RNA–Protein interactions for RNA: ENST00000631321.1

LINC00540-203, long intergenic non-protein coding RNA 540, humanhuman

TSL 2 BASIC

Gene LINC00540, Length 2,412 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00540-203ENST00000631321 OR10J6PQ8NGY7 276 aa9.69□□□□□ -0.86
LINC00540-203ENST00000631321 MED14OSP0DP75 135 aa9.68□□□□□ -0.86
LINC00540-203ENST00000631321 SRSF1Q07955 248 aaKnown RBP eCLIP9.68□□□□□ -0.86
LINC00540-203ENST00000631321 UFSP1Q6NVU6 142 aa9.68□□□□□ -0.86
LINC00540-203ENST00000631321 C10orf105Q8TEF2 133 aa9.68□□□□□ -0.86
LINC00540-203ENST00000631321 TRBV7-9A0A0J9YWB2 115 aa9.68□□□□□ -0.86
LINC00540-203ENST00000631321 MYOZ3Q8TDC0 251 aa9.68□□□□□ -0.86
LINC00540-203ENST00000631321 CST9LQ9H4G1 147 aa9.68□□□□□ -0.86
LINC00540-203ENST00000631321 TMEM8BA6NDV4 472 aa9.67□□□□□ -0.86
LINC00540-203ENST00000631321 SMIM2Q9BVW6 85 aa9.67□□□□□ -0.86
LINC00540-203ENST00000631321 ABCA2Q9BZC7 2435 aa9.67□□□□□ -0.86
LINC00540-203ENST00000631321 NDUFS8O00217 210 aa9.67□□□□□ -0.86
LINC00540-203ENST00000631321 IGHV4-38-2P0DP08 117 aa9.67□□□□□ -0.86
LINC00540-203ENST00000631321 JMJD8Q96S16 334 aa9.67□□□□□ -0.86
LINC00540-203ENST00000631321 A0A087WX48 190 aa9.66□□□□□ -0.86
LINC00540-203ENST00000631321 C20orf78Q9BR46 151 aa9.66□□□□□ -0.86
LINC00540-203ENST00000631321 GAGE10A6NGK3 116 aa9.66□□□□□ -0.86
LINC00540-203ENST00000631321 ASIPP42127 132 aa9.66□□□□□ -0.86
LINC00540-203ENST00000631321 ZC2HC1BQ5TFG8 222 aa9.66□□□□□ -0.86
LINC00540-203ENST00000631321 MRPL35Q9NZE8 188 aaKnown RBP9.66□□□□□ -0.86
LINC00540-203ENST00000631321 TRAV12-1A0A0B4J245 112 aa9.65□□□□□ -0.86
LINC00540-203ENST00000631321 GAGE12BA1L429 117 aa9.65□□□□□ -0.86
LINC00540-203ENST00000631321 K7EMI3 77 aa9.65□□□□□ -0.86
LINC00540-203ENST00000631321 IGLV1-40P01703 118 aa9.65□□□□□ -0.86
LINC00540-203ENST00000631321 AKAP6Q13023 2319 aa9.65□□□□□ -0.86
LINC00540-203ENST00000631321 OCIAD2Q56VL3 154 aa9.65□□□□□ -0.86
LINC00540-203ENST00000631321 GTF2H5Q6ZYL4 71 aa9.65□□□□□ -0.86
LINC00540-203ENST00000631321 RASL10AQ92737 203 aa9.65□□□□□ -0.86
LINC00540-203ENST00000631321 AP1S3Q96PC3 154 aa9.65□□□□□ -0.86
LINC00540-203ENST00000631321 KLK15Q9H2R5 256 aa9.65□□□□□ -0.86
LINC00540-203ENST00000631321 A0A0G2JLM5 398 aa9.65□□□□□ -0.86
LINC00540-203ENST00000631321 H3BUX3 64 aa9.65□□□□□ -0.86
LINC00540-203ENST00000631321 K7EP34 96 aa9.65□□□□□ -0.86
LINC00540-203ENST00000631321 SLC25A16P16260 332 aa9.65□□□□□ -0.86
LINC00540-203ENST00000631321 LY6EQ16553 131 aa9.65□□□□□ -0.86
LINC00540-203ENST00000631321 GTSCR1Q86UQ5 136 aa9.65□□□□□ -0.86
LINC00540-203ENST00000631321 DPH3P1Q9H4G8 78 aa9.65□□□□□ -0.86
LINC00540-203ENST00000631321 H3BUT2 72 aa9.64□□□□□ -0.87
LINC00540-203ENST00000631321 M0R381 172 aa9.64□□□□□ -0.87
LINC00540-203ENST00000631321 ANXA2RQ3ZCQ2 193 aa9.64□□□□□ -0.87
LINC00540-203ENST00000631321 ORMDL2Q53FV1 153 aa9.64□□□□□ -0.87
LINC00540-203ENST00000631321 CCL19Q99731 98 aa9.64□□□□□ -0.87
LINC00540-203ENST00000631321 CHAC1Q9BUX1 264 aa9.64□□□□□ -0.87
LINC00540-203ENST00000631321 TRBV25-1A0A075B6N4 114 aa9.64□□□□□ -0.87
LINC00540-203ENST00000631321 NXPH4O95158 308 aa9.64□□□□□ -0.87
LINC00540-203ENST00000631321 IGHV3-11P01762 117 aa9.64□□□□□ -0.87
LINC00540-203ENST00000631321 PLNP26678 52 aa9.64□□□□□ -0.87
LINC00540-203ENST00000631321 SUMO2P61956 95 aaKnown RBP9.64□□□□□ -0.87
LINC00540-203ENST00000631321 CFHR3Q02985 330 aa9.64□□□□□ -0.87
LINC00540-203ENST00000631321 POM121L12Q8N7R1 296 aa9.64□□□□□ -0.87
LINC00540-203ENST00000631321 TTTY13Q9BZ97 58 aa9.64□□□□□ -0.87
LINC00540-203ENST00000631321 TMEM160Q9NX00 188 aa9.64□□□□□ -0.87
LINC00540-203ENST00000631321 SPTBN4Q9H254 2564 aa9.63□□□□□ -0.87
LINC00540-203ENST00000631321 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.63□□□□□ -0.87
LINC00540-203ENST00000631321 J3KRW8 73 aa9.63□□□□□ -0.87
LINC00540-203ENST00000631321 PF4V1P10720 104 aa9.63□□□□□ -0.87
LINC00540-203ENST00000631321 S100A4P26447 101 aaKnown RBP9.63□□□□□ -0.87
LINC00540-203ENST00000631321 CLEC2AQ6UVW9 174 aa9.63□□□□□ -0.87
LINC00540-203ENST00000631321 TOMM6Q96B49 74 aa9.63□□□□□ -0.87
LINC00540-203ENST00000631321 RHPN1-AS1Q9BWJ2 59 aa9.63□□□□□ -0.87
LINC00540-203ENST00000631321 ZNF580Q9UK33 172 aa9.63□□□□□ -0.87
LINC00540-203ENST00000631321 RNF223E7ERA6 249 aa9.63□□□□□ -0.87
LINC00540-203ENST00000631321 DEFB1P60022 68 aa9.63□□□□□ -0.87
LINC00540-203ENST00000631321 BLCAPP62952 87 aa9.63□□□□□ -0.87
LINC00540-203ENST00000631321 TM2D2Q9BX73 214 aa9.63□□□□□ -0.87
LINC00540-203ENST00000631321 PHLDA3Q9Y5J5 127 aa9.63□□□□□ -0.87
LINC00540-203ENST00000631321 A0A1W2PPM0 123 aa9.62□□□□□ -0.87
LINC00540-203ENST00000631321 H7C1H1 209 aa9.62□□□□□ -0.87
LINC00540-203ENST00000631321 RNASE3P12724 160 aaKnown RBP9.62□□□□□ -0.87
LINC00540-203ENST00000631321 RNASE4P34096 147 aaKnown RBP9.62□□□□□ -0.87
LINC00540-203ENST00000631321 FXYD2P54710 66 aa9.62□□□□□ -0.87
LINC00540-203ENST00000631321 DAZ1Q9NQZ3 744 aaKnown RBP9.62□□□□□ -0.87
LINC00540-203ENST00000631321 NCOR2Q9Y618 2525 aa9.62□□□□□ -0.87
LINC00540-203ENST00000631321 ITPR1Q14643 2758 aa9.62□□□□□ -0.87
LINC00540-203ENST00000631321 CHD8Q9HCK8 2581 aa9.62□□□□□ -0.87
LINC00540-203ENST00000631321 IGHV4-30-2A0A087WSY4 118 aa9.62□□□□□ -0.87
LINC00540-203ENST00000631321 K7EMT4 169 aa9.62□□□□□ -0.87
LINC00540-203ENST00000631321 MSMBP08118 114 aa9.62□□□□□ -0.87
LINC00540-203ENST00000631321 SMIM13P0DJ93 91 aa9.62□□□□□ -0.87
LINC00540-203ENST00000631321 PCP4P48539 62 aa9.62□□□□□ -0.87
LINC00540-203ENST00000631321 Q6ZS46 218 aa9.62□□□□□ -0.87
LINC00540-203ENST00000631321 F6UB75 175 aa9.61□□□□□ -0.87
LINC00540-203ENST00000631321 F8VRH5 84 aa9.61□□□□□ -0.87
LINC00540-203ENST00000631321 GCSHP23434 173 aa9.61□□□□□ -0.87
LINC00540-203ENST00000631321 TM4SF20Q53R12 229 aa9.61□□□□□ -0.87
LINC00540-203ENST00000631321 C14orf178Q8N769 122 aaPredicted RBP9.61□□□□□ -0.87
LINC00540-203ENST00000631321 SPOCK3Q9BQ16 436 aa9.61□□□□□ -0.87
LINC00540-203ENST00000631321 KLLNB2CW77 178 aa9.61□□□□□ -0.87
LINC00540-203ENST00000631321 PPP1R17O96001 155 aa9.61□□□□□ -0.87
LINC00540-203ENST00000631321 RPL11P62913 178 aaKnown RBP9.61□□□□□ -0.87
LINC00540-203ENST00000631321 TAL2Q16559 108 aa9.61□□□□□ -0.87
LINC00540-203ENST00000631321 SAMD13Q5VXD3 122 aa9.61□□□□□ -0.87
LINC00540-203ENST00000631321 GNRH2O43555 120 aa9.6□□□□□ -0.87
LINC00540-203ENST00000631321 SPRY2O43597 315 aa9.6□□□□□ -0.87
LINC00540-203ENST00000631321 ATP5J2P56134 94 aa9.6□□□□□ -0.87
LINC00540-203ENST00000631321 CEND1Q8N111 149 aa9.6□□□□□ -0.87
LINC00540-203ENST00000631321 MAPKAPK5-AS1Q8N8E1 139 aa9.6□□□□□ -0.87
LINC00540-203ENST00000631321 NEXN-AS1Q8NBZ9 246 aa9.6□□□□□ -0.87
LINC00540-203ENST00000631321 OR5A1Q8NGJ0 315 aa9.6□□□□□ -0.87
LINC00540-203ENST00000631321 PHLDA1Q8WV24 401 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms