RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 IGHV4OR15-8A0A075B7B6 117 aa7.06□□□□□ -1.28
PRDM9-201ENST00000296682 A0A087WW49 117 aa7.06□□□□□ -1.28
PRDM9-201ENST00000296682 CRXO43186 299 aaPredicted RBP7.06□□□□□ -1.28
PRDM9-201ENST00000296682 CTRLP40313 264 aa7.06□□□□□ -1.28
PRDM9-201ENST00000296682 SCGB2A2Q13296 93 aa7.06□□□□□ -1.28
PRDM9-201ENST00000296682 MYOZ3Q8TDC0 251 aa7.06□□□□□ -1.28
PRDM9-201ENST00000296682 DSCR9P59020 149 aa7.06□□□□□ -1.28
PRDM9-201ENST00000296682 OR11H1Q8NG94 326 aa7.06□□□□□ -1.28
PRDM9-201ENST00000296682 ZNF747Q9BV97 191 aa7.06□□□□□ -1.28
PRDM9-201ENST00000296682 APCP25054 2843 aa7.06□□□□□ -1.28
PRDM9-201ENST00000296682 HOXD3P31249 432 aaPredicted RBP7.05□□□□□ -1.28
PRDM9-201ENST00000296682 DEFB113Q30KQ7 82 aa7.05□□□□□ -1.28
PRDM9-201ENST00000296682 KLHL30-AS1Q8NEE0 82 aa7.05□□□□□ -1.28
PRDM9-201ENST00000296682 RPL39LQ96EH5 51 aaKnown RBP7.05□□□□□ -1.28
PRDM9-201ENST00000296682 AP1S3Q96PC3 154 aa7.05□□□□□ -1.28
PRDM9-201ENST00000296682 GCN1Q92616 2671 aaKnown RBP7.05□□□□□ -1.28
PRDM9-201ENST00000296682 A0A1B0GW15 77 aa7.05□□□□□ -1.28
PRDM9-201ENST00000296682 LINC01546A6NGU7 62 aa7.05□□□□□ -1.28
PRDM9-201ENST00000296682 DEFB131AP59861 70 aa7.05□□□□□ -1.28
PRDM9-201ENST00000296682 ZNF56Q15929 161 aa7.05□□□□□ -1.28
PRDM9-201ENST00000296682 TCTEX1D4Q5JR98 221 aa7.05□□□□□ -1.28
PRDM9-201ENST00000296682 GTSCR1Q86UQ5 136 aa7.05□□□□□ -1.28
PRDM9-201ENST00000296682 OR2K2Q8NGT1 345 aa7.05□□□□□ -1.28
PRDM9-201ENST00000296682 OVOL1O14753 267 aa7.05□□□□□ -1.28
PRDM9-201ENST00000296682 SRSF1Q07955 248 aaKnown RBP eCLIP7.05□□□□□ -1.28
PRDM9-201ENST00000296682 MS4A6AQ9H2W1 248 aa7.05□□□□□ -1.28
PRDM9-201ENST00000296682 K7EMI3 77 aa7.04□□□□□ -1.28
PRDM9-201ENST00000296682 VPREB3Q9UKI3 123 aa7.04□□□□□ -1.28
PRDM9-201ENST00000296682 PTTG1IPP53801 180 aa7.04□□□□□ -1.28
PRDM9-201ENST00000296682 IGHV4-31P0DP07 118 aa7.03□□□□□ -1.28
PRDM9-201ENST00000296682 PET117Q6UWS5 81 aa7.03□□□□□ -1.28
PRDM9-201ENST00000296682 APRG1Q8IVJ8 170 aa7.03□□□□□ -1.28
PRDM9-201ENST00000296682 ZNF580Q9UK33 172 aa7.03□□□□□ -1.28
PRDM9-201ENST00000296682 ZNF493Q6ZR52 646 aa7.03□□□□□ -1.28
PRDM9-201ENST00000296682 UBE2E2Q96LR5 201 aa7.03□□□□□ -1.28
PRDM9-201ENST00000296682 IGLC6P0CF74 106 aa7.03□□□□□ -1.28
PRDM9-201ENST00000296682 NPSP0C0P6 89 aa7.02□□□□□ -1.29
PRDM9-201ENST00000296682 GATA3P23771 443 aa7.02□□□□□ -1.29
PRDM9-201ENST00000296682 SCGB3A1Q96QR1 104 aa7.02□□□□□ -1.29
PRDM9-201ENST00000296682 U3KQK5 164 aa7.02□□□□□ -1.29
PRDM9-201ENST00000296682 GCSHP23434 173 aa7.02□□□□□ -1.29
PRDM9-201ENST00000296682 PCP2Q8IVA1 136 aa7.02□□□□□ -1.29
PRDM9-201ENST00000296682 GPHB5Q86YW7 130 aa7.02□□□□□ -1.29
PRDM9-201ENST00000296682 MDFICQ9P1T7 246 aa7.02□□□□□ -1.29
PRDM9-201ENST00000296682 LINC01559Q495D7 138 aa7.01□□□□□ -1.29
PRDM9-201ENST00000296682 ZC2HC1BQ5TFG8 222 aa7.01□□□□□ -1.29
PRDM9-201ENST00000296682 C9orf47Q6ZRZ4 202 aa7.01□□□□□ -1.29
PRDM9-201ENST00000296682 ZFAND2AQ8N6M9 145 aa7.01□□□□□ -1.29
PRDM9-201ENST00000296682 CNFNQ9BYD5 112 aa7.01□□□□□ -1.29
PRDM9-201ENST00000296682 RNF185Q96GF1 192 aa7.01□□□□□ -1.29
PRDM9-201ENST00000296682 JMJD8Q96S16 334 aa7.01□□□□□ -1.29
PRDM9-201ENST00000296682 CSTL1Q9H114 145 aa7.01□□□□□ -1.29
PRDM9-201ENST00000296682 TEP1Q99973 2627 aaKnown RBP7.01□□□□□ -1.29
PRDM9-201ENST00000296682 PPBPP02775 128 aa7□□□□□ -1.29
PRDM9-201ENST00000296682 NSUN5P1Q3KNT7 163 aa7□□□□□ -1.29
PRDM9-201ENST00000296682 NXT2Q9NPJ8 142 aaKnown RBP7□□□□□ -1.29
PRDM9-201ENST00000296682 XCL2Q9UBD3 114 aa7□□□□□ -1.29
PRDM9-201ENST00000296682 U3KQE9 123 aa7□□□□□ -1.29
PRDM9-201ENST00000296682 ZNF876PQ49A33 203 aa7□□□□□ -1.29
PRDM9-201ENST00000296682 DEFB125Q8N687 156 aa7□□□□□ -1.29
PRDM9-201ENST00000296682 UNC79Q9P2D8 2635 aa7□□□□□ -1.29
PRDM9-201ENST00000296682 LAGE3Q14657 143 aa7□□□□□ -1.29
PRDM9-201ENST00000296682 LINC01587Q99440 93 aa7□□□□□ -1.29
PRDM9-201ENST00000296682 SMR3AQ99954 134 aa7□□□□□ -1.29
PRDM9-201ENST00000296682 NBEAL2Q6ZNJ1 2754 aa7□□□□□ -1.29
PRDM9-201ENST00000296682 IGHV3-64A0A075B6Q5 118 aa6.99□□□□□ -1.29
PRDM9-201ENST00000296682 IGHV3-16A0A0C4DH30 117 aa6.99□□□□□ -1.29
PRDM9-201ENST00000296682 PSMB8P28062 276 aa6.99□□□□□ -1.29
PRDM9-201ENST00000296682 SFTA2Q6UW10 78 aa6.99□□□□□ -1.29
PRDM9-201ENST00000296682 MRPL35Q9NZE8 188 aaKnown RBP6.99□□□□□ -1.29
PRDM9-201ENST00000296682 ATRQ13535 2644 aa6.99□□□□□ -1.29
PRDM9-201ENST00000296682 RBAKDNA6NC62 111 aa6.99□□□□□ -1.29
PRDM9-201ENST00000296682 DLEU1O43261 78 aa6.99□□□□□ -1.29
PRDM9-201ENST00000296682 IGLV1-40P01703 118 aa6.99□□□□□ -1.29
PRDM9-201ENST00000296682 RIPPLY3P57055 190 aa6.99□□□□□ -1.29
PRDM9-201ENST00000296682 RNF151Q2KHN1 245 aa6.99□□□□□ -1.29
PRDM9-201ENST00000296682 DPH3P1Q9H4G8 78 aa6.99□□□□□ -1.29
PRDM9-201ENST00000296682 ST20Q9HBF5 79 aa6.99□□□□□ -1.29
PRDM9-201ENST00000296682 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.99□□□□□ -1.29
PRDM9-201ENST00000296682 OR4C5Q8NGB2 326 aa6.99□□□□□ -1.29
PRDM9-201ENST00000296682 OR1N2Q8NGR9 330 aa6.99□□□□□ -1.29
PRDM9-201ENST00000296682 NIPBLQ6KC79 2804 aaeCLIP6.99□□□□□ -1.29
PRDM9-201ENST00000296682 SUMO2P61956 95 aaKnown RBP6.98□□□□□ -1.29
PRDM9-201ENST00000296682 A0A096LNJ9 63 aa6.98□□□□□ -1.29
PRDM9-201ENST00000296682 A6NJY4 79 aa6.98□□□□□ -1.29
PRDM9-201ENST00000296682 IGHV3-53P01767 116 aa6.98□□□□□ -1.29
PRDM9-201ENST00000296682 CD300EQ496F6 205 aaPredicted RBP6.98□□□□□ -1.29
PRDM9-201ENST00000296682 TMEM61Q8N0U2 210 aa6.98□□□□□ -1.29
PRDM9-201ENST00000296682 CD5LO43866 347 aa6.98□□□□□ -1.29
PRDM9-201ENST00000296682 LGALS1P09382 135 aaKnown RBP6.98□□□□□ -1.29
PRDM9-201ENST00000296682 Q8N1Y9 231 aa6.98□□□□□ -1.29
PRDM9-201ENST00000296682 DLX4Q92988 240 aaPredicted RBP6.98□□□□□ -1.29
PRDM9-201ENST00000296682 Q6YL49 198 aa6.97□□□□□ -1.29
PRDM9-201ENST00000296682 MRPL53Q96EL3 112 aaKnown RBP6.97□□□□□ -1.29
PRDM9-201ENST00000296682 K7EP13 123 aa6.97□□□□□ -1.29
PRDM9-201ENST00000296682 IGKCP01834 107 aa6.97□□□□□ -1.29
PRDM9-201ENST00000296682 SCGB1D4Q6XE38 83 aa6.97□□□□□ -1.29
PRDM9-201ENST00000296682 SETXQ7Z333 2677 aaKnown RBP6.97□□□□□ -1.29
PRDM9-201ENST00000296682 H3BUA1 57 aa6.97□□□□□ -1.29
PRDM9-201ENST00000296682 J3QLI3 93 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms