RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 SAA4P35542 130 aa9.09□□□□□ -0.95
CCDC144CP-201ENST00000340196 GAGE13Q4V321 117 aa9.09□□□□□ -0.95
CCDC144CP-201ENST00000340196 UNQ9165/PRO28630Q6UXU0 137 aa9.09□□□□□ -0.95
CCDC144CP-201ENST00000340196 ITLN2Q8WWU7 325 aaPredicted RBP9.09□□□□□ -0.95
CCDC144CP-201ENST00000340196 AJUBAQ96IF1 538 aa9.09□□□□□ -0.95
CCDC144CP-201ENST00000340196 HIGD1BQ9P298 99 aa9.09□□□□□ -0.95
CCDC144CP-201ENST00000340196 A0A087WX48 190 aa9.09□□□□□ -0.95
CCDC144CP-201ENST00000340196 A0A1B0GWB2 263 aa9.09□□□□□ -0.95
CCDC144CP-201ENST00000340196 RPL32P62910 135 aaKnown RBP9.09□□□□□ -0.95
CCDC144CP-201ENST00000340196 KLHL30-AS1Q8NEE0 82 aa9.09□□□□□ -0.95
CCDC144CP-201ENST00000340196 PRO0461Q9UI25 63 aa9.09□□□□□ -0.95
CCDC144CP-201ENST00000340196 M0R1W7 72 aa9.09□□□□□ -0.96
CCDC144CP-201ENST00000340196 TGFAP01135 160 aa9.09□□□□□ -0.96
CCDC144CP-201ENST00000340196 SRD5A1P18405 259 aa9.09□□□□□ -0.96
CCDC144CP-201ENST00000340196 EDN2P20800 178 aa9.09□□□□□ -0.96
CCDC144CP-201ENST00000340196 GNLYP22749 145 aa9.09□□□□□ -0.96
CCDC144CP-201ENST00000340196 Q6ZUT4 128 aa9.09□□□□□ -0.96
CCDC144CP-201ENST00000340196 PLEKHB2Q96CS7 222 aa9.09□□□□□ -0.96
CCDC144CP-201ENST00000340196 C16orf92Q96LL3 132 aa9.09□□□□□ -0.96
CCDC144CP-201ENST00000340196 C1QTNF4Q9BXJ3 329 aa9.09□□□□□ -0.96
CCDC144CP-201ENST00000340196 ATP5LO75964 103 aa9.08□□□□□ -0.96
CCDC144CP-201ENST00000340196 GNRH2O43555 120 aa9.08□□□□□ -0.96
CCDC144CP-201ENST00000340196 APOMO95445 188 aa9.08□□□□□ -0.96
CCDC144CP-201ENST00000340196 IGHV3-11P01762 117 aa9.08□□□□□ -0.96
CCDC144CP-201ENST00000340196 FOXI1Q12951 378 aa9.08□□□□□ -0.96
CCDC144CP-201ENST00000340196 FAM110DQ8TAY7 271 aaPredicted RBP9.08□□□□□ -0.96
CCDC144CP-201ENST00000340196 RASL10AQ92737 203 aa9.08□□□□□ -0.96
CCDC144CP-201ENST00000340196 JPT2Q9H910 190 aa9.08□□□□□ -0.96
CCDC144CP-201ENST00000340196 PIFOQ8TCI5 191 aa9.07□□□□□ -0.96
CCDC144CP-201ENST00000340196 SMIM2Q9BVW6 85 aa9.07□□□□□ -0.96
CCDC144CP-201ENST00000340196 IGSF10Q6WRI0 2623 aa9.07□□□□□ -0.96
CCDC144CP-201ENST00000340196 HLA-DRB4P13762 266 aa9.07□□□□□ -0.96
CCDC144CP-201ENST00000340196 RPL11P62913 178 aaKnown RBP9.07□□□□□ -0.96
CCDC144CP-201ENST00000340196 SCGB3A1Q96QR1 104 aa9.07□□□□□ -0.96
CCDC144CP-201ENST00000340196 HLA-DRB4X5D2U9 266 aa9.07□□□□□ -0.96
CCDC144CP-201ENST00000340196 SORL1Q92673 2214 aa9.06□□□□□ -0.96
CCDC144CP-201ENST00000340196 ABCA2Q9BZC7 2435 aa9.06□□□□□ -0.96
CCDC144CP-201ENST00000340196 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.06□□□□□ -0.96
CCDC144CP-201ENST00000340196 METTL26Q96S19 204 aa9.06□□□□□ -0.96
CCDC144CP-201ENST00000340196 SIRPDQ9H106 197 aa9.06□□□□□ -0.96
CCDC144CP-201ENST00000340196 TNFRSF18Q9Y5U5 241 aa9.06□□□□□ -0.96
CCDC144CP-201ENST00000340196 UTP20O75691 2785 aaKnown RBP9.06□□□□□ -0.96
CCDC144CP-201ENST00000340196 CFAP46Q8IYW2 2715 aa9.06□□□□□ -0.96
CCDC144CP-201ENST00000340196 TRBV7-3A0A075B6L6 115 aa9.06□□□□□ -0.96
CCDC144CP-201ENST00000340196 NHLRC4P0CG21 123 aaPredicted RBP9.06□□□□□ -0.96
CCDC144CP-201ENST00000340196 SRSF1Q07955 248 aaKnown RBP eCLIP9.06□□□□□ -0.96
CCDC144CP-201ENST00000340196 C11orf71Q6IPW1 123 aa9.06□□□□□ -0.96
CCDC144CP-201ENST00000340196 BRD3OSQ6XYD6 125 aa9.06□□□□□ -0.96
CCDC144CP-201ENST00000340196 NFE4Q86UQ8 179 aa9.06□□□□□ -0.96
CCDC144CP-201ENST00000340196 GPHB5Q86YW7 130 aa9.06□□□□□ -0.96
CCDC144CP-201ENST00000340196 LGALS1P09382 135 aaKnown RBP9.05□□□□□ -0.96
CCDC144CP-201ENST00000340196 S100A4P26447 101 aaKnown RBP9.05□□□□□ -0.96
CCDC144CP-201ENST00000340196 EBI3Q14213 229 aa9.05□□□□□ -0.96
CCDC144CP-201ENST00000340196 MORN3Q6PF18 240 aaPredicted RBP9.05□□□□□ -0.96
CCDC144CP-201ENST00000340196 SLC50A1Q9BRV3 221 aa9.05□□□□□ -0.96
CCDC144CP-201ENST00000340196 F8VRH5 84 aa9.05□□□□□ -0.96
CCDC144CP-201ENST00000340196 RNASE4P34096 147 aaKnown RBP9.05□□□□□ -0.96
CCDC144CP-201ENST00000340196 SRSF2Q01130 221 aaKnown RBP9.05□□□□□ -0.96
CCDC144CP-201ENST00000340196 PTH2Q96A98 100 aa9.05□□□□□ -0.96
CCDC144CP-201ENST00000340196 PRADC1Q9BSG0 188 aa9.05□□□□□ -0.96
CCDC144CP-201ENST00000340196 USP24Q9UPU5 2620 aa9.05□□□□□ -0.96
CCDC144CP-201ENST00000340196 MUC4Q99102 2169 aa9.05□□□□□ -0.96
CCDC144CP-201ENST00000340196 DUSP14O95147 198 aaKnown RBP9.04□□□□□ -0.96
CCDC144CP-201ENST00000340196 ARL3P36405 182 aa9.04□□□□□ -0.96
CCDC144CP-201ENST00000340196 SUMO2P61956 95 aaKnown RBP9.04□□□□□ -0.96
CCDC144CP-201ENST00000340196 C2orf66Q6UXQ4 117 aa9.04□□□□□ -0.96
CCDC144CP-201ENST00000340196 BAALCQ8WXS3 180 aa9.04□□□□□ -0.96
CCDC144CP-201ENST00000340196 UBTD1Q9HAC8 227 aa9.04□□□□□ -0.96
CCDC144CP-201ENST00000340196 SLC25A16P16260 332 aa9.04□□□□□ -0.96
CCDC144CP-201ENST00000340196 ID1P41134 155 aa9.04□□□□□ -0.96
CCDC144CP-201ENST00000340196 ZFP2Q6ZN57 461 aa9.04□□□□□ -0.96
CCDC144CP-201ENST00000340196 ZFAND2AQ8N6M9 145 aa9.04□□□□□ -0.96
CCDC144CP-201ENST00000340196 CSPG4Q6UVK1 2322 aa9.04□□□□□ -0.96
CCDC144CP-201ENST00000340196 CREBBPQ92793 2442 aa9.04□□□□□ -0.96
CCDC144CP-201ENST00000340196 MYMXA0A1B0GTQ4 84 aa9.04□□□□□ -0.96
CCDC144CP-201ENST00000340196 RBAKDNA6NC62 111 aa9.04□□□□□ -0.96
CCDC144CP-201ENST00000340196 H7C1H1 209 aa9.04□□□□□ -0.96
CCDC144CP-201ENST00000340196 SCGB2A1O75556 95 aa9.04□□□□□ -0.96
CCDC144CP-201ENST00000340196 RPL39P62891 51 aaKnown RBP9.04□□□□□ -0.96
CCDC144CP-201ENST00000340196 RRN3P1Q2M238 152 aa9.04□□□□□ -0.96
CCDC144CP-201ENST00000340196 BPESC1Q9GZL8 116 aa9.04□□□□□ -0.96
CCDC144CP-201ENST00000340196 DOPEY2Q9Y3R5 2298 aa9.03□□□□□ -0.96
CCDC144CP-201ENST00000340196 C9orf47Q6ZRZ4 202 aa9.03□□□□□ -0.96
CCDC144CP-201ENST00000340196 NEXN-AS1Q8NBZ9 246 aa9.03□□□□□ -0.96
CCDC144CP-201ENST00000340196 ZANQ9Y493 2812 aa9.03□□□□□ -0.96
CCDC144CP-201ENST00000340196 LINC01549A6NIU2 74 aa9.03□□□□□ -0.96
CCDC144CP-201ENST00000340196 ZNF815PA8K554 130 aa9.03□□□□□ -0.96
CCDC144CP-201ENST00000340196 PLNP26678 52 aa9.03□□□□□ -0.96
CCDC144CP-201ENST00000340196 SMCPP49901 116 aaPredicted RBP9.03□□□□□ -0.96
CCDC144CP-201ENST00000340196 LY6EQ16553 131 aa9.03□□□□□ -0.96
CCDC144CP-201ENST00000340196 SCGB1D4Q6XE38 83 aa9.03□□□□□ -0.96
CCDC144CP-201ENST00000340196 PHLDA3Q9Y5J5 127 aa9.03□□□□□ -0.96
CCDC144CP-201ENST00000340196 A0A087WWL8 130 aa9.02□□□□□ -0.97
CCDC144CP-201ENST00000340196 LOC107984156A0A0G2JMH3 177 aa9.02□□□□□ -0.97
CCDC144CP-201ENST00000340196 ARL17AQ8IVW1 177 aa9.02□□□□□ -0.97
CCDC144CP-201ENST00000340196 EEF1AKMT3Q96AZ1 226 aa9.02□□□□□ -0.97
CCDC144CP-201ENST00000340196 CENPVL3A0A0U1RRI6 287 aa9.02□□□□□ -0.97
CCDC144CP-201ENST00000340196 CCDC179H3BU77 68 aa9.02□□□□□ -0.97
CCDC144CP-201ENST00000340196 Q6ZS46 218 aa9.02□□□□□ -0.97
CCDC144CP-201ENST00000340196 TMEM190Q8WZ59 177 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms