RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 SIGMAR1Q99720 223 aa10.57□□□□□ -0.72
PHGDH-233ENST00000642021 COL12A1Q99715 3063 aa10.57□□□□□ -0.72
PHGDH-233ENST00000642021 TRAV40A0A0B4J280 105 aa10.56□□□□□ -0.72
PHGDH-233ENST00000642021 K7EMI3 77 aa10.56□□□□□ -0.72
PHGDH-233ENST00000642021 GTF2H5Q6ZYL4 71 aa10.56□□□□□ -0.72
PHGDH-233ENST00000642021 METTL26Q96S19 204 aa10.56□□□□□ -0.72
PHGDH-233ENST00000642021 TMEM160Q9NX00 188 aa10.56□□□□□ -0.72
PHGDH-233ENST00000642021 GCSHP23434 173 aa10.56□□□□□ -0.72
PHGDH-233ENST00000642021 EEF1AKMT3Q96AZ1 226 aa10.56□□□□□ -0.72
PHGDH-233ENST00000642021 MRPL35Q9NZE8 188 aaKnown RBP10.56□□□□□ -0.72
PHGDH-233ENST00000642021 U3KQE9 123 aa10.56□□□□□ -0.72
PHGDH-233ENST00000642021 DEFB1P60022 68 aa10.55□□□□□ -0.72
PHGDH-233ENST00000642021 LMO4P61968 165 aa10.55□□□□□ -0.72
PHGDH-233ENST00000642021 KLRB1Q12918 225 aa10.55□□□□□ -0.72
PHGDH-233ENST00000642021 C9orf47Q6ZRZ4 202 aa10.55□□□□□ -0.72
PHGDH-233ENST00000642021 C20orf173Q96LM9 149 aa10.55□□□□□ -0.72
PHGDH-233ENST00000642021 BPESC1Q9GZL8 116 aa10.55□□□□□ -0.72
PHGDH-233ENST00000642021 HIVEP3Q5T1R4 2406 aa10.55□□□□□ -0.72
PHGDH-233ENST00000642021 TRBV25-1A0A075B6N4 114 aa10.55□□□□□ -0.72
PHGDH-233ENST00000642021 TRBV7-9A0A0J9YWB2 115 aa10.55□□□□□ -0.72
PHGDH-233ENST00000642021 A0A1W2PPM0 123 aa10.55□□□□□ -0.72
PHGDH-233ENST00000642021 EFNA4P52798 201 aa10.55□□□□□ -0.72
PHGDH-233ENST00000642021 FAM110AQ9BQ89 295 aa10.55□□□□□ -0.72
PHGDH-233ENST00000642021 SPXQ9BT56 116 aa10.55□□□□□ -0.72
PHGDH-233ENST00000642021 IGHV3OR16-10A0A075B7F0 116 aa10.54□□□□□ -0.72
PHGDH-233ENST00000642021 K7ERJ3 54 aa10.54□□□□□ -0.72
PHGDH-233ENST00000642021 SPANXN1Q5VSR9 72 aa10.54□□□□□ -0.72
PHGDH-233ENST00000642021 C5orf56Q8N8D9 126 aa10.54□□□□□ -0.72
PHGDH-233ENST00000642021 MAPKAPK5-AS1Q8N8E1 139 aa10.54□□□□□ -0.72
PHGDH-233ENST00000642021 CHAC1Q9BUX1 264 aa10.54□□□□□ -0.72
PHGDH-233ENST00000642021 H3BVH4 76 aa10.54□□□□□ -0.72
PHGDH-233ENST00000642021 DPM2O94777 84 aa10.54□□□□□ -0.72
PHGDH-233ENST00000642021 ID1P41134 155 aa10.54□□□□□ -0.72
PHGDH-233ENST00000642021 GEMIN7Q9H840 131 aaKnown RBP10.54□□□□□ -0.72
PHGDH-233ENST00000642021 UBTD1Q9HAC8 227 aa10.54□□□□□ -0.72
PHGDH-233ENST00000642021 TRBV7-1A0A0A6YYK4 115 aa10.54□□□□□ -0.72
PHGDH-233ENST00000642021 LAGE3Q14657 143 aa10.54□□□□□ -0.72
PHGDH-233ENST00000642021 C16orf92Q96LL3 132 aa10.54□□□□□ -0.72
PHGDH-233ENST00000642021 SPCS1Q9Y6A9 102 aa10.54□□□□□ -0.72
PHGDH-233ENST00000642021 MAP1AP78559 2803 aaPredicted RBP10.53□□□□□ -0.72
PHGDH-233ENST00000642021 UNQ9165/PRO28630Q6UXU0 137 aa10.53□□□□□ -0.72
PHGDH-233ENST00000642021 HIGD1BQ9P298 99 aa10.53□□□□□ -0.72
PHGDH-233ENST00000642021 TNFRSF18Q9Y5U5 241 aa10.53□□□□□ -0.72
PHGDH-233ENST00000642021 NPFFO15130 113 aa10.53□□□□□ -0.72
PHGDH-233ENST00000642021 ATP5LO75964 103 aa10.53□□□□□ -0.72
PHGDH-233ENST00000642021 TRBV12-3P01733 135 aa10.53□□□□□ -0.72
PHGDH-233ENST00000642021 ATP5G2Q06055 141 aa10.53□□□□□ -0.72
PHGDH-233ENST00000642021 SPTAN1Q13813 2472 aaKnown RBP10.52□□□□□ -0.72
PHGDH-233ENST00000642021 IGHV4-4A0A075B6R2 117 aa10.52□□□□□ -0.73
PHGDH-233ENST00000642021 SMIM13P0DJ93 91 aa10.52□□□□□ -0.73
PHGDH-233ENST00000642021 GPHB5Q86YW7 130 aa10.52□□□□□ -0.73
PHGDH-233ENST00000642021 MYOZ3Q8TDC0 251 aa10.52□□□□□ -0.73
PHGDH-233ENST00000642021 MRPL53Q96EL3 112 aaKnown RBP10.52□□□□□ -0.73
PHGDH-233ENST00000642021 SAMD5Q5TGI4 173 aa10.52□□□□□ -0.73
PHGDH-233ENST00000642021 GLMPQ8WWB7 406 aa10.52□□□□□ -0.73
PHGDH-233ENST00000642021 TSPAN13O95857 204 aa10.51□□□□□ -0.73
PHGDH-233ENST00000642021 PHLDA1Q8WV24 401 aaPredicted RBP10.51□□□□□ -0.73
PHGDH-233ENST00000642021 ITLN2Q8WWU7 325 aaPredicted RBP10.51□□□□□ -0.73
PHGDH-233ENST00000642021 TRAV41A0A0B4J266 112 aa10.5□□□□□ -0.73
PHGDH-233ENST00000642021 SRSF1Q07955 248 aaKnown RBP eCLIP10.5□□□□□ -0.732e-10■■■□□ 18.2
PHGDH-233ENST00000642021 KLK15Q9H2R5 256 aa10.5□□□□□ -0.73
PHGDH-233ENST00000642021 A0A087WX48 190 aa10.5□□□□□ -0.73
PHGDH-233ENST00000642021 M0R381 172 aa10.5□□□□□ -0.73
PHGDH-233ENST00000642021 ARL3P36405 182 aa10.5□□□□□ -0.73
PHGDH-233ENST00000642021 NEGR1Q7Z3B1 354 aa10.5□□□□□ -0.73
PHGDH-233ENST00000642021 ZFAND2AQ8N6M9 145 aa10.5□□□□□ -0.73
PHGDH-233ENST00000642021 NHP2Q9NX24 153 aaKnown RBP10.5□□□□□ -0.73
PHGDH-233ENST00000642021 FABP2P12104 132 aa10.49□□□□□ -0.73
PHGDH-233ENST00000642021 C19orf54Q5BKX5 351 aa10.49□□□□□ -0.73
PHGDH-233ENST00000642021 NCOR2Q9Y618 2525 aa10.49□□□□□ -0.73
PHGDH-233ENST00000642021 CHD8Q9HCK8 2581 aa10.49□□□□□ -0.73
PHGDH-233ENST00000642021 ATP5J2P56134 94 aa10.49□□□□□ -0.73
PHGDH-233ENST00000642021 PSMG4Q5JS54 123 aa10.49□□□□□ -0.73
PHGDH-233ENST00000642021 BRD3OSQ6XYD6 125 aa10.49□□□□□ -0.73
PHGDH-233ENST00000642021 CEND1Q8N111 149 aa10.49□□□□□ -0.73
PHGDH-233ENST00000642021 TM2D2Q9BX73 214 aa10.49□□□□□ -0.73
PHGDH-233ENST00000642021 TCTEX1D4Q5JR98 221 aa10.48□□□□□ -0.73
PHGDH-233ENST00000642021 RASL10AQ92737 203 aa10.48□□□□□ -0.73
PHGDH-233ENST00000642021 RPL39LQ96EH5 51 aaKnown RBP10.48□□□□□ -0.73
PHGDH-233ENST00000642021 SMIM2Q9BVW6 85 aa10.48□□□□□ -0.73
PHGDH-233ENST00000642021 F6UB75 175 aa10.48□□□□□ -0.73
PHGDH-233ENST00000642021 GATA3P23771 443 aa10.48□□□□□ -0.73
PHGDH-233ENST00000642021 C14orf178Q8N769 122 aaPredicted RBP10.48□□□□□ -0.73
PHGDH-233ENST00000642021 MRAP2Q96G30 205 aa10.48□□□□□ -0.73
PHGDH-233ENST00000642021 SPTBN4Q9H254 2564 aa10.48□□□□□ -0.73
PHGDH-233ENST00000642021 C9orf139Q6ZV77 190 aa10.48□□□□□ -0.73
PHGDH-233ENST00000642021 ABCA2Q9BZC7 2435 aa10.47□□□□□ -0.73
PHGDH-233ENST00000642021 OR5A1Q8NGJ0 315 aa10.47□□□□□ -0.73
PHGDH-233ENST00000642021 AGRNO00468 2067 aa10.47□□□□□ -0.73
PHGDH-233ENST00000642021 IGKV3-7A0A075B6H7 116 aa10.47□□□□□ -0.73
PHGDH-233ENST00000642021 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.47□□□□□ -0.73
PHGDH-233ENST00000642021 SOCS3O14543 225 aa10.47□□□□□ -0.73
PHGDH-233ENST00000642021 IGHV3-11P01762 117 aa10.47□□□□□ -0.73
PHGDH-233ENST00000642021 MOB4Q9Y3A3 225 aa10.47□□□□□ -0.73
PHGDH-233ENST00000642021 C19orf84I3L1E1 186 aa10.46□□□□□ -0.73
PHGDH-233ENST00000642021 GNRH2O43555 120 aa10.46□□□□□ -0.73
PHGDH-233ENST00000642021 ANXA2RQ3ZCQ2 193 aa10.46□□□□□ -0.73
PHGDH-233ENST00000642021 A4D1N5 150 aa10.46□□□□□ -0.74
PHGDH-233ENST00000642021 OR11H12B2RN74 326 aa10.46□□□□□ -0.74
PHGDH-233ENST00000642021 RNF223E7ERA6 249 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 195.6 ms