RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 NTF3P20783 257 aa13.09□□□□□ -0.31
CCDC7-203ENST00000362006 MDFICQ9P1T7 246 aa13.09□□□□□ -0.31
CCDC7-203ENST00000362006 TWIST1Q15672 202 aa13.09□□□□□ -0.31
CCDC7-203ENST00000362006 ZNF493Q6ZR52 646 aa13.09□□□□□ -0.31
CCDC7-203ENST00000362006 TIMM8BQ9Y5J9 83 aaPredicted RBP13.09□□□□□ -0.31
CCDC7-203ENST00000362006 HLA-DQA1P01909 254 aa13.08□□□□□ -0.32
CCDC7-203ENST00000362006 CAMPP49913 170 aa13.08□□□□□ -0.32
CCDC7-203ENST00000362006 ZFP82Q8N141 532 aa13.08□□□□□ -0.32
CCDC7-203ENST00000362006 OR10AG1Q8NH19 301 aa13.08□□□□□ -0.32
CCDC7-203ENST00000362006 SPXQ9BT56 116 aa13.08□□□□□ -0.32
CCDC7-203ENST00000362006 SMIM9A6NGZ8 99 aa13.07□□□□□ -0.32
CCDC7-203ENST00000362006 RAB4BP61018 213 aa13.07□□□□□ -0.32
CCDC7-203ENST00000362006 Q6ZWC4 215 aa13.07□□□□□ -0.32
CCDC7-203ENST00000362006 GATD1Q8NB37 220 aa13.07□□□□□ -0.32
CCDC7-203ENST00000362006 TMEM263Q8WUH6 116 aaKnown RBP13.07□□□□□ -0.32
CCDC7-203ENST00000362006 SNURFLB1AK76 121 aa13.07□□□□□ -0.32
CCDC7-203ENST00000362006 RRN3P1Q2M238 152 aa13.07□□□□□ -0.32
CCDC7-203ENST00000362006 TMEM136Q6ZRR5 245 aa13.07□□□□□ -0.32
CCDC7-203ENST00000362006 SYT8Q8NBV8 401 aa13.07□□□□□ -0.32
CCDC7-203ENST00000362006 TRAPPC1Q9Y5R8 145 aa13.07□□□□□ -0.32
CCDC7-203ENST00000362006 MUC21A0A0G2JKD1 596 aa13.06□□□□□ -0.32
CCDC7-203ENST00000362006 MUC21A0A140T8X8 626 aa13.06□□□□□ -0.32
CCDC7-203ENST00000362006 NXPH4O95158 308 aa13.06□□□□□ -0.32
CCDC7-203ENST00000362006 PTH2Q96A98 100 aa13.06□□□□□ -0.32
CCDC7-203ENST00000362006 C16orf74Q96GX8 76 aa13.06□□□□□ -0.32
CCDC7-203ENST00000362006 FRMD6-AS1P0C7T7 363 aa13.06□□□□□ -0.32
CCDC7-203ENST00000362006 SMIM15Q7Z3B0 74 aa13.06□□□□□ -0.32
CCDC7-203ENST00000362006 C11orf72Q8NBR9 251 aa13.06□□□□□ -0.32
CCDC7-203ENST00000362006 TRGC1P0CF51 173 aa13.05□□□□□ -0.32
CCDC7-203ENST00000362006 PIK3CD-AS1Q5SR53 167 aa13.05□□□□□ -0.32
CCDC7-203ENST00000362006 RNASE8Q8TDE3 154 aaKnown RBP13.05□□□□□ -0.32
CCDC7-203ENST00000362006 RCHY1Q96PM5 261 aa13.05□□□□□ -0.32
CCDC7-203ENST00000362006 M0R381 172 aa13.04□□□□□ -0.32
CCDC7-203ENST00000362006 AZU1P20160 251 aa13.04□□□□□ -0.32
CCDC7-203ENST00000362006 SSTP61278 116 aa13.04□□□□□ -0.32
CCDC7-203ENST00000362006 GSN-AS1Q9NRJ2 163 aa13.04□□□□□ -0.32
CCDC7-203ENST00000362006 M0R2P5 195 aa13.04□□□□□ -0.32
CCDC7-203ENST00000362006 TMEM191AQ9H0A3 160 aa13.04□□□□□ -0.32
CCDC7-203ENST00000362006 PRM2P04554 102 aa13.03□□□□□ -0.32
CCDC7-203ENST00000362006 DEFB135Q30KP9 77 aa13.03□□□□□ -0.32
CCDC7-203ENST00000362006 FRZBQ92765 325 aa13.03□□□□□ -0.32
CCDC7-203ENST00000362006 RNF183Q96D59 192 aa13.03□□□□□ -0.32
CCDC7-203ENST00000362006 NDUFAF3Q9BU61 184 aa13.03□□□□□ -0.32
CCDC7-203ENST00000362006 MRPL18Q9H0U6 180 aaKnown RBP13.03□□□□□ -0.32
CCDC7-203ENST00000362006 MSRB1Q9NZV6 116 aa13.03□□□□□ -0.32
CCDC7-203ENST00000362006 MUC4Q99102 2169 aa13.03□□□□□ -0.32
CCDC7-203ENST00000362006 C1orf196B1AJZ1 125 aa13.03□□□□□ -0.32
CCDC7-203ENST00000362006 TRGC2P03986 189 aa13.03□□□□□ -0.32
CCDC7-203ENST00000362006 DMRTA1Q5VZB9 504 aa13.03□□□□□ -0.32
CCDC7-203ENST00000362006 MGAM2Q2M2H8 2515 aa13.02□□□□□ -0.32
CCDC7-203ENST00000362006 APCSP02743 223 aa13.02□□□□□ -0.33
CCDC7-203ENST00000362006 FABP9Q0Z7S8 132 aa13.02□□□□□ -0.33
CCDC7-203ENST00000362006 TP53TG1Q9Y2A0 90 aa13.02□□□□□ -0.33
CCDC7-203ENST00000362006 ZNF876PQ49A33 203 aa13.01□□□□□ -0.33
CCDC7-203ENST00000362006 IL17DQ8TAD2 202 aa13.01□□□□□ -0.33
CCDC7-203ENST00000362006 AP1S3Q96PC3 154 aa13.01□□□□□ -0.33
CCDC7-203ENST00000362006 X6R8D5 127 aa13.01□□□□□ -0.33
CCDC7-203ENST00000362006 SPRY2O43597 315 aa13.01□□□□□ -0.33
CCDC7-203ENST00000362006 DAZ2Q13117 558 aaKnown RBP13.01□□□□□ -0.33
CCDC7-203ENST00000362006 K7EIL1 84 aa13□□□□□ -0.33
CCDC7-203ENST00000362006 OR11H2Q8NH07 326 aa13□□□□□ -0.33
CCDC7-203ENST00000362006 LGALS9BQ3B8N2 356 aa13□□□□□ -0.33
CCDC7-203ENST00000362006 FAM104BQ5XKR9 115 aa13□□□□□ -0.33
CCDC7-203ENST00000362006 NOTCH1P46531 2555 aa12.99□□□□□ -0.33
CCDC7-203ENST00000362006 MIFP14174 115 aa12.99□□□□□ -0.33
CCDC7-203ENST00000362006 RASL10AQ92737 203 aa12.99□□□□□ -0.33
CCDC7-203ENST00000362006 OVOL2Q9BRP0 275 aa12.99□□□□□ -0.33
CCDC7-203ENST00000362006 DNAH3Q8TD57 4116 aa12.99□□□□□ -0.33
CCDC7-203ENST00000362006 SMIM17P0DL12 118 aa12.98□□□□□ -0.33
CCDC7-203ENST00000362006 EVI2AP22794 236 aa12.98□□□□□ -0.33
CCDC7-203ENST00000362006 RAB5BP61020 215 aa12.98□□□□□ -0.33
CCDC7-203ENST00000362006 DPH3P1Q9H4G8 78 aa12.98□□□□□ -0.33
CCDC7-203ENST00000362006 PHOX2AO14813 284 aa12.98□□□□□ -0.33
CCDC7-203ENST00000362006 SLAQ13239 276 aa12.98□□□□□ -0.33
CCDC7-203ENST00000362006 PLAC8L1A1L4L8 177 aa12.97□□□□□ -0.33
CCDC7-203ENST00000362006 A8MWV9 139 aa12.97□□□□□ -0.33
CCDC7-203ENST00000362006 PRB2P02812 416 aaPredicted RBP12.97□□□□□ -0.33
CCDC7-203ENST00000362006 NBEAL1Q6ZS30 2694 aa12.97□□□□□ -0.33
CCDC7-203ENST00000362006 DEFB121Q5J5C9 76 aa12.97□□□□□ -0.33
CCDC7-203ENST00000362006 AMN1Q8IY45 258 aa12.96□□□□□ -0.33
CCDC7-203ENST00000362006 C14orf178Q8N769 122 aaPredicted RBP12.96□□□□□ -0.33
CCDC7-203ENST00000362006 NOP10Q9NPE3 64 aaKnown RBP12.96□□□□□ -0.33
CCDC7-203ENST00000362006 RAB4AP20338 218 aa12.95□□□□□ -0.34
CCDC7-203ENST00000362006 TRGV1A0A0A0MS02 117 aa12.94□□□□□ -0.34
CCDC7-203ENST00000362006 PPBPP02775 128 aa12.94□□□□□ -0.34
CCDC7-203ENST00000362006 RNF185Q96GF1 192 aa12.94□□□□□ -0.34
CCDC7-203ENST00000362006 MRPL16Q9NX20 251 aaKnown RBP12.94□□□□□ -0.34
CCDC7-203ENST00000362006 KIF25-AS1Q9Y6Z4 181 aa12.94□□□□□ -0.34
CCDC7-203ENST00000362006 KIAA1644Q3SXP7 199 aa12.94□□□□□ -0.34
CCDC7-203ENST00000362006 MRPL51Q4U2R6 128 aaKnown RBP12.94□□□□□ -0.34
CCDC7-203ENST00000362006 POM121L12Q8N7R1 296 aa12.93□□□□□ -0.34
CCDC7-203ENST00000362006 MRAP2Q96G30 205 aa12.93□□□□□ -0.34
CCDC7-203ENST00000362006 JPT2Q9H910 190 aa12.93□□□□□ -0.34
CCDC7-203ENST00000362006 IGHV4-28A0A0C4DH34 117 aa12.92□□□□□ -0.34
CCDC7-203ENST00000362006 LYRM9A8MSI8 78 aa12.92□□□□□ -0.34
CCDC7-203ENST00000362006 RHODO00212 210 aa12.92□□□□□ -0.34
CCDC7-203ENST00000362006 RS1O15537 224 aa12.92□□□□□ -0.34
CCDC7-203ENST00000362006 CRYGDP07320 174 aa12.92□□□□□ -0.34
CCDC7-203ENST00000362006 Q8NAQ8 132 aa12.92□□□□□ -0.34
CCDC7-203ENST00000362006 CIDEAO60543 219 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms