RNA–Protein interactions for RNA: ENST00000638417.1

MYCN-202, Transcript of MYCN proto-oncogene, bHLH transcription factor, humanhuman

TSL 2 BASIC

Gene MYCN, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYCN-202ENST00000638417 YPEL4Q96NS1 127 aa11.2□□□□□ -0.62
MYCN-202ENST00000638417 C11orf21Q9P2W6 132 aa11.2□□□□□ -0.62
MYCN-202ENST00000638417 C7orf71A4D174 169 aa11.19□□□□□ -0.62
MYCN-202ENST00000638417 CXCL1P09341 107 aa11.19□□□□□ -0.62
MYCN-202ENST00000638417 Q6AWC8 147 aa11.19□□□□□ -0.62
MYCN-202ENST00000638417 NEU1Q99519 415 aa11.19□□□□□ -0.62
MYCN-202ENST00000638417 DNAH9Q9NYC9 4486 aa11.19□□□□□ -0.62
MYCN-202ENST00000638417 IGKV3D-20A0A0C4DH25 116 aa11.18□□□□□ -0.62
MYCN-202ENST00000638417 GRIFINA4D1Z8 144 aa11.18□□□□□ -0.62
MYCN-202ENST00000638417 SPINK4O60575 86 aa11.18□□□□□ -0.62
MYCN-202ENST00000638417 MUC21Q5SSG8 566 aa11.18□□□□□ -0.62
MYCN-202ENST00000638417 TRPT1Q86TN4 253 aaKnown RBP11.18□□□□□ -0.62
MYCN-202ENST00000638417 GTSF1Q8WW33 167 aa11.18□□□□□ -0.62
MYCN-202ENST00000638417 XKRY2A2RUG3 117 aa11.17□□□□□ -0.62
MYCN-202ENST00000638417 HIGD1CA8MV81 97 aa11.17□□□□□ -0.62
MYCN-202ENST00000638417 RPL35AP18077 110 aaKnown RBP11.17□□□□□ -0.62
MYCN-202ENST00000638417 LINC01559Q495D7 138 aa11.17□□□□□ -0.62
MYCN-202ENST00000638417 PGLYRP4Q96LB8 373 aa11.17□□□□□ -0.62
MYCN-202ENST00000638417 CLUHP3Q96NS8 147 aa11.17□□□□□ -0.62
MYCN-202ENST00000638417 NAT8BQ9UHF3 227 aa11.17□□□□□ -0.62
MYCN-202ENST00000638417 RPS20P60866 119 aaKnown RBP11.17□□□□□ -0.62
MYCN-202ENST00000638417 NUP35Q8NFH5 326 aa11.17□□□□□ -0.62
MYCN-202ENST00000638417 FAM210BQ96KR6 192 aa11.17□□□□□ -0.62
MYCN-202ENST00000638417 TPPP3Q9BW30 176 aa11.17□□□□□ -0.62
MYCN-202ENST00000638417 TRBV24-1A0A075B6N3 115 aa11.16□□□□□ -0.62
MYCN-202ENST00000638417 CRXO43186 299 aaPredicted RBP11.16□□□□□ -0.62
MYCN-202ENST00000638417 ZNF324O75467 553 aaPredicted RBP11.16□□□□□ -0.62
MYCN-202ENST00000638417 ANXA2RQ3ZCQ2 193 aa11.16□□□□□ -0.62
MYCN-202ENST00000638417 BTF3L4Q96K17 158 aa11.16□□□□□ -0.62
MYCN-202ENST00000638417 GFRA4Q9GZZ7 299 aa11.16□□□□□ -0.62
MYCN-202ENST00000638417 XCL2Q9UBD3 114 aa11.16□□□□□ -0.62
MYCN-202ENST00000638417 NUTF2P61970 127 aaKnown RBP11.15□□□□□ -0.62
MYCN-202ENST00000638417 ZNF575Q86XF7 245 aa11.15□□□□□ -0.62
MYCN-202ENST00000638417 PYGO2Q9BRQ0 406 aa11.15□□□□□ -0.62
MYCN-202ENST00000638417 FAM231BA6NCW3 169 aa11.14□□□□□ -0.63
MYCN-202ENST00000638417 RAB5AP20339 215 aa11.14□□□□□ -0.63
MYCN-202ENST00000638417 MRPL54Q6P161 138 aaKnown RBP11.14□□□□□ -0.63
MYCN-202ENST00000638417 FAM159AQ6UWV7 190 aa11.14□□□□□ -0.63
MYCN-202ENST00000638417 TRAV9-1A0A075B6T8 112 aa11.14□□□□□ -0.63
MYCN-202ENST00000638417 GNRH2O43555 120 aa11.14□□□□□ -0.63
MYCN-202ENST00000638417 RBMY1A1P0DJD3 496 aaKnown RBP11.14□□□□□ -0.63
MYCN-202ENST00000638417 RBMY1CP0DJD4 496 aa11.14□□□□□ -0.63
MYCN-202ENST00000638417 SSTP61278 116 aa11.14□□□□□ -0.63
MYCN-202ENST00000638417 RBMY1FQ15415 496 aaKnown RBP11.14□□□□□ -0.63
MYCN-202ENST00000638417 Q8N1Y9 231 aa11.14□□□□□ -0.63
MYCN-202ENST00000638417 SRD5A3Q9H8P0 318 aa11.14□□□□□ -0.63
MYCN-202ENST00000638417 AMBPP02760 352 aa11.13□□□□□ -0.63
MYCN-202ENST00000638417 FRMD6-AS1P0C7T7 363 aa11.13□□□□□ -0.63
MYCN-202ENST00000638417 RPS10P46783 165 aaKnown RBP11.13□□□□□ -0.63
MYCN-202ENST00000638417 FOXA3P55318 350 aaPredicted RBP11.13□□□□□ -0.63
MYCN-202ENST00000638417 LYZL1Q6UWQ5 148 aa11.13□□□□□ -0.63
MYCN-202ENST00000638417 FER1L6-AS1Q8NA97 138 aa11.13□□□□□ -0.63
MYCN-202ENST00000638417 MUC21A0A0G2JKD1 596 aa11.12□□□□□ -0.63
MYCN-202ENST00000638417 MUC21A0A140T8X8 626 aa11.12□□□□□ -0.63
MYCN-202ENST00000638417 INSP01308 110 aa11.12□□□□□ -0.63
MYCN-202ENST00000638417 WWC2-AS2Q96NR7 200 aa11.12□□□□□ -0.63
MYCN-202ENST00000638417 TIMM8BQ9Y5J9 83 aaPredicted RBP11.12□□□□□ -0.63
MYCN-202ENST00000638417 IGHV1OR15-1A0A075B7D0 117 aa11.11□□□□□ -0.63
MYCN-202ENST00000638417 HTN1P15515 57 aa11.11□□□□□ -0.63
MYCN-202ENST00000638417 KCNS1Q96KK3 526 aa11.11□□□□□ -0.63
MYCN-202ENST00000638417 TP53TG3Q9ULZ0 132 aa11.11□□□□□ -0.63
MYCN-202ENST00000638417 U3KQK5 164 aa11.11□□□□□ -0.63
MYCN-202ENST00000638417 TYMSP04818 313 aa11.11□□□□□ -0.63
MYCN-202ENST00000638417 IGLC6P0CF74 106 aa11.11□□□□□ -0.63
MYCN-202ENST00000638417 NHLRC4P0CG21 123 aaPredicted RBP11.11□□□□□ -0.63
MYCN-202ENST00000638417 S100A4P26447 101 aaKnown RBP11.11□□□□□ -0.63
MYCN-202ENST00000638417 ASIPP42127 132 aa11.11□□□□□ -0.63
MYCN-202ENST00000638417 LINC01587Q99440 93 aa11.11□□□□□ -0.63
MYCN-202ENST00000638417 IGHV3OR16-12A0A075B7B8 117 aa11.1□□□□□ -0.63
MYCN-202ENST00000638417 A0A1B0GUT8 65 aa11.1□□□□□ -0.63
MYCN-202ENST00000638417 H3BVH4 76 aa11.1□□□□□ -0.63
MYCN-202ENST00000638417 GIG44P09565 113 aaPredicted RBP11.1□□□□□ -0.63
MYCN-202ENST00000638417 ARMS2P0C7Q2 107 aa11.1□□□□□ -0.63
MYCN-202ENST00000638417 CAMPP49913 170 aa11.1□□□□□ -0.63
MYCN-202ENST00000638417 MORN3Q6PF18 240 aaPredicted RBP11.1□□□□□ -0.63
MYCN-202ENST00000638417 BORCS7Q96B45 105 aa11.1□□□□□ -0.63
MYCN-202ENST00000638417 TMEM208Q9BTX3 173 aa11.1□□□□□ -0.63
MYCN-202ENST00000638417 KMT2CQ8NEZ4 4911 aaKnown RBP11.09□□□□□ -0.63
MYCN-202ENST00000638417 CBY3A6NI87 242 aa11.09□□□□□ -0.63
MYCN-202ENST00000638417 RAB4BP61018 213 aa11.09□□□□□ -0.63
MYCN-202ENST00000638417 TDRG1Q3Y452 100 aa11.09□□□□□ -0.63
MYCN-202ENST00000638417 F2Z2F3 143 aa11.08□□□□□ -0.64
MYCN-202ENST00000638417 SPRY2O43597 315 aa11.08□□□□□ -0.64
MYCN-202ENST00000638417 PRM2P04554 102 aa11.08□□□□□ -0.64
MYCN-202ENST00000638417 RIGQ13278 110 aa11.08□□□□□ -0.64
MYCN-202ENST00000638417 C1orf158Q8N1D5 194 aa11.08□□□□□ -0.64
MYCN-202ENST00000638417 C20orf144Q9BQM9 153 aa11.08□□□□□ -0.64
MYCN-202ENST00000638417 C1QTNF4Q9BXJ3 329 aa11.08□□□□□ -0.64
MYCN-202ENST00000638417 CSTL1Q9H114 145 aa11.08□□□□□ -0.64
MYCN-202ENST00000638417 LOC102724200A0A096LPH7 203 aaPredicted RBP11.08□□□□□ -0.64
MYCN-202ENST00000638417 CTRLP40313 264 aa11.08□□□□□ -0.64
MYCN-202ENST00000638417 HBBP68871 147 aa11.08□□□□□ -0.64
MYCN-202ENST00000638417 ATP5L2Q7Z4Y8 100 aa11.08□□□□□ -0.64
MYCN-202ENST00000638417 SBSPONQ8IVN8 264 aa11.08□□□□□ -0.64
MYCN-202ENST00000638417 TMA7Q9Y2S6 64 aaKnown RBP11.08□□□□□ -0.64
MYCN-202ENST00000638417 TENM3Q9P273 2699 aa11.07□□□□□ -0.64
MYCN-202ENST00000638417 SNURFLB1AK76 121 aa11.07□□□□□ -0.64
MYCN-202ENST00000638417 TRGC2P03986 189 aa11.07□□□□□ -0.64
MYCN-202ENST00000638417 NTF3P20783 257 aa11.07□□□□□ -0.64
MYCN-202ENST00000638417 TWIST1Q15672 202 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms