RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Glo1Q9CPU0 184 aa9.19□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Zcchc12Q9CZA5 402 aa9.19□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Mgat4cQ9D306 478 aa9.19□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Atp6v1g2Q9WTT4 118 aa9.19□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Kmt2aP55200 3966 aa9.19□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 A0A286YDM5 308 aa9.18□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 H60bB1B212 251 aa9.18□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Gm7075D3Z497 112 aa9.18□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 PvalbP32848 110 aa9.18□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Cd69P37217 199 aa9.18□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Mcpt8P43430 247 aa9.18□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Acyp2P56375 106 aa9.18□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Tbpl2Q6SJ95 350 aa9.18□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Olfr1106Q7TR57 312 aa9.18□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Olfr1279Q8VF38 313 aa9.18□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Olfr810Q8VFH9 312 aa9.18□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Olfr410Q8VFX7 315 aa9.18□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Olfr1271Q8VG62 305 aa9.18□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Ripply3Q924S9 152 aa9.18□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Q99LU8 229 aa9.18□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Naa60Q9DBU2 242 aa9.18□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 P2ry14Q9ESG6 338 aa9.18□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 HpgdsQ9JHF7 199 aa9.18□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Trbv15A0A0A6YYE3 115 aa9.17□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Vma21-psA0A140T8R2 101 aa9.17□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Olfr1189A2AV11 306 aa9.17□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Esp23A8R0V5 104 aa9.17□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Amn1B8JKV0 258 aa9.17□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Gm10036E9PYL9 178 aaKnown RBP9.17□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 P04944 107 aa9.17□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Lgals3P16110 264 aaKnown RBP9.17□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Ptbp1P17225 527 aaKnown RBP9.17□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Psmb8P28063 276 aa9.17□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 St8sia3Q64689 380 aa9.17□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Rasl11aQ6IMB1 242 aa9.17□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Znf740Q6NZQ6 180 aa9.17□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 March1Q6NZQ8 289 aa9.17□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Lrtm2Q8BGX3 370 aa9.17□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Tor2aQ8R1J9 321 aa9.17□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Arrdc1Q99KN1 434 aa9.17□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Mrps16Q9CPX7 135 aaKnown RBP9.17□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Insl6Q9QY05 191 aa9.17□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Hsf4Q9R0L1 492 aa9.17□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 RbpmsQ9WVB0 197 aaKnown RBP9.17□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Csmd3Q80T79 3707 aa9.17□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Tmem201A2A8U2 664 aa9.16□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Olfr1124A2AT86 318 aa9.16□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Hbb-bh2B2RVB7 147 aa9.16□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Vmn1r124D3YTX4 307 aa9.16□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Gm6882J3KMT3 313 aa9.16□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Olfr117L7N1Z1 317 aa9.16□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Sult2a4L7N245 285 aa9.16□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Socs3O35718 225 aa9.16□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 H2-DMb1P35737 261 aa9.16□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 VhlP40338 181 aa9.16□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Dynlt3P56387 116 aa9.16□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Fam219bQ14DQ1 197 aa9.16□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 SelenohQ3UQA7 116 aa9.16□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Gm10662Q3UT86 313 aa9.16□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Gls2Q571F8 602 aa9.16□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Spcs3Q6ZWQ7 180 aa9.16□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Dppa1Q810Y7 116 aa9.16□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Gphb5Q812B2 130 aa9.16□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Ahsa1Q8BK64 338 aa9.16□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Gm4894Q8CA09 118 aa9.16□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Pdcd10Q8VE70 212 aa9.16□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Olfr130Q8VFC1 317 aa9.16□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Mrps14Q9CR88 128 aa9.16□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Gpx8Q9D7B7 209 aa9.16□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 NagkQ9QZ08 343 aa9.16□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Gm13547A2ARC0 163 aa9.15□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Gm14744B1AVU4 173 aa9.15□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Sult6b2B7ZWN4 290 aa9.15□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Cldn34c3J3QJW5 233 aa9.15□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Cldn34c2J3QNM1 233 aa9.15□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Gm4791J3QQ14 102 aa9.15□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Gm4778L7N229 365 aa9.15□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 P01748 117 aa9.15□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 H2-Q10P01898 325 aa9.15□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Ear1P97426 155 aa9.15□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Fthl17fQ3SXD2 176 aa9.15□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Nhlh2Q64221 135 aa9.15□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 SepsecsQ6P6M7 504 aa9.15□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Olfr923Q7TRB9 317 aa9.15□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 IrgcQ8C262 412 aa9.15□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Cldn34c1Q8K193 234 aa9.15□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 GcaQ8VC88 220 aa9.15□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Ms4a6cQ99N08 217 aa9.15□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Cyb5bQ9CQX2 146 aaKnown RBP9.15□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 3110018I06RikQ9CXS0 120 aa9.15□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 5430402E10RikQ9D3N5 173 aa9.15□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 TrirQ9D735 173 aa9.15□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Pard6aQ9Z101 346 aa9.15□□□□□ -0.94
Ccdc28b-202ENSMUST00000106035 Rhox3gB9EJQ9 160 aa9.14□□□□□ -0.95
Ccdc28b-202ENSMUST00000106035 Bpifa2P07743 235 aa9.14□□□□□ -0.95
Ccdc28b-202ENSMUST00000106035 Rag2P21784 527 aa9.14□□□□□ -0.95
Ccdc28b-202ENSMUST00000106035 Slc45a2P58355 530 aa9.14□□□□□ -0.95
Ccdc28b-202ENSMUST00000106035 Rps10P63325 165 aaKnown RBP9.14□□□□□ -0.95
Ccdc28b-202ENSMUST00000106035 Gm10803Q3TZS6 135 aa9.14□□□□□ -0.95
Ccdc28b-202ENSMUST00000106035 Rnase11Q5GAM9 192 aa9.14□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 36 ms