RNA–Protein interactions for RNA: ENSMUST00000055506.8

Gtf3c1-201, Transcript of General transcription factor 3C polypeptide 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Gtf3c1, Length 6,961 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c1-201ENSMUST00000055506 Ltbp1Q8CG19 1712 aa9.48□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Trav3n-3A0A0G2JEM0 114 aa9.48□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 SlaQ60898 281 aa9.48□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Sh3bgrl3Q91VW3 93 aa9.48□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Cpsf4lE9Q2N0 280 aa9.48□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Zfp936Q3ULA8 456 aa9.48□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 MsmbO08540 113 aa9.48□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Olfr1380Q7TQT5 311 aa9.48□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Rnd1Q8BLR7 232 aa9.48□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Nhlrc1Q8BR37 401 aa9.48□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Pxt1Q8K459 51 aa9.48□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Zic3Q62521 466 aa9.47□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Rnase6Q9D244 153 aa9.47□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Frem3Q5H8B9 2123 aa9.47□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 6430628N08RikA0A0U1RQ45 177 aa9.47□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Rpl23P62830 140 aaKnown RBP9.47□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Hist1h1tQ07133 208 aa9.47□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Gm10277Q6R5C6 214 aa9.47□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Zc3h3Q8CHP0 950 aa9.47□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Gm45783A0A1B0GT48 74 aa9.47□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 P01635 115 aa9.47□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 C1ql2Q8CFR0 287 aa9.47□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Rspo2Q8BFU0 243 aa9.47□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Lamtor2Q9JHS3 125 aa9.47□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Adamtsl3G3UXC7 1706 aa9.47□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Gm44501A8R0T9 150 aa9.47□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Hist1h2bfP10853 126 aa9.47□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Hist1h2bbQ64475 126 aa9.47□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Hist1h2bkQ8CGP1 126 aaKnown RBP9.47□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Hist1h2bpQ8CGP2 126 aaKnown RBP9.47□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Olfr223Q8VF69 319 aa9.47□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 D430019H16RikJ3QPM6 83 aa9.47□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Cd33Q63994 403 aa9.47□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Znf329Q6GQR8 522 aa9.47□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Fam53bQ8BGR5 422 aa9.47□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Il17bQ9QXT6 180 aa9.47□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Ighv5-4A0A075B5P9 117 aa9.46□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Gm6793B2RXM2 351 aa9.46□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Tstd1E9PY03 133 aa9.46□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 TifabQ8JZM6 147 aa9.46□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Gtf3aQ8VHT7 364 aa9.46□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 4930447A16RikQ9D5F6 132 aa9.46□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Ank1Q02357 1862 aa9.46□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Gtf3c1Q8K284 2101 aa9.46□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Trav7-4A0A075B6C1 113 aa9.46□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 E430018J23RikE9PZQ8 461 aa9.46□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Pilrb2Q2YFS1 225 aa9.46□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Trav7d-4Q5R1H9 113 aa9.46□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Olfr875Q7TRE5 310 aa9.46□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Lims1Q99JW4 325 aa9.46□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Pla2g2fQ9QZT4 168 aa9.46□□□□□ -0.89
Gtf3c1-201ENSMUST00000055506 Ighv1-22A0A075B5U7 117 aa9.46□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 Iqcf6G3UWF2 157 aa9.46□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 Ly6fP35460 134 aa9.46□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 Cd96Q3U0X8 602 aa9.46□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 Tmem50aQ9CXL1 157 aa9.46□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 CklfQ9DAS1 152 aa9.46□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 PerpQ9JK95 193 aa9.46□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 Ncor2Q9WU42 2472 aaKnown RBP9.46□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 Tmem29A2ANF5 204 aa9.46□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 A6H6Q4 206 aa9.46□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 Q3U1D9 316 aa9.46□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 Vdac1Q60932 296 aaKnown RBP9.46□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 Foxl1Q64731 336 aa9.46□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 Tspan2Q922J6 221 aa9.46□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 GgctQ9D7X8 188 aa9.46□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 Pglyrp3A1A547 347 aa9.46□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 Gm21900J3QP38 180 aa9.46□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 P03976 113 aa9.46□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 Wdr5bQ9D7H2 328 aa9.46□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 Sdf2l1Q9ESP1 221 aa9.46□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 Lhx9Q9WUH2 397 aa9.46□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 Med12A2AGH6 2190 aa9.46□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 Med12lQ8BQM9 2157 aa9.46□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 Igkv10-96A0A140T8M1 115 aa9.45□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 Gm45844A0A1B0GRQ2 137 aa9.45□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 UngP97931 306 aa9.45□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 LgalslbQ7TPX9 165 aa9.45□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 Gatad1Q920S3 266 aa9.45□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 GgactQ923B0 149 aa9.45□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 Fdx2Q9CPW2 174 aa9.45□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 Opn4Q9QXZ9 521 aa9.45□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 Gm17727E9Q4V7 109 aa9.45□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 Rnase2aQ8K196 155 aa9.45□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 Lrrc25Q8K1T1 297 aa9.45□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 Trbv30A0A0B4J1P1 111 aa9.45□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 Psg18B2RSG7 476 aa9.45□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 Srsf6Q3TWW8 339 aaKnown RBP9.45□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 TirapQ99JY1 241 aa9.45□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 Tcrg-C2A0A075B5Z2 167 aa9.45□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 P01853 167 aa9.45□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 C2cd4dP0CG09 341 aa9.45□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 Ccl2P10148 148 aa9.45□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 Col9a1Q05722 921 aa9.45□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 RprmlQ3URD2 117 aa9.45□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 Zfp248Q640N4 576 aa9.45□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 Olfr523Q8VFE7 317 aa9.45□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 Cacng8Q8VHW2 423 aa9.45□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 P04212 136 aa9.45□□□□□ -0.9
Gtf3c1-201ENSMUST00000055506 Ceacam1P31809 521 aa9.45□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 35.8 ms