RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-223ENST00000636058 XCL2Q9UBD3 114 aa7□□□□□ -1.29
CACNA1A-223ENST00000636058 TMSB15BA0A087X1C1 80 aa6.99□□□□□ -1.29
CACNA1A-223ENST00000636058 SMIM27A0A1W2PRY6 76 aa6.99□□□□□ -1.29
CACNA1A-223ENST00000636058 FAM231BA6NCW3 169 aa6.99□□□□□ -1.29
CACNA1A-223ENST00000636058 A8MWL6 223 aa6.99□□□□□ -1.29
CACNA1A-223ENST00000636058 CXCL1P09341 107 aa6.99□□□□□ -1.29
CACNA1A-223ENST00000636058 RPS20P60866 119 aaKnown RBP6.99□□□□□ -1.29
CACNA1A-223ENST00000636058 ANXA2RQ3ZCQ2 193 aa6.99□□□□□ -1.29
CACNA1A-223ENST00000636058 MUC21Q5SSG8 566 aa6.99□□□□□ -1.29
CACNA1A-223ENST00000636058 TMEM88Q6PEY1 159 aa6.99□□□□□ -1.29
CACNA1A-223ENST00000636058 CBLN2Q8IUK8 224 aa6.99□□□□□ -1.29
CACNA1A-223ENST00000636058 CSNK1G2-AS1Q8NCQ2 148 aa6.99□□□□□ -1.29
CACNA1A-223ENST00000636058 LINC00467Q9BRT7 94 aa6.99□□□□□ -1.29
CACNA1A-223ENST00000636058 GFRA4Q9GZZ7 299 aa6.99□□□□□ -1.29
CACNA1A-223ENST00000636058 TUBA4BQ9H853 241 aa6.99□□□□□ -1.29
CACNA1A-223ENST00000636058 SMCO4Q9NRQ5 59 aa6.99□□□□□ -1.29
CACNA1A-223ENST00000636058 NAGKQ9UJ70 344 aa6.99□□□□□ -1.29
CACNA1A-223ENST00000636058 DNHD1Q96M86 4753 aa6.99□□□□□ -1.29
CACNA1A-223ENST00000636058 IGHV1OR15-1A0A075B7D0 117 aa6.98□□□□□ -1.29
CACNA1A-223ENST00000636058 XKRY2A2RUG3 117 aa6.98□□□□□ -1.29
CACNA1A-223ENST00000636058 GZMBP10144 247 aa6.98□□□□□ -1.29
CACNA1A-223ENST00000636058 APOC4P55056 127 aa6.98□□□□□ -1.29
CACNA1A-223ENST00000636058 FOXA3P55318 350 aaPredicted RBP6.98□□□□□ -1.29
CACNA1A-223ENST00000636058 FAM159AQ6UWV7 190 aa6.98□□□□□ -1.29
CACNA1A-223ENST00000636058 C1orf158Q8N1D5 194 aa6.98□□□□□ -1.29
CACNA1A-223ENST00000636058 TMEM256Q8N2U0 113 aa6.98□□□□□ -1.29
CACNA1A-223ENST00000636058 GTSF1Q8WW33 167 aa6.98□□□□□ -1.29
CACNA1A-223ENST00000636058 KCNS1Q96KK3 526 aa6.98□□□□□ -1.29
CACNA1A-223ENST00000636058 YPEL4Q96NS1 127 aa6.98□□□□□ -1.29
CACNA1A-223ENST00000636058 NEU1Q99519 415 aa6.98□□□□□ -1.29
CACNA1A-223ENST00000636058 PYGO2Q9BRQ0 406 aa6.98□□□□□ -1.29
CACNA1A-223ENST00000636058 LOC105371267A0A1B0GV96 52 aa6.97□□□□□ -1.29
CACNA1A-223ENST00000636058 GRIFINA4D1Z8 144 aa6.97□□□□□ -1.29
CACNA1A-223ENST00000636058 HIGD1CA8MV81 97 aa6.97□□□□□ -1.29
CACNA1A-223ENST00000636058 TYMSP04818 313 aa6.97□□□□□ -1.29
CACNA1A-223ENST00000636058 IGLC6P0CF74 106 aa6.97□□□□□ -1.29
CACNA1A-223ENST00000636058 S100PP25815 95 aa6.97□□□□□ -1.29
CACNA1A-223ENST00000636058 TCL1AP56279 114 aa6.97□□□□□ -1.29
CACNA1A-223ENST00000636058 FAM3BP58499 235 aaPredicted RBP6.97□□□□□ -1.29
CACNA1A-223ENST00000636058 ELOBQ15370 118 aa6.97□□□□□ -1.29
CACNA1A-223ENST00000636058 DNLZQ5SXM8 178 aa6.97□□□□□ -1.29
CACNA1A-223ENST00000636058 KCNIP4Q6PIL6 250 aa6.97□□□□□ -1.29
CACNA1A-223ENST00000636058 ZNF705AQ6ZN79 300 aaPredicted RBP6.97□□□□□ -1.29
CACNA1A-223ENST00000636058 NAT8BQ9UHF3 227 aa6.97□□□□□ -1.29
CACNA1A-223ENST00000636058 URGCP-MRPS24S4R325 110 aa6.97□□□□□ -1.29
CACNA1A-223ENST00000636058 TRAV9-1A0A075B6T8 112 aa6.96□□□□□ -1.3
CACNA1A-223ENST00000636058 A0A1W2PPQ1 181 aa6.96□□□□□ -1.3
CACNA1A-223ENST00000636058 GNRH2O43555 120 aa6.96□□□□□ -1.3
CACNA1A-223ENST00000636058 ASIPP42127 132 aa6.96□□□□□ -1.3
CACNA1A-223ENST00000636058 NUP35Q8NFH5 326 aa6.96□□□□□ -1.3
CACNA1A-223ENST00000636058 LINC01587Q99440 93 aa6.96□□□□□ -1.3
CACNA1A-223ENST00000636058 TP53TG3Q9ULZ0 132 aa6.96□□□□□ -1.3
CACNA1A-223ENST00000636058 GOLT1BQ9Y3E0 138 aa6.96□□□□□ -1.3
CACNA1A-223ENST00000636058 DNAH3Q8TD57 4116 aa6.96□□□□□ -1.3
CACNA1A-223ENST00000636058 TRGV11A0A075B6L2 103 aa6.95□□□□□ -1.3
CACNA1A-223ENST00000636058 IGHV3-16A0A0C4DH30 117 aa6.95□□□□□ -1.3
CACNA1A-223ENST00000636058 CBY3A6NI87 242 aa6.95□□□□□ -1.3
CACNA1A-223ENST00000636058 K7EIL1 84 aa6.95□□□□□ -1.3
CACNA1A-223ENST00000636058 UBE2CO00762 179 aa6.95□□□□□ -1.3
CACNA1A-223ENST00000636058 SNAI2O43623 268 aa6.95□□□□□ -1.3
CACNA1A-223ENST00000636058 PRB2P02812 416 aaPredicted RBP6.95□□□□□ -1.3
CACNA1A-223ENST00000636058 OR5AL1P0C617 328 aa6.95□□□□□ -1.3
CACNA1A-223ENST00000636058 FRMD6-AS1P0C7T7 363 aa6.95□□□□□ -1.3
CACNA1A-223ENST00000636058 MED14OSP0DP75 135 aa6.95□□□□□ -1.3
CACNA1A-223ENST00000636058 RNASE3P12724 160 aaKnown RBP6.95□□□□□ -1.3
CACNA1A-223ENST00000636058 CTRLP40313 264 aa6.95□□□□□ -1.3
CACNA1A-223ENST00000636058 FER1L6-AS1Q8NA97 138 aa6.95□□□□□ -1.3
CACNA1A-223ENST00000636058 BTF3L4Q96K17 158 aa6.95□□□□□ -1.3
CACNA1A-223ENST00000636058 PGLYRP4Q96LB8 373 aa6.95□□□□□ -1.3
CACNA1A-223ENST00000636058 TMEM208Q9BTX3 173 aa6.95□□□□□ -1.3
CACNA1A-223ENST00000636058 SSBP4Q9BWG4 385 aaPredicted RBP6.95□□□□□ -1.3
CACNA1A-223ENST00000636058 SCRT2Q9NQ03 307 aa6.95□□□□□ -1.3
CACNA1A-223ENST00000636058 MGAM2Q2M2H8 2515 aa6.94□□□□□ -1.3
CACNA1A-223ENST00000636058 TRBV24-1A0A075B6N3 115 aa6.94□□□□□ -1.3
CACNA1A-223ENST00000636058 IGHV3OR16-12A0A075B7B8 117 aa6.94□□□□□ -1.3
CACNA1A-223ENST00000636058 TGIF2-C20orf24A0A0A6YYL0 155 aa6.94□□□□□ -1.3
CACNA1A-223ENST00000636058 COLCA2A8K830 154 aa6.94□□□□□ -1.3
CACNA1A-223ENST00000636058 F2Z2F3 143 aa6.94□□□□□ -1.3
CACNA1A-223ENST00000636058 H3BVH4 76 aa6.94□□□□□ -1.3
CACNA1A-223ENST00000636058 PRM2P04554 102 aa6.94□□□□□ -1.3
CACNA1A-223ENST00000636058 ARMS2P0C7Q2 107 aa6.94□□□□□ -1.3
CACNA1A-223ENST00000636058 HTN1P15515 57 aa6.94□□□□□ -1.3
CACNA1A-223ENST00000636058 S100A4P26447 101 aaKnown RBP6.94□□□□□ -1.3
CACNA1A-223ENST00000636058 LYZL1Q6UWQ5 148 aa6.94□□□□□ -1.3
CACNA1A-223ENST00000636058 Q6ZWC4 215 aa6.94□□□□□ -1.3
CACNA1A-223ENST00000636058 C11orf72Q8NBR9 251 aa6.94□□□□□ -1.3
CACNA1A-223ENST00000636058 C9orf85Q96MD7 179 aa6.94□□□□□ -1.3
CACNA1A-223ENST00000636058 TPPP3Q9BW30 176 aa6.94□□□□□ -1.3
CACNA1A-223ENST00000636058 CNFNQ9BYD5 112 aa6.94□□□□□ -1.3
CACNA1A-223ENST00000636058 MDFICQ9P1T7 246 aa6.94□□□□□ -1.3
CACNA1A-223ENST00000636058 AZU1P20160 251 aa6.93□□□□□ -1.3
CACNA1A-223ENST00000636058 DEFB135Q30KP9 77 aa6.93□□□□□ -1.3
CACNA1A-223ENST00000636058 ATP5L2Q7Z4Y8 100 aa6.93□□□□□ -1.3
CACNA1A-223ENST00000636058 RNASE8Q8TDE3 154 aaKnown RBP6.93□□□□□ -1.3
CACNA1A-223ENST00000636058 TMEM263Q8WUH6 116 aaKnown RBP6.93□□□□□ -1.3
CACNA1A-223ENST00000636058 X6R8D5 127 aa6.93□□□□□ -1.3
CACNA1A-223ENST00000636058 NOTCH1P46531 2555 aa6.92□□□□□ -1.3
CACNA1A-223ENST00000636058 NBEAL1Q6ZS30 2694 aa6.92□□□□□ -1.3
CACNA1A-223ENST00000636058 IGHV4-4A0A075B6R2 117 aa6.92□□□□□ -1.3
CACNA1A-223ENST00000636058 A0A1B0GUT8 65 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms