RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 H3BVH4 76 aa12.81□□□□□ -0.36
SDCBP2-201ENST00000339987 SNAI2O43623 268 aa12.81□□□□□ -0.36
SDCBP2-201ENST00000339987 OR5AL1P0C617 328 aa12.81□□□□□ -0.36
SDCBP2-201ENST00000339987 ARMS2P0C7Q2 107 aa12.81□□□□□ -0.36
SDCBP2-201ENST00000339987 SSBP4Q9BWG4 385 aaPredicted RBP12.81□□□□□ -0.36
SDCBP2-201ENST00000339987 PRKDCP78527 4128 aaKnown RBP12.81□□□□□ -0.36
SDCBP2-201ENST00000339987 DEFB4AO15263 64 aa12.8□□□□□ -0.36
SDCBP2-201ENST00000339987 S100PP25815 95 aa12.8□□□□□ -0.36
SDCBP2-201ENST00000339987 EMP1P54849 157 aa12.8□□□□□ -0.36
SDCBP2-201ENST00000339987 FER1L6-AS1Q8NA97 138 aa12.8□□□□□ -0.36
SDCBP2-201ENST00000339987 GTSF1Q8WW33 167 aa12.8□□□□□ -0.36
SDCBP2-201ENST00000339987 PTH2Q96A98 100 aa12.8□□□□□ -0.36
SDCBP2-201ENST00000339987 DNAH9Q9NYC9 4486 aa12.8□□□□□ -0.36
SDCBP2-201ENST00000339987 LYRM9A8MSI8 78 aa12.79□□□□□ -0.36
SDCBP2-201ENST00000339987 FOXA3P55318 350 aaPredicted RBP12.79□□□□□ -0.36
SDCBP2-201ENST00000339987 NOP10Q9NPE3 64 aaKnown RBP12.79□□□□□ -0.36
SDCBP2-201ENST00000339987 A0A0J9YWU9 116 aa12.79□□□□□ -0.36
SDCBP2-201ENST00000339987 TEX48A0A1B0GUV7 120 aa12.79□□□□□ -0.36
SDCBP2-201ENST00000339987 SMIM27A0A1W2PRY6 76 aa12.79□□□□□ -0.36
SDCBP2-201ENST00000339987 F2Z2F3 143 aa12.79□□□□□ -0.36
SDCBP2-201ENST00000339987 M0R2P5 195 aa12.79□□□□□ -0.36
SDCBP2-201ENST00000339987 SPINK4O60575 86 aa12.79□□□□□ -0.36
SDCBP2-201ENST00000339987 CTRLP40313 264 aa12.79□□□□□ -0.36
SDCBP2-201ENST00000339987 LGALS9BQ3B8N2 356 aa12.79□□□□□ -0.36
SDCBP2-201ENST00000339987 DKK2Q9UBU2 259 aa12.79□□□□□ -0.36
SDCBP2-201ENST00000339987 U3KQK5 164 aa12.79□□□□□ -0.36
SDCBP2-201ENST00000339987 TENM3Q9P273 2699 aa12.78□□□□□ -0.36
SDCBP2-201ENST00000339987 FAM222AQ5U5X8 452 aa12.78□□□□□ -0.36
SDCBP2-201ENST00000339987 KCNIP4Q6PIL6 250 aa12.78□□□□□ -0.36
SDCBP2-201ENST00000339987 PHLDA3Q9Y5J5 127 aa12.78□□□□□ -0.36
SDCBP2-201ENST00000339987 SPART-AS1P0CW21 52 aa12.77□□□□□ -0.37
SDCBP2-201ENST00000339987 PIK3CD-AS1Q5SR53 167 aa12.77□□□□□ -0.37
SDCBP2-201ENST00000339987 WDR73Q6P4I2 378 aa12.77□□□□□ -0.37
SDCBP2-201ENST00000339987 LYZL1Q6UWQ5 148 aa12.77□□□□□ -0.37
SDCBP2-201ENST00000339987 LINC00612Q8N6U2 182 aa12.77□□□□□ -0.37
SDCBP2-201ENST00000339987 RASL10AQ92737 203 aa12.77□□□□□ -0.37
SDCBP2-201ENST00000339987 NDUFAF3Q9BU61 184 aa12.77□□□□□ -0.37
SDCBP2-201ENST00000339987 HUWE1Q7Z6Z7 4374 aaKnown RBP12.76□□□□□ -0.37
SDCBP2-201ENST00000339987 HIGD1CA8MV81 97 aa12.76□□□□□ -0.37
SDCBP2-201ENST00000339987 NXPH4O95158 308 aa12.76□□□□□ -0.37
SDCBP2-201ENST00000339987 ZFP82Q8N141 532 aa12.76□□□□□ -0.37
SDCBP2-201ENST00000339987 OR10AG1Q8NH19 301 aa12.76□□□□□ -0.37
SDCBP2-201ENST00000339987 BTF3L4Q96K17 158 aa12.76□□□□□ -0.37
SDCBP2-201ENST00000339987 IMMP2LQ96T52 175 aa12.76□□□□□ -0.37
SDCBP2-201ENST00000339987 TPPP3Q9BW30 176 aa12.76□□□□□ -0.37
SDCBP2-201ENST00000339987 CNFNQ9BYD5 112 aa12.76□□□□□ -0.37
SDCBP2-201ENST00000339987 NAT8BQ9UHF3 227 aa12.76□□□□□ -0.37
SDCBP2-201ENST00000339987 CELA1Q9UNI1 258 aa12.76□□□□□ -0.37
SDCBP2-201ENST00000339987 MUC4Q99102 2169 aa12.75□□□□□ -0.37
SDCBP2-201ENST00000339987 TRGV1A0A0A0MS02 117 aa12.75□□□□□ -0.37
SDCBP2-201ENST00000339987 CACNG7P62955 275 aa12.75□□□□□ -0.37
SDCBP2-201ENST00000339987 Q6ZTI0 123 aa12.75□□□□□ -0.37
SDCBP2-201ENST00000339987 SYT8Q8NBV8 401 aa12.75□□□□□ -0.37
SDCBP2-201ENST00000339987 MRPL16Q9NX20 251 aaKnown RBP12.75□□□□□ -0.37
SDCBP2-201ENST00000339987 IGHV4-4A0A075B6R2 117 aa12.74□□□□□ -0.37
SDCBP2-201ENST00000339987 ZNF876PQ49A33 203 aa12.74□□□□□ -0.37
SDCBP2-201ENST00000339987 NUP35Q8NFH5 326 aa12.74□□□□□ -0.37
SDCBP2-201ENST00000339987 PGLYRP4Q96LB8 373 aa12.74□□□□□ -0.37
SDCBP2-201ENST00000339987 SPANXN1Q5VSR9 72 aa12.73□□□□□ -0.37
SDCBP2-201ENST00000339987 C18orf15Q96N68 181 aa12.73□□□□□ -0.37
SDCBP2-201ENST00000339987 EDA2RQ9HAV5 297 aa12.73□□□□□ -0.37
SDCBP2-201ENST00000339987 GAGE12BA1L429 117 aa12.72□□□□□ -0.37
SDCBP2-201ENST00000339987 M0R381 172 aa12.72□□□□□ -0.37
SDCBP2-201ENST00000339987 GAGE7O76087 117 aa12.72□□□□□ -0.37
SDCBP2-201ENST00000339987 GAGE12FP0CL80 117 aa12.72□□□□□ -0.37
SDCBP2-201ENST00000339987 GAGE12GP0CL81 117 aa12.72□□□□□ -0.37
SDCBP2-201ENST00000339987 GAGE12IP0CL82 117 aa12.72□□□□□ -0.37
SDCBP2-201ENST00000339987 DMRTA1Q5VZB9 504 aa12.72□□□□□ -0.37
SDCBP2-201ENST00000339987 BORCS7Q96B45 105 aa12.72□□□□□ -0.37
SDCBP2-201ENST00000339987 URGCP-MRPS24S4R325 110 aa12.72□□□□□ -0.37
SDCBP2-201ENST00000339987 MUC21A0A0G2JKD1 596 aa12.71□□□□□ -0.37
SDCBP2-201ENST00000339987 MUC21A0A140T8X8 626 aa12.71□□□□□ -0.37
SDCBP2-201ENST00000339987 A0A1B0GUT8 65 aa12.71□□□□□ -0.37
SDCBP2-201ENST00000339987 COLCA2A8K830 154 aa12.71□□□□□ -0.37
SDCBP2-201ENST00000339987 DAD1P61803 113 aa12.71□□□□□ -0.37
SDCBP2-201ENST00000339987 DEFB130BP0DP73 79 aa12.71□□□□□ -0.38
SDCBP2-201ENST00000339987 DEFB130AP0DP74 79 aa12.71□□□□□ -0.38
SDCBP2-201ENST00000339987 ELOBQ15370 118 aa12.71□□□□□ -0.38
SDCBP2-201ENST00000339987 C11orf45Q8TAV5 145 aa12.71□□□□□ -0.38
SDCBP2-201ENST00000339987 TRGV2A0A075B6R0 118 aa12.7□□□□□ -0.38
SDCBP2-201ENST00000339987 TRAV9-1A0A075B6T8 112 aa12.7□□□□□ -0.38
SDCBP2-201ENST00000339987 A8MWV9 139 aa12.7□□□□□ -0.38
SDCBP2-201ENST00000339987 NTF3P20783 257 aa12.7□□□□□ -0.38
SDCBP2-201ENST00000339987 FAM3BP58499 235 aaPredicted RBP12.7□□□□□ -0.38
SDCBP2-201ENST00000339987 C12orf74Q32Q52 190 aa12.7□□□□□ -0.38
SDCBP2-201ENST00000339987 TMA7Q9Y2S6 64 aaKnown RBP12.7□□□□□ -0.38
SDCBP2-201ENST00000339987 TRAV4A0A0B4J268 109 aa12.69□□□□□ -0.38
SDCBP2-201ENST00000339987 RS1O15537 224 aa12.69□□□□□ -0.38
SDCBP2-201ENST00000339987 RAB5AP20339 215 aa12.69□□□□□ -0.38
SDCBP2-201ENST00000339987 RIGQ13278 110 aa12.69□□□□□ -0.38
SDCBP2-201ENST00000339987 COL7A1Q02388 2944 aa12.69□□□□□ -0.38
SDCBP2-201ENST00000339987 TRBV24-1A0A075B6N3 115 aa12.68□□□□□ -0.38
SDCBP2-201ENST00000339987 A0A1B0GW15 77 aa12.68□□□□□ -0.38
SDCBP2-201ENST00000339987 TRGC1P0CF51 173 aa12.68□□□□□ -0.38
SDCBP2-201ENST00000339987 SSTP61278 116 aa12.68□□□□□ -0.38
SDCBP2-201ENST00000339987 TWIST1Q15672 202 aa12.68□□□□□ -0.38
SDCBP2-201ENST00000339987 FAM210BQ96KR6 192 aa12.68□□□□□ -0.38
SDCBP2-201ENST00000339987 AP1S3Q96PC3 154 aa12.68□□□□□ -0.38
SDCBP2-201ENST00000339987 MSRB1Q9NZV6 116 aa12.68□□□□□ -0.38
SDCBP2-201ENST00000339987 NANOS2P60321 138 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms