RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Ighv8-9A0A0G2JET1 119 aa8.33□□□□□ -1.08
Syne1-201ENSMUST00000041639 BC030500E9Q6W0 185 aa8.33□□□□□ -1.08
Syne1-201ENSMUST00000041639 Gm21882J3QN86 361 aa8.33□□□□□ -1.08
Syne1-201ENSMUST00000041639 RprmlQ3URD2 117 aa8.33□□□□□ -1.08
Syne1-201ENSMUST00000041639 Cma2Q91VB1 246 aa8.33□□□□□ -1.08
Syne1-201ENSMUST00000041639 Defb3Q9WTL0 63 aa8.33□□□□□ -1.08
Syne1-201ENSMUST00000041639 Gm6525A0A0A6YW33 106 aa8.33□□□□□ -1.08
Syne1-201ENSMUST00000041639 Gm45844A0A1B0GRQ2 137 aa8.33□□□□□ -1.08
Syne1-201ENSMUST00000041639 Vmn1r1E9PVR6 306 aa8.33□□□□□ -1.08
Syne1-201ENSMUST00000041639 Gm21874J3QNZ6 232 aa8.33□□□□□ -1.08
Syne1-201ENSMUST00000041639 Ifitm5O88728 134 aa8.33□□□□□ -1.08
Syne1-201ENSMUST00000041639 Rps20P60867 119 aaKnown RBP8.33□□□□□ -1.08
Syne1-201ENSMUST00000041639 Tmem88bQ3TYP4 173 aa8.33□□□□□ -1.08
Syne1-201ENSMUST00000041639 Shisa3Q3UPR0 238 aa8.33□□□□□ -1.08
Syne1-201ENSMUST00000041639 Gm5615Q3UW02 101 aa8.33□□□□□ -1.08
Syne1-201ENSMUST00000041639 SmpxQ9DC77 85 aa8.33□□□□□ -1.08
Syne1-201ENSMUST00000041639 Olfr965Q7TRA7 312 aa8.33□□□□□ -1.08
Syne1-201ENSMUST00000041639 Immp2lQ8BPT6 175 aa8.33□□□□□ -1.08
Syne1-201ENSMUST00000041639 Loxl4Q924C6 757 aa8.33□□□□□ -1.08
Syne1-201ENSMUST00000041639 AmtnQ9D3J8 213 aa8.33□□□□□ -1.08
Syne1-201ENSMUST00000041639 Fam208bQ5DTT3 2382 aa8.33□□□□□ -1.08
Syne1-201ENSMUST00000041639 Irf2bp2E9Q1P8 570 aa8.33□□□□□ -1.08
Syne1-201ENSMUST00000041639 Gm21900J3QP38 180 aa8.33□□□□□ -1.08
Syne1-201ENSMUST00000041639 Tac3P55099 116 aa8.33□□□□□ -1.08
Syne1-201ENSMUST00000041639 GalnsQ571E4 520 aa8.33□□□□□ -1.08
Syne1-201ENSMUST00000041639 GgactQ923B0 149 aa8.33□□□□□ -1.08
Syne1-201ENSMUST00000041639 MNCb-2875Q9DCB3 74 aa8.33□□□□□ -1.08
Syne1-201ENSMUST00000041639 H2-Ab1P01921 265 aa8.32□□□□□ -1.08
Syne1-201ENSMUST00000041639 Olfr593Q8VF28 327 aa8.32□□□□□ -1.08
Syne1-201ENSMUST00000041639 Sfxn3Q91V61 321 aa8.32□□□□□ -1.08
Syne1-201ENSMUST00000041639 H2afb1Q9CQ70 111 aa8.32□□□□□ -1.08
Syne1-201ENSMUST00000041639 Baz2aQ91YE5 1889 aaKnown RBP8.32□□□□□ -1.08
Syne1-201ENSMUST00000041639 Igf2rQ07113 2483 aaKnown RBP8.32□□□□□ -1.08
Syne1-201ENSMUST00000041639 Gm19410A0A140LJC7 2098 aa8.32□□□□□ -1.08
Syne1-201ENSMUST00000041639 1700025B11RikA0A087WNZ6 93 aa8.32□□□□□ -1.08
Syne1-201ENSMUST00000041639 Wisp1O54775 367 aa8.32□□□□□ -1.08
Syne1-201ENSMUST00000041639 Ren2P00796 401 aa8.32□□□□□ -1.08
Syne1-201ENSMUST00000041639 P01783 136 aa8.32□□□□□ -1.08
Syne1-201ENSMUST00000041639 Slc25a35Q5SWT3 300 aa8.32□□□□□ -1.08
Syne1-201ENSMUST00000041639 Cd200r5Q8BTP3 270 aa8.32□□□□□ -1.08
Syne1-201ENSMUST00000041639 Mettl26Q9DCS2 204 aa8.32□□□□□ -1.08
Syne1-201ENSMUST00000041639 Ndufa7Q9Z1P6 113 aaKnown RBP8.32□□□□□ -1.08
Syne1-201ENSMUST00000041639 Fam162bQ9CX19 157 aa8.32□□□□□ -1.08
Syne1-201ENSMUST00000041639 Dctn5Q9QZB9 182 aa8.32□□□□□ -1.08
Syne1-201ENSMUST00000041639 Col4a3Q9QZS0 1669 aa8.32□□□□□ -1.08
Syne1-201ENSMUST00000041639 Fndc7A2AED3 737 aa8.32□□□□□ -1.08
Syne1-201ENSMUST00000041639 Gm10428J3QNV7 132 aa8.32□□□□□ -1.08
Syne1-201ENSMUST00000041639 Csf2rb2P26954 878 aa8.32□□□□□ -1.08
Syne1-201ENSMUST00000041639 Klk13Q8CGR6 276 aa8.32□□□□□ -1.08
Syne1-201ENSMUST00000041639 Nup37Q9CWU9 326 aa8.32□□□□□ -1.08
Syne1-201ENSMUST00000041639 Shisal2bQ9D1Y9 158 aa8.32□□□□□ -1.08
Syne1-201ENSMUST00000041639 EsdQ9R0P3 282 aa8.32□□□□□ -1.08
Syne1-201ENSMUST00000041639 C1qtnf4Q8R066 326 aa8.32□□□□□ -1.08
Syne1-201ENSMUST00000041639 Phf7Q9DAG9 307 aa8.32□□□□□ -1.08
Syne1-201ENSMUST00000041639 Ighv5-9A0A075B5Q2 117 aa8.32□□□□□ -1.08
Syne1-201ENSMUST00000041639 Spint5J3KMK8 105 aa8.32□□□□□ -1.08
Syne1-201ENSMUST00000041639 Efnb1P52795 345 aa8.32□□□□□ -1.08
Syne1-201ENSMUST00000041639 Gm10283Q8C3L5 117 aa8.32□□□□□ -1.08
Syne1-201ENSMUST00000041639 GaptQ8CB93 157 aa8.32□□□□□ -1.08
Syne1-201ENSMUST00000041639 Chrdl2Q8VEA6 426 aa8.32□□□□□ -1.08
Syne1-201ENSMUST00000041639 Errfi1Q99JZ7 461 aa8.32□□□□□ -1.08
Syne1-201ENSMUST00000041639 Ighv5-4A0A075B5P9 117 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 Gm12355A2A4X6 163 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 Ifitm7G3X9Z2 141 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 Srsf3P84104 164 aaKnown RBP8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 Gm5150Q1AN92 299 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 Olfr553Q7TRS6 326 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 Ndufs8Q8K3J1 212 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 St6galnac6Q9JM95 333 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 Gm45871A0A1B0GRI9 540 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 Zfp983E9PUT0 460 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 Gata2O09100 480 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 Tmem95P0DJF3 176 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 Klk10Q99M20 278 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 Scrt1Q99M85 348 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 Gm16442D3YZG3 307 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 Gm14548E9Q1Z6 680 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 Smr2O09133 150 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 Klf12O35738 402 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 Csn3P06796 181 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 SftpcP21841 193 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 Zglp1Q1WG82 266 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 Bsph1Q3UW26 133 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 GfralQ6SJE0 393 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 2210407C18RikQ6YI28 220 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 Olfr1178Q7TR20 323 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 4930544G11RikQ9CR99 193 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 9330161L09RikQ9D253 136 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 EppinQ9DA01 134 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 V1ra8Q9EQ48 279 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 Tcf23Q9JLR5 209 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 Zfp646Q6NV66 1788 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 Tcrg-C2A0A075B5Z2 167 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 Scgb1b19F6WYW0 93 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 P01853 167 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 P06344 263 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 Gm5148Q8BGG2 154 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 5930422O12RikQ8C4Y4 123 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 Nhlrc3Q8CCH2 347 aa8.31□□□□□ -1.08
Syne1-201ENSMUST00000041639 Mrpl51Q9CPY1 128 aa8.31□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 129.3 ms