RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 CTRLP40313 264 aa16.5■□□□□ 0.23
HLA-C-202ENST00000376237 DAZ2Q13117 558 aaKnown RBP16.5■□□□□ 0.23
HLA-C-202ENST00000376237 LYZL1Q6UWQ5 148 aa16.5■□□□□ 0.23
HLA-C-202ENST00000376237 RETNQ9HD89 108 aa16.5■□□□□ 0.23
HLA-C-202ENST00000376237 PHLDA3Q9Y5J5 127 aa16.5■□□□□ 0.23
HLA-C-202ENST00000376237 WDR73Q6P4I2 378 aa16.49■□□□□ 0.23
HLA-C-202ENST00000376237 Q8NAQ8 132 aa16.49■□□□□ 0.23
HLA-C-202ENST00000376237 NUP35Q8NFH5 326 aa16.49■□□□□ 0.23
HLA-C-202ENST00000376237 TIMM8BQ9Y5J9 83 aaPredicted RBP16.49■□□□□ 0.23
HLA-C-202ENST00000376237 IGHV4-28A0A0C4DH34 117 aa16.48■□□□□ 0.23
HLA-C-202ENST00000376237 IL17DQ8TAD2 202 aa16.48■□□□□ 0.23
HLA-C-202ENST00000376237 BORCS7Q96B45 105 aa16.48■□□□□ 0.23
HLA-C-202ENST00000376237 PGLYRP4Q96LB8 373 aa16.48■□□□□ 0.23
HLA-C-202ENST00000376237 CNFNQ9BYD5 112 aa16.48■□□□□ 0.23
HLA-C-202ENST00000376237 SMCO4Q9NRQ5 59 aa16.48■□□□□ 0.23
HLA-C-202ENST00000376237 PLAC8L1A1L4L8 177 aa16.47■□□□□ 0.23
HLA-C-202ENST00000376237 NHLRC4P0CG21 123 aaPredicted RBP16.47■□□□□ 0.23
HLA-C-202ENST00000376237 PTH2Q96A98 100 aa16.47■□□□□ 0.23
HLA-C-202ENST00000376237 TRAV9-1A0A075B6T8 112 aa16.46■□□□□ 0.23
HLA-C-202ENST00000376237 M0R2P5 195 aa16.46■□□□□ 0.23
HLA-C-202ENST00000376237 FAM3BP58499 235 aaPredicted RBP16.46■□□□□ 0.23
HLA-C-202ENST00000376237 CACNG7P62955 275 aa16.46■□□□□ 0.23
HLA-C-202ENST00000376237 SYT8Q8NBV8 401 aa16.46■□□□□ 0.23
HLA-C-202ENST00000376237 A0A1B0GUT8 65 aa16.45■□□□□ 0.22
HLA-C-202ENST00000376237 LGALS9BQ3B8N2 356 aa16.45■□□□□ 0.22
HLA-C-202ENST00000376237 PIK3CD-AS1Q5SR53 167 aa16.45■□□□□ 0.22
HLA-C-202ENST00000376237 SPANXN1Q5VSR9 72 aa16.45■□□□□ 0.22
HLA-C-202ENST00000376237 ZFP82Q8N141 532 aa16.45■□□□□ 0.22
HLA-C-202ENST00000376237 BTF3L4Q96K17 158 aa16.45■□□□□ 0.22
HLA-C-202ENST00000376237 IGHV4-4A0A075B6R2 117 aa16.45■□□□□ 0.22
HLA-C-202ENST00000376237 OR10AG1Q8NH19 301 aa16.45■□□□□ 0.22
HLA-C-202ENST00000376237 NDUFAF3Q9BU61 184 aa16.45■□□□□ 0.22
HLA-C-202ENST00000376237 NOP10Q9NPE3 64 aaKnown RBP16.45■□□□□ 0.22
HLA-C-202ENST00000376237 URGCP-MRPS24S4R325 110 aa16.45■□□□□ 0.22
HLA-C-202ENST00000376237 NBEAL2Q6ZNJ1 2754 aa16.45■□□□□ 0.22
HLA-C-202ENST00000376237 EMP1P54849 157 aa16.44■□□□□ 0.22
HLA-C-202ENST00000376237 ZNF876PQ49A33 203 aa16.44■□□□□ 0.22
HLA-C-202ENST00000376237 SPINK4O60575 86 aa16.43■□□□□ 0.22
HLA-C-202ENST00000376237 RIGQ13278 110 aa16.43■□□□□ 0.22
HLA-C-202ENST00000376237 C11orf68Q9H3H3 251 aaKnown RBP16.43■□□□□ 0.22
HLA-C-202ENST00000376237 LYRM9A8MSI8 78 aa16.42■□□□□ 0.22
HLA-C-202ENST00000376237 M0R381 172 aa16.42■□□□□ 0.22
HLA-C-202ENST00000376237 NXPH4O95158 308 aa16.42■□□□□ 0.22
HLA-C-202ENST00000376237 NTF3P20783 257 aa16.42■□□□□ 0.22
HLA-C-202ENST00000376237 DMRTA1Q5VZB9 504 aa16.42■□□□□ 0.22
HLA-C-202ENST00000376237 TMEM88Q6PEY1 159 aa16.42■□□□□ 0.22
HLA-C-202ENST00000376237 ATP5L2Q7Z4Y8 100 aa16.42■□□□□ 0.22
HLA-C-202ENST00000376237 RASL10AQ92737 203 aa16.42■□□□□ 0.22
HLA-C-202ENST00000376237 MEGF8Q7Z7M0 2845 aa16.42■□□□□ 0.22
HLA-C-202ENST00000376237 TEX48A0A1B0GUV7 120 aa16.41■□□□□ 0.22
HLA-C-202ENST00000376237 A0A1B0GW15 77 aa16.41■□□□□ 0.22
HLA-C-202ENST00000376237 CBLN2Q8IUK8 224 aa16.41■□□□□ 0.22
HLA-C-202ENST00000376237 MUC21A0A0G2JKD1 596 aa16.4■□□□□ 0.22
HLA-C-202ENST00000376237 MUC21A0A140T8X8 626 aa16.4■□□□□ 0.22
HLA-C-202ENST00000376237 ELOBQ15370 118 aa16.4■□□□□ 0.22
HLA-C-202ENST00000376237 TWIST1Q15672 202 aa16.4■□□□□ 0.22
HLA-C-202ENST00000376237 TRGV1A0A0A0MS02 117 aa16.4■□□□□ 0.22
HLA-C-202ENST00000376237 DEFB4AO15263 64 aa16.4■□□□□ 0.22
HLA-C-202ENST00000376237 SSTP61278 116 aa16.4■□□□□ 0.22
HLA-C-202ENST00000376237 S100A8P05109 93 aa16.39■□□□□ 0.21
HLA-C-202ENST00000376237 SPART-AS1P0CW21 52 aa16.39■□□□□ 0.21
HLA-C-202ENST00000376237 MRPL16Q9NX20 251 aaKnown RBP16.39■□□□□ 0.21
HLA-C-202ENST00000376237 DKK2Q9UBU2 259 aa16.39■□□□□ 0.21
HLA-C-202ENST00000376237 TRBV24-1A0A075B6N3 115 aa16.38■□□□□ 0.21
HLA-C-202ENST00000376237 SCO1O75880 301 aa16.38■□□□□ 0.21
HLA-C-202ENST00000376237 TRGC1P0CF51 173 aa16.38■□□□□ 0.21
HLA-C-202ENST00000376237 FAM222AQ5U5X8 452 aa16.38■□□□□ 0.21
HLA-C-202ENST00000376237 RASL11AQ6T310 242 aa16.38■□□□□ 0.21
HLA-C-202ENST00000376237 HBBP68871 147 aa16.37■□□□□ 0.21
HLA-C-202ENST00000376237 MRPL54Q6P161 138 aaKnown RBP16.37■□□□□ 0.21
HLA-C-202ENST00000376237 Q6ZTI0 123 aa16.37■□□□□ 0.21
HLA-C-202ENST00000376237 LINC00612Q8N6U2 182 aa16.37■□□□□ 0.21
HLA-C-202ENST00000376237 A0A1B0GXF2 115 aa16.36■□□□□ 0.21
HLA-C-202ENST00000376237 A8MWV9 139 aa16.36■□□□□ 0.21
HLA-C-202ENST00000376237 SMIM15Q7Z3B0 74 aa16.36■□□□□ 0.21
HLA-C-202ENST00000376237 C18orf15Q96N68 181 aa16.36■□□□□ 0.21
HLA-C-202ENST00000376237 YPEL4Q96NS1 127 aa16.36■□□□□ 0.21
HLA-C-202ENST00000376237 AP1S3Q96PC3 154 aa16.36■□□□□ 0.21
HLA-C-202ENST00000376237 MSRB1Q9NZV6 116 aa16.36■□□□□ 0.21
HLA-C-202ENST00000376237 A0A0J9YWU9 116 aa16.35■□□□□ 0.21
HLA-C-202ENST00000376237 GAGE12BA1L429 117 aa16.35■□□□□ 0.21
HLA-C-202ENST00000376237 GAGE7O76087 117 aa16.35■□□□□ 0.21
HLA-C-202ENST00000376237 GAGE12FP0CL80 117 aa16.35■□□□□ 0.21
HLA-C-202ENST00000376237 GAGE12GP0CL81 117 aa16.35■□□□□ 0.21
HLA-C-202ENST00000376237 GAGE12IP0CL82 117 aa16.35■□□□□ 0.21
HLA-C-202ENST00000376237 COX19Q49B96 90 aa16.35■□□□□ 0.21
HLA-C-202ENST00000376237 MUC4Q99102 2169 aa16.35■□□□□ 0.21
HLA-C-202ENST00000376237 CAMPP49913 170 aa16.34■□□□□ 0.21
HLA-C-202ENST00000376237 TRGV2A0A075B6R0 118 aa16.33■□□□□ 0.2
HLA-C-202ENST00000376237 TGIF2-C20orf24A0A0A6YYL0 155 aa16.33■□□□□ 0.2
HLA-C-202ENST00000376237 DEFB130BP0DP73 79 aa16.33■□□□□ 0.2
HLA-C-202ENST00000376237 DEFB130AP0DP74 79 aa16.33■□□□□ 0.2
HLA-C-202ENST00000376237 TMEM191AQ9H0A3 160 aa16.33■□□□□ 0.2
HLA-C-202ENST00000376237 CIDEAO60543 219 aa16.32■□□□□ 0.2
HLA-C-202ENST00000376237 SMIM17P0DL12 118 aa16.32■□□□□ 0.2
HLA-C-202ENST00000376237 GATD1Q8NB37 220 aa16.32■□□□□ 0.2
HLA-C-202ENST00000376237 FAM210BQ96KR6 192 aa16.32■□□□□ 0.2
HLA-C-202ENST00000376237 TRAV4A0A0B4J268 109 aa16.31■□□□□ 0.2
HLA-C-202ENST00000376237 RS1O15537 224 aa16.31■□□□□ 0.2
HLA-C-202ENST00000376237 EVI2AP22794 236 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms