENST00000397396 SMIM17P0DL12 118 aa16.88■□□□□ 0.29
TSPAN4-202ENST00000397396 GNB1LQ9BYB4 327 aa16.88■□□□□ 0.29
TSPAN4-202ENST00000397396 TMEM191AQ9H0A3 160 aa16.88■□□□□ 0.29
TSPAN4-202ENST00000397396 COLCA2A8K830 154 aa16.87■□□□□ 0.29
TSPAN4-202ENST00000397396 CIDEAO60543 219 aa16.87■□□□□ 0.29
TSPAN4-202ENST00000397396 HLA-DQA1P01909 254 aa16.87■□□□□ 0.29
TSPAN4-202ENST00000397396 SPART-AS1P0CW21 52 aa16.87■□□□□ 0.29
TSPAN4-202ENST00000397396 RAB4BP61018 213 aa16.86■□□□□ 0.29
TSPAN4-202ENST00000397396 Q6ZTI0 123 aa16.86■□□□□ 0.29
TSPAN4-202ENST00000397396 DPH3P1Q9H4G8 78 aa16.86■□□□□ 0.29
TSPAN4-202ENST00000397396 MSRB1Q9NZV6 116 aa16.86■□□□□ 0.29
TSPAN4-202ENST00000397396 RHODO00212 210 aa16.85■□□□□ 0.29
TSPAN4-202ENST00000397396 FAM222AQ5U5X8 452 aa16.85■□□□□ 0.29
TSPAN4-202ENST00000397396 LINC00612Q8N6U2 182 aa16.85■□□□□ 0.29
TSPAN4-202ENST00000397396 C18orf15Q96N68 181 aa16.85■□□□□ 0.29
TSPAN4-202ENST00000397396 DKK2Q9UBU2 259 aa16.85■□□□□ 0.29
TSPAN4-202ENST00000397396 MUC4Q99102 2169 aa16.84■□□□□ 0.29
TSPAN4-202ENST00000397396 TRGV2A0A075B6R0 118 aa16.84■□□□□ 0.29
TSPAN4-202ENST00000397396 RAB5AP20339 215 aa16.84■□□□□ 0.29
TSPAN4-202ENST00000397396 TRAV4A0A0B4J268 109 aa16.83■□□□□ 0.28
TSPAN4-202ENST00000397396 GAGE12BA1L429 117 aa16.83■□□□□ 0.28
TSPAN4-202ENST00000397396 DEFB4AO15263 64 aa16.83■□□□□ 0.28
TSPAN4-202ENST00000397396 RS1O15537 224 aa16.83■□□□□ 0.28
TSPAN4-202ENST00000397396 GAGE7O76087 117 aa16.83■□□□□ 0.28
TSPAN4-202ENST00000397396 GAGE12FP0CL80 117 aa16.83■□□□□ 0.28
TSPAN4-202ENST00000397396 GAGE12GP0CL81 117 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 942.9 ms