RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 OR11H2Q8NH07 326 aa12.64□□□□□ -0.39
PFDN6-201ENST00000374606 C16orf74Q96GX8 76 aa12.64□□□□□ -0.39
PFDN6-201ENST00000374606 X6R8D5 127 aa12.64□□□□□ -0.39
PFDN6-201ENST00000374606 SMIM9A6NGZ8 99 aa12.63□□□□□ -0.39
PFDN6-201ENST00000374606 CTRLP40313 264 aa12.63□□□□□ -0.39
PFDN6-201ENST00000374606 ZNF493Q6ZR52 646 aa12.63□□□□□ -0.39
PFDN6-201ENST00000374606 ZNF575Q86XF7 245 aa12.63□□□□□ -0.39
PFDN6-201ENST00000374606 SBSPONQ8IVN8 264 aa12.63□□□□□ -0.39
PFDN6-201ENST00000374606 RNASE8Q8TDE3 154 aaKnown RBP12.63□□□□□ -0.39
PFDN6-201ENST00000374606 SMCO4Q9NRQ5 59 aa12.63□□□□□ -0.39
PFDN6-201ENST00000374606 MDFICQ9P1T7 246 aa12.63□□□□□ -0.39
PFDN6-201ENST00000374606 OR5AL1P0C617 328 aa12.62□□□□□ -0.39
PFDN6-201ENST00000374606 ARMS2P0C7Q2 107 aa12.62□□□□□ -0.39
PFDN6-201ENST00000374606 RNASE3P12724 160 aaKnown RBP12.62□□□□□ -0.39
PFDN6-201ENST00000374606 AZU1P20160 251 aa12.62□□□□□ -0.39
PFDN6-201ENST00000374606 TMEM88Q6PEY1 159 aa12.62□□□□□ -0.39
PFDN6-201ENST00000374606 CBLN2Q8IUK8 224 aa12.62□□□□□ -0.39
PFDN6-201ENST00000374606 C11orf72Q8NBR9 251 aa12.62□□□□□ -0.39
PFDN6-201ENST00000374606 BORCS7Q96B45 105 aa12.62□□□□□ -0.39
PFDN6-201ENST00000374606 PGLYRP4Q96LB8 373 aa12.62□□□□□ -0.39
PFDN6-201ENST00000374606 RETNQ9HD89 108 aa12.62□□□□□ -0.39
PFDN6-201ENST00000374606 URGCP-MRPS24S4R325 110 aa12.62□□□□□ -0.39
PFDN6-201ENST00000374606 F2Z2F3 143 aa12.61□□□□□ -0.39
PFDN6-201ENST00000374606 SNAI2O43623 268 aa12.61□□□□□ -0.39
PFDN6-201ENST00000374606 SCO1O75880 301 aa12.61□□□□□ -0.39
PFDN6-201ENST00000374606 FOXA3P55318 350 aaPredicted RBP12.61□□□□□ -0.39
PFDN6-201ENST00000374606 FAM3BP58499 235 aaPredicted RBP12.61□□□□□ -0.39
PFDN6-201ENST00000374606 LYZL1Q6UWQ5 148 aa12.61□□□□□ -0.39
PFDN6-201ENST00000374606 NUP35Q8NFH5 326 aa12.61□□□□□ -0.39
PFDN6-201ENST00000374606 C9orf85Q96MD7 179 aa12.61□□□□□ -0.39
PFDN6-201ENST00000374606 SPATA25Q9BR10 227 aa12.61□□□□□ -0.39
PFDN6-201ENST00000374606 OVOL2Q9BRP0 275 aa12.61□□□□□ -0.39
PFDN6-201ENST00000374606 GSN-AS1Q9NRJ2 163 aa12.61□□□□□ -0.39
PFDN6-201ENST00000374606 SNURFLB1AK76 121 aa12.6□□□□□ -0.39
PFDN6-201ENST00000374606 MIFP14174 115 aa12.6□□□□□ -0.39
PFDN6-201ENST00000374606 ZFAND6Q6FIF0 208 aa12.6□□□□□ -0.39
PFDN6-201ENST00000374606 SSBP4Q9BWG4 385 aaPredicted RBP12.6□□□□□ -0.39
PFDN6-201ENST00000374606 ZMAT4Q9H898 229 aa12.6□□□□□ -0.39
PFDN6-201ENST00000374606 PHLDA3Q9Y5J5 127 aa12.6□□□□□ -0.39
PFDN6-201ENST00000374606 CSMD3Q7Z407 3707 aa12.59□□□□□ -0.39
PFDN6-201ENST00000374606 TRAV9-1A0A075B6T8 112 aa12.59□□□□□ -0.39
PFDN6-201ENST00000374606 SCRT2Q9NQ03 307 aa12.59□□□□□ -0.39
PFDN6-201ENST00000374606 IGHV4-28A0A0C4DH34 117 aa12.58□□□□□ -0.4
PFDN6-201ENST00000374606 A0A1B0GUT8 65 aa12.58□□□□□ -0.4
PFDN6-201ENST00000374606 SPINK4O60575 86 aa12.58□□□□□ -0.4
PFDN6-201ENST00000374606 CACNG7P62955 275 aa12.58□□□□□ -0.4
PFDN6-201ENST00000374606 SPANXN1Q5VSR9 72 aa12.58□□□□□ -0.4
PFDN6-201ENST00000374606 ZFP82Q8N141 532 aa12.58□□□□□ -0.4
PFDN6-201ENST00000374606 OR10AG1Q8NH19 301 aa12.58□□□□□ -0.4
PFDN6-201ENST00000374606 IL17DQ8TAD2 202 aa12.58□□□□□ -0.4
PFDN6-201ENST00000374606 BTF3L4Q96K17 158 aa12.58□□□□□ -0.4
PFDN6-201ENST00000374606 TM2D3Q9BRN9 247 aa12.58□□□□□ -0.4
PFDN6-201ENST00000374606 SPXQ9BT56 116 aa12.58□□□□□ -0.4
PFDN6-201ENST00000374606 MUC21A0A0G2JKD1 596 aa12.57□□□□□ -0.4
PFDN6-201ENST00000374606 MUC21A0A140T8X8 626 aa12.57□□□□□ -0.4
PFDN6-201ENST00000374606 PLAC8L1A1L4L8 177 aa12.57□□□□□ -0.4
PFDN6-201ENST00000374606 M0R381 172 aa12.57□□□□□ -0.4
PFDN6-201ENST00000374606 ELOBQ15370 118 aa12.57□□□□□ -0.4
PFDN6-201ENST00000374606 MRPL54Q6P161 138 aaKnown RBP12.57□□□□□ -0.4
PFDN6-201ENST00000374606 Q8NAQ8 132 aa12.57□□□□□ -0.4
PFDN6-201ENST00000374606 SYT8Q8NBV8 401 aa12.57□□□□□ -0.4
PFDN6-201ENST00000374606 M0R2P5 195 aa12.56□□□□□ -0.4
PFDN6-201ENST00000374606 EMP1P54849 157 aa12.56□□□□□ -0.4
PFDN6-201ENST00000374606 SSTP61278 116 aa12.56□□□□□ -0.4
PFDN6-201ENST00000374606 RIGQ13278 110 aa12.56□□□□□ -0.4
PFDN6-201ENST00000374606 CNFNQ9BYD5 112 aa12.56□□□□□ -0.4
PFDN6-201ENST00000374606 HYDINQ4G0P3 5121 aa12.55□□□□□ -0.4
PFDN6-201ENST00000374606 NXPH4O95158 308 aa12.55□□□□□ -0.4
PFDN6-201ENST00000374606 DAZ2Q13117 558 aaKnown RBP12.55□□□□□ -0.4
PFDN6-201ENST00000374606 WDR73Q6P4I2 378 aa12.55□□□□□ -0.4
PFDN6-201ENST00000374606 ATP5L2Q7Z4Y8 100 aa12.55□□□□□ -0.4
PFDN6-201ENST00000374606 NOP10Q9NPE3 64 aaKnown RBP12.55□□□□□ -0.4
PFDN6-201ENST00000374606 TGIF2-C20orf24A0A0A6YYL0 155 aa12.54□□□□□ -0.4
PFDN6-201ENST00000374606 A0A1B0GW15 77 aa12.54□□□□□ -0.4
PFDN6-201ENST00000374606 NTF3P20783 257 aa12.54□□□□□ -0.4
PFDN6-201ENST00000374606 TWIST1Q15672 202 aa12.54□□□□□ -0.4
PFDN6-201ENST00000374606 ZNF876PQ49A33 203 aa12.54□□□□□ -0.4
PFDN6-201ENST00000374606 MRPL16Q9NX20 251 aaKnown RBP12.54□□□□□ -0.4
PFDN6-201ENST00000374606 TRBV24-1A0A075B6N3 115 aa12.53□□□□□ -0.4
PFDN6-201ENST00000374606 IGHV4-4A0A075B6R2 117 aa12.53□□□□□ -0.4
PFDN6-201ENST00000374606 DEFB4AO15263 64 aa12.53□□□□□ -0.4
PFDN6-201ENST00000374606 HBBP68871 147 aa12.53□□□□□ -0.4
PFDN6-201ENST00000374606 PTH2Q96A98 100 aa12.53□□□□□ -0.4
PFDN6-201ENST00000374606 YPEL4Q96NS1 127 aa12.53□□□□□ -0.4
PFDN6-201ENST00000374606 KRTAP17-1Q9BYP8 105 aa12.53□□□□□ -0.4
PFDN6-201ENST00000374606 MUC4Q99102 2169 aa12.52□□□□□ -0.4
PFDN6-201ENST00000374606 TRGV1A0A0A0MS02 117 aa12.52□□□□□ -0.41
PFDN6-201ENST00000374606 A0A1B0GXF2 115 aa12.52□□□□□ -0.41
PFDN6-201ENST00000374606 S100A8P05109 93 aa12.52□□□□□ -0.41
PFDN6-201ENST00000374606 LGALS9BQ3B8N2 356 aa12.52□□□□□ -0.41
PFDN6-201ENST00000374606 DMRTA1Q5VZB9 504 aa12.52□□□□□ -0.41
PFDN6-201ENST00000374606 AP1S3Q96PC3 154 aa12.52□□□□□ -0.41
PFDN6-201ENST00000374606 LYRM9A8MSI8 78 aa12.51□□□□□ -0.41
PFDN6-201ENST00000374606 TRGC1P0CF51 173 aa12.51□□□□□ -0.41
PFDN6-201ENST00000374606 CAMPP49913 170 aa12.51□□□□□ -0.41
PFDN6-201ENST00000374606 PIK3CD-AS1Q5SR53 167 aa12.51□□□□□ -0.41
PFDN6-201ENST00000374606 RASL11AQ6T310 242 aa12.51□□□□□ -0.41
PFDN6-201ENST00000374606 Q6ZTI0 123 aa12.51□□□□□ -0.41
PFDN6-201ENST00000374606 FAM210BQ96KR6 192 aa12.51□□□□□ -0.41
PFDN6-201ENST00000374606 NDUFAF3Q9BU61 184 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms