RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 NDUFB1O75438 58 aa10.06□□□□□ -0.8
NLRC3-202ENST00000359128 ZNF124Q15973 351 aa10.06□□□□□ -0.8
NLRC3-202ENST00000359128 COX7B2Q8TF08 81 aa10.06□□□□□ -0.8
NLRC3-202ENST00000359128 GPHB5Q86YW7 130 aa10.06□□□□□ -0.8
NLRC3-202ENST00000359128 FAM186AA6NE01 2351 aa10.06□□□□□ -0.8
NLRC3-202ENST00000359128 NCR3O14931 201 aa10.06□□□□□ -0.8
NLRC3-202ENST00000359128 DEFB125Q8N687 156 aa10.06□□□□□ -0.8
NLRC3-202ENST00000359128 HILS1P60008 231 aa10.05□□□□□ -0.8
NLRC3-202ENST00000359128 PRR20EP86478 221 aa10.05□□□□□ -0.8
NLRC3-202ENST00000359128 PRR20CP86479 221 aa10.05□□□□□ -0.8
NLRC3-202ENST00000359128 PRR20DP86480 221 aa10.05□□□□□ -0.8
NLRC3-202ENST00000359128 PRR20BP86481 221 aa10.05□□□□□ -0.8
NLRC3-202ENST00000359128 PRR20AP86496 221 aa10.05□□□□□ -0.8
NLRC3-202ENST00000359128 K7EIM0 57 aa10.05□□□□□ -0.8
NLRC3-202ENST00000359128 IGHV4-31P0DP07 118 aa10.05□□□□□ -0.8
NLRC3-202ENST00000359128 HIST2H2BCQ6DN03 193 aa10.05□□□□□ -0.8
NLRC3-202ENST00000359128 CHKB-CPT1BH3BT56 60 aa10.05□□□□□ -0.8
NLRC3-202ENST00000359128 SIRPDQ9H106 197 aa10.05□□□□□ -0.8
NLRC3-202ENST00000359128 RPL39LQ96EH5 51 aaKnown RBP10.04□□□□□ -0.8
NLRC3-202ENST00000359128 C11orf52Q96A22 123 aa10.04□□□□□ -0.8
NLRC3-202ENST00000359128 CACNA1GO43497 2377 aa10.04□□□□□ -0.8
NLRC3-202ENST00000359128 TRBV7-3A0A075B6L6 115 aa10.04□□□□□ -0.8
NLRC3-202ENST00000359128 IGHV4-28A0A0C4DH34 117 aa10.04□□□□□ -0.8
NLRC3-202ENST00000359128 A6NDX4 124 aa10.04□□□□□ -0.8
NLRC3-202ENST00000359128 WIPF3A6NGB9 483 aa10.04□□□□□ -0.8
NLRC3-202ENST00000359128 CTSGP08311 255 aa10.04□□□□□ -0.8
NLRC3-202ENST00000359128 Q8N7P7 452 aa10.04□□□□□ -0.8
NLRC3-202ENST00000359128 RIF1Q5UIP0 2472 aaKnown RBP10.04□□□□□ -0.8
NLRC3-202ENST00000359128 TRACP01848 142 aa10.04□□□□□ -0.8
NLRC3-202ENST00000359128 KIAA2026Q5HYC2 2103 aa10.04□□□□□ -0.8
NLRC3-202ENST00000359128 SEM1Q6ZVN7 128 aa10.04□□□□□ -0.8
NLRC3-202ENST00000359128 ZNF843Q8N446 348 aa10.04□□□□□ -0.8
NLRC3-202ENST00000359128 IGHG2P01859 326 aa10.04□□□□□ -0.8
NLRC3-202ENST00000359128 KRTAP27-1Q3LI81 207 aa10.04□□□□□ -0.8
NLRC3-202ENST00000359128 Q8N1Y9 231 aa10.04□□□□□ -0.8
NLRC3-202ENST00000359128 ADAMTS9Q9P2N4 1935 aa10.03□□□□□ -0.8
NLRC3-202ENST00000359128 PRSS47A8MTI9 375 aa10.03□□□□□ -0.8
NLRC3-202ENST00000359128 Q8NA96 180 aa10.03□□□□□ -0.8
NLRC3-202ENST00000359128 B9D2Q9BPU9 175 aa10.03□□□□□ -0.8
NLRC3-202ENST00000359128 FBXL19-AS1Q494R0 122 aa10.03□□□□□ -0.8
NLRC3-202ENST00000359128 SHISA2Q6UWI4 295 aa10.03□□□□□ -0.8
NLRC3-202ENST00000359128 A0A1W2PNU3 283 aaPredicted RBP10.03□□□□□ -0.8
NLRC3-202ENST00000359128 MRPL52Q86TS9 123 aaKnown RBP10.03□□□□□ -0.8
NLRC3-202ENST00000359128 KLK12Q9UKR0 248 aa10.03□□□□□ -0.8
NLRC3-202ENST00000359128 DOCK8Q8NF50 2099 aa10.02□□□□□ -0.8
NLRC3-202ENST00000359128 VSIG2Q96IQ7 327 aa10.02□□□□□ -0.81
NLRC3-202ENST00000359128 C19orf84I3L1E1 186 aa10.02□□□□□ -0.81
NLRC3-202ENST00000359128 TMEM263Q8WUH6 116 aaKnown RBP10.02□□□□□ -0.81
NLRC3-202ENST00000359128 COX8AP10176 69 aa10.01□□□□□ -0.81
NLRC3-202ENST00000359128 DKK2Q9UBU2 259 aa10.01□□□□□ -0.81
NLRC3-202ENST00000359128 WI2-2373I1.2A0A1W2PRP0 233 aa10.01□□□□□ -0.81
NLRC3-202ENST00000359128 ADCYAP1P18509 176 aa10.01□□□□□ -0.81
NLRC3-202ENST00000359128 C20orf144Q9BQM9 153 aa10.01□□□□□ -0.81
NLRC3-202ENST00000359128 GTSF1LQ9H1H1 148 aa10.01□□□□□ -0.81
NLRC3-202ENST00000359128 C9orf118A6NHY6 69 aa10.01□□□□□ -0.81
NLRC3-202ENST00000359128 TMEM131Q92545 1883 aa10.01□□□□□ -0.81
NLRC3-202ENST00000359128 SPATA25Q9BR10 227 aa10.01□□□□□ -0.81
NLRC3-202ENST00000359128 FGF23Q9GZV9 251 aaPredicted RBP10.01□□□□□ -0.81
NLRC3-202ENST00000359128 POLR3KQ9Y2Y1 108 aaPredicted RBP10.01□□□□□ -0.81
NLRC3-202ENST00000359128 K7EN84 100 aa10□□□□□ -0.81
NLRC3-202ENST00000359128 UBE2V1Q13404 147 aa10□□□□□ -0.81
NLRC3-202ENST00000359128 ALPK2Q86TB3 2170 aa10□□□□□ -0.81
NLRC3-202ENST00000359128 COL6A6A6NMZ7 2263 aa10□□□□□ -0.81
NLRC3-202ENST00000359128 MED12Q93074 2177 aa10□□□□□ -0.81
NLRC3-202ENST00000359128 GTSF1Q8WW33 167 aa10□□□□□ -0.81
NLRC3-202ENST00000359128 Q6YL49 198 aa10□□□□□ -0.81
NLRC3-202ENST00000359128 WFDC11Q8NEX6 87 aa10□□□□□ -0.81
NLRC3-202ENST00000359128 CACNA1DQ01668 2161 aa10□□□□□ -0.81
NLRC3-202ENST00000359128 H3BQ85 93 aa10□□□□□ -0.81
NLRC3-202ENST00000359128 MAP6D1Q9H9H5 199 aa10□□□□□ -0.81
NLRC3-202ENST00000359128 TNFRSF13BO14836 293 aaPredicted RBP9.99□□□□□ -0.81
NLRC3-202ENST00000359128 BAALC-AS2P0C853 105 aa9.99□□□□□ -0.81
NLRC3-202ENST00000359128 ZNF664Q8N3J9 261 aa9.99□□□□□ -0.81
NLRC3-202ENST00000359128 PPDPFLQ8WWR9 84 aa9.99□□□□□ -0.81
NLRC3-202ENST00000359128 SND1-IT1Q9HBX3 110 aa9.99□□□□□ -0.81
NLRC3-202ENST00000359128 GATA1P15976 413 aaPredicted RBP9.99□□□□□ -0.81
NLRC3-202ENST00000359128 CXCL5P42830 114 aa9.99□□□□□ -0.81
NLRC3-202ENST00000359128 SPAG11BQ08648 103 aa9.99□□□□□ -0.81
NLRC3-202ENST00000359128 PROP1O75360 226 aa9.99□□□□□ -0.81
NLRC3-202ENST00000359128 ZFP2Q6ZN57 461 aa9.99□□□□□ -0.81
NLRC3-202ENST00000359128 COX11Q9Y6N1 276 aa9.99□□□□□ -0.81
NLRC3-202ENST00000359128 PRO0255Q9UI72 69 aa9.98□□□□□ -0.81
NLRC3-202ENST00000359128 IGLL1P15814 213 aa9.98□□□□□ -0.81
NLRC3-202ENST00000359128 TEX22C9J3V5 150 aa9.97□□□□□ -0.81
NLRC3-202ENST00000359128 C9JQL5 133 aa9.97□□□□□ -0.81
NLRC3-202ENST00000359128 LY6G6DO95868 133 aa9.97□□□□□ -0.81
NLRC3-202ENST00000359128 DOCK7Q96N67 2140 aa9.97□□□□□ -0.81
NLRC3-202ENST00000359128 TRBV12-3P01733 135 aa9.97□□□□□ -0.81
NLRC3-202ENST00000359128 LRCOL1A6NCL2 159 aa9.97□□□□□ -0.81
NLRC3-202ENST00000359128 F8W1H4 67 aa9.97□□□□□ -0.81
NLRC3-202ENST00000359128 DLEU1O43261 78 aa9.97□□□□□ -0.81
NLRC3-202ENST00000359128 GAGE12HA6NDE8 117 aa9.96□□□□□ -0.81
NLRC3-202ENST00000359128 IGLC2P0DOY2 106 aa9.96□□□□□ -0.81
NLRC3-202ENST00000359128 IGLC3P0DOY3 106 aa9.96□□□□□ -0.81
NLRC3-202ENST00000359128 K7ERJ3 54 aa9.96□□□□□ -0.81
NLRC3-202ENST00000359128 SPANXDQ9BXN6 97 aa9.96□□□□□ -0.81
NLRC3-202ENST00000359128 SPRY4Q9C004 299 aa9.96□□□□□ -0.81
NLRC3-202ENST00000359128 PYY3Q5JQD4 70 aa9.96□□□□□ -0.82
NLRC3-202ENST00000359128 OPRPNQ99935 248 aaPredicted RBP9.96□□□□□ -0.82
NLRC3-202ENST00000359128 NCOR1O75376 2440 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms