RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Slc17a2Q5SZA1 478 aa11.65□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Ercc8Q8CFD5 397 aa11.65□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Fgfrl1Q91V87 529 aa11.65□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Leprotl1Q9CQ74 131 aa11.65□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Bhlha15Q9QYC3 197 aa11.65□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Olfr1328B1ARV2 313 aa11.65□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Hist1h2bfP10853 126 aa11.65□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Defa9P50707 93 aa11.65□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Rpl8P62918 257 aaKnown RBP11.65□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Hist1h2bbQ64475 126 aa11.65□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 SriQ6P069 198 aa11.65□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Hist1h2bkQ8CGP1 126 aaKnown RBP11.65□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Hist1h2bpQ8CGP2 126 aaKnown RBP11.65□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Cypt1Q8CH20 168 aa11.65□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Olfr877Q8VF62 311 aa11.65□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Igkv13-85A0A075B666 115 aa11.64□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Zfp874bQ7M6X2 447 aa11.64□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Sox21Q811W0 276 aa11.64□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Defa22Q8C1N8 93 aa11.64□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Q91WE4 72 aa11.64□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Olfr1024A2ASU7 327 aa11.64□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Plp1P60202 277 aa11.64□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Trappc1Q5NCF2 145 aa11.64□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Trav6d-4Q5R1I0 115 aa11.64□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Fam117aQ7TNF9 451 aa11.64□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 H2afb1Q9CQ70 111 aa11.64□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Cfap46E9Q2C0 2641 aa11.64□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Trbv1A0A0B4J1G7 116 aa11.64□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Olfr918E9PVZ7 325 aa11.64□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Rpl23P62830 140 aaKnown RBP11.64□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 St6galnac2P70277 373 aa11.64□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Olfr223Q8VF69 319 aa11.64□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Sumo3Q9Z172 110 aa11.64□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 A630076J17RikJ3QQ32 107 aa11.64□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Spock3Q8BKV0 436 aa11.64□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Olfr470Q8VF65 314 aa11.64□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Olfr1243Q8VGM7 305 aa11.64□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 MylkQ6PDN3 1941 aaKnown RBP11.64□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Slc35b1P97858 322 aa11.63□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Lhfpl4Q5U4E0 247 aa11.63□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Htr1dQ61224 374 aa11.63□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Duxbl2Q7TNE6 350 aa11.63□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 C330021F23RikQ8C7T0 141 aa11.63□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Znrf1Q91V17 227 aa11.63□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Igkv1-132A0A0B4J1H9 120 aa11.63□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Gm28044L7N1X0 119 aa11.63□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 GzmbP04187 247 aa11.63□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Egr1P08046 533 aa11.63□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Tmem11Q8BK08 190 aa11.63□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Nabp2Q8R2Y9 212 aa11.63□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Olfr1030Q8VFL5 318 aa11.63□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Prss41Q920S2 322 aa11.63□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Heatr1G3X9B1 2143 aaKnown RBP11.63□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Znf385cA2A5E6 429 aa11.63□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Srsf7Q8BL97 267 aaKnown RBP11.63□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Mrpl13Q9D1P0 178 aaKnown RBP11.63□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Cd200r1Q9ES57 326 aa11.63□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Tnfsf12O54907 249 aa11.63□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Olfr148Q60887 310 aa11.63□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Tbr1Q64336 681 aa11.63□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Olfr1183Q8VFF8 303 aa11.63□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 EsdQ9R0P3 282 aa11.63□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Defa37K9J724 93 aa11.62□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Khdc1bP0C7A0 126 aa11.62□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Defa5P28312 93 aa11.62□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Ankrd55Q8BLD6 626 aa11.62□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Crispld2Q8BZQ2 495 aa11.62□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Tstd1E9PY03 133 aa11.62□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Iqcf6G3UWF2 157 aa11.62□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Klk1b22P15948 259 aa11.62□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Nkx3-1P97436 237 aa11.62□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Gm10645Q3UPY1 145 aa11.62□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Olfr1202Q8VF98 309 aa11.62□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Tmem262D3Z338 116 aa11.62□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Gm5150Q1AN92 299 aa11.62□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Tmem140Q8BGY5 185 aa11.62□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Cdcp2Q8BQH6 427 aa11.62□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Olfr982Q8VGB3 321 aa11.62□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Mgst3Q9CPU4 153 aa11.62□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Ndufb3Q9CQZ6 104 aa11.62□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Shisal2bQ9D1Y9 158 aa11.62□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Sh2d6Q9D413 297 aa11.62□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Gm37797A0A1D5RLC8 261 aa11.62□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 LtbP41155 306 aa11.62□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Gatad1Q920S3 266 aa11.62□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 1700031F05RikB1AX30 191 aa11.61□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Olfr139Q60891 315 aa11.61□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Arl6ip6Q8BH07 226 aa11.61□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 AamdcQ8R0P4 122 aa11.61□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Prss22Q9ER10 306 aa11.61□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Trem3Q9JKE1 183 aa11.61□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Gm10439A2AJU2 433 aaKnown RBP11.61□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 1700084M14RikB1AT01 78 aa11.61□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Gm15114B1B0X6 433 aa11.61□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 P01783 136 aa11.61□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 AvpP35455 168 aa11.61□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Rps20P60867 119 aaKnown RBP11.61□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Tff1Q08423 87 aa11.61□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Olfr1362Q5SZZ8 308 aa11.61□□□□□ -0.55
Pcdha1-202ENSMUST00000193839 Slc25a47Q6IS41 310 aa11.61□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 51.4 ms