RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 IGHV3OR15-7A0A075B7D8 119 aa3.64□□□□□ -1.83
LINC01109-201ENST00000603837 LY6LH3BQJ8 138 aa3.64□□□□□ -1.83
LINC01109-201ENST00000603837 MYCNOSP40205 109 aa3.64□□□□□ -1.83
LINC01109-201ENST00000603837 IFI27P40305 119 aaPredicted RBP3.64□□□□□ -1.83
LINC01109-201ENST00000603837 LPAL2Q16609 132 aa3.64□□□□□ -1.83
LINC01109-201ENST00000603837 MIR17HGQ75NE6 70 aa3.64□□□□□ -1.83
LINC01109-201ENST00000603837 MAPKAPK5-AS1Q8N8E1 139 aa3.64□□□□□ -1.83
LINC01109-201ENST00000603837 RITA1Q96K30 269 aa3.64□□□□□ -1.83
LINC01109-201ENST00000603837 C17orf77Q96MU5 243 aa3.64□□□□□ -1.83
LINC01109-201ENST00000603837 IMUPQ9GZP8 106 aa3.64□□□□□ -1.83
LINC01109-201ENST00000603837 ADAMTS9Q9P2N4 1935 aa3.64□□□□□ -1.83
LINC01109-201ENST00000603837 MGAQ8IWI9 3026 aa3.64□□□□□ -1.83
LINC01109-201ENST00000603837 DCHS1Q96JQ0 3298 aa3.64□□□□□ -1.83
LINC01109-201ENST00000603837 LOC389332A0A1B0GUA5 103 aa3.64□□□□□ -1.83
LINC01109-201ENST00000603837 LINC01619G3V211 115 aa3.64□□□□□ -1.83
LINC01109-201ENST00000603837 H3BMM0 161 aa3.64□□□□□ -1.83
LINC01109-201ENST00000603837 LGALS9O00182 355 aa3.64□□□□□ -1.83
LINC01109-201ENST00000603837 HERVK_113P61574 105 aa3.64□□□□□ -1.83
LINC01109-201ENST00000603837 RPS21P63220 83 aaKnown RBP3.64□□□□□ -1.83
LINC01109-201ENST00000603837 PLGLB1Q02325 96 aa3.64□□□□□ -1.83
LINC01109-201ENST00000603837 EBI3Q14213 229 aa3.64□□□□□ -1.83
LINC01109-201ENST00000603837 DEFB134Q4QY38 66 aa3.64□□□□□ -1.83
LINC01109-201ENST00000603837 SPINK9Q5DT21 86 aa3.64□□□□□ -1.83
LINC01109-201ENST00000603837 RPS19BP1Q86WX3 136 aaKnown RBP3.64□□□□□ -1.83
LINC01109-201ENST00000603837 ZNF491Q8N8L2 437 aa3.64□□□□□ -1.83
LINC01109-201ENST00000603837 UBE2WQ96B02 151 aa3.64□□□□□ -1.83
LINC01109-201ENST00000603837 LYZL4Q96KX0 146 aa3.64□□□□□ -1.83
LINC01109-201ENST00000603837 NXT2Q9NPJ8 142 aaKnown RBP3.64□□□□□ -1.83
LINC01109-201ENST00000603837 NCOR2Q9Y618 2525 aa3.64□□□□□ -1.83
LINC01109-201ENST00000603837 C19orf71A6NCJ1 209 aa3.64□□□□□ -1.83
LINC01109-201ENST00000603837 FOXS1O43638 330 aa3.64□□□□□ -1.83
LINC01109-201ENST00000603837 WT1P19544 449 aaPredicted RBP3.64□□□□□ -1.83
LINC01109-201ENST00000603837 FXYD7P58549 80 aa3.64□□□□□ -1.83
LINC01109-201ENST00000603837 RPL18AQ02543 176 aaKnown RBP3.64□□□□□ -1.83
LINC01109-201ENST00000603837 AAED1Q7RTV5 226 aa3.64□□□□□ -1.83
LINC01109-201ENST00000603837 SVILO95425 2214 aa3.64□□□□□ -1.83
LINC01109-201ENST00000603837 PCNX2A6NKB5 2137 aa3.63□□□□□ -1.83
LINC01109-201ENST00000603837 PIEZO1Q92508 2521 aa3.63□□□□□ -1.83
LINC01109-201ENST00000603837 IGKV1-6A0A0C4DH72 117 aa3.63□□□□□ -1.83
LINC01109-201ENST00000603837 WI2-2373I1.2A0A1W2PRP0 233 aa3.63□□□□□ -1.83
LINC01109-201ENST00000603837 COL8A2P25067 703 aa3.63□□□□□ -1.83
LINC01109-201ENST00000603837 TWIST1Q15672 202 aa3.63□□□□□ -1.83
LINC01109-201ENST00000603837 KRTAP27-1Q3LI81 207 aa3.63□□□□□ -1.83
LINC01109-201ENST00000603837 C11orf53Q8IXP5 236 aa3.63□□□□□ -1.83
LINC01109-201ENST00000603837 DCANP1Q8TF63 244 aa3.63□□□□□ -1.83
LINC01109-201ENST00000603837 ZNF524Q96C55 264 aa3.63□□□□□ -1.83
LINC01109-201ENST00000603837 ZNF799Q96GE5 643 aa3.63□□□□□ -1.83
LINC01109-201ENST00000603837 MED12Q93074 2177 aa3.63□□□□□ -1.83
LINC01109-201ENST00000603837 TEX49A0A1B0GTD5 131 aa3.63□□□□□ -1.83
LINC01109-201ENST00000603837 PEX7O00628 323 aa3.63□□□□□ -1.83
LINC01109-201ENST00000603837 MRPS12O15235 138 aaKnown RBP3.63□□□□□ -1.83
LINC01109-201ENST00000603837 COX6A1P12074 109 aa3.63□□□□□ -1.83
LINC01109-201ENST00000603837 UBE2D1P51668 147 aa3.63□□□□□ -1.83
LINC01109-201ENST00000603837 MDP1Q86V88 176 aa3.63□□□□□ -1.83
LINC01109-201ENST00000603837 PRIMA1Q86XR5 153 aa3.63□□□□□ -1.83
LINC01109-201ENST00000603837 DRAM1Q8N682 238 aa3.63□□□□□ -1.83
LINC01109-201ENST00000603837 RTL8AQ9BWD3 113 aa3.63□□□□□ -1.83
LINC01109-201ENST00000603837 MRPL20Q9BYC9 149 aaKnown RBP3.63□□□□□ -1.83
LINC01109-201ENST00000603837 CACNA1DQ01668 2161 aa3.63□□□□□ -1.83
LINC01109-201ENST00000603837 TRAV17A0A0B4J275 112 aa3.62□□□□□ -1.83
LINC01109-201ENST00000603837 IGKV1-12A0A0C4DH73 117 aa3.62□□□□□ -1.83
LINC01109-201ENST00000603837 IGKV1D-12P01611 117 aa3.62□□□□□ -1.83
LINC01109-201ENST00000603837 PRSS1P07477 247 aa3.62□□□□□ -1.83
LINC01109-201ENST00000603837 HLA-DMBP28068 263 aa3.62□□□□□ -1.83
LINC01109-201ENST00000603837 MRPS21P82921 87 aaKnown RBP3.62□□□□□ -1.83
LINC01109-201ENST00000603837 KRTAP1-3Q8IUG1 177 aa3.62□□□□□ -1.83
LINC01109-201ENST00000603837 MYOZ3Q8TDC0 251 aa3.62□□□□□ -1.83
LINC01109-201ENST00000603837 METTL26Q96S19 204 aa3.62□□□□□ -1.83
LINC01109-201ENST00000603837 DCTN5Q9BTE1 182 aa3.62□□□□□ -1.83
LINC01109-201ENST00000603837 AGPAT4-IT1Q9H0P7 198 aa3.62□□□□□ -1.83
LINC01109-201ENST00000603837 DMXL2Q8TDJ6 3036 aa3.62□□□□□ -1.83
LINC01109-201ENST00000603837 IGKV1-27A0A075B6S5 117 aa3.62□□□□□ -1.83
LINC01109-201ENST00000603837 LYRM9A8MSI8 78 aa3.62□□□□□ -1.83
LINC01109-201ENST00000603837 C10orf142B7Z368 130 aa3.62□□□□□ -1.83
LINC01109-201ENST00000603837 IGHV4-34P06331 123 aa3.62□□□□□ -1.83
LINC01109-201ENST00000603837 GP1BBP13224 206 aa3.62□□□□□ -1.83
LINC01109-201ENST00000603837 CA6P23280 308 aa3.62□□□□□ -1.83
LINC01109-201ENST00000603837 NSUN5P1Q3KNT7 163 aa3.62□□□□□ -1.83
LINC01109-201ENST00000603837 FAM222AQ5U5X8 452 aa3.62□□□□□ -1.83
LINC01109-201ENST00000603837 RUSC1-AS1Q66K80 236 aa3.62□□□□□ -1.83
LINC01109-201ENST00000603837 VN1R4Q7Z5H5 301 aa3.62□□□□□ -1.83
LINC01109-201ENST00000603837 SHANK2-AS3Q9BTD1 123 aa3.62□□□□□ -1.83
LINC01109-201ENST00000603837 GFRA4Q9GZZ7 299 aa3.62□□□□□ -1.83
LINC01109-201ENST00000603837 ZFHX4Q86UP3 3567 aa3.62□□□□□ -1.83
LINC01109-201ENST00000603837 IGF2RP11717 2491 aa3.62□□□□□ -1.83
LINC01109-201ENST00000603837 TRAV41A0A0B4J266 112 aa3.62□□□□□ -1.83
LINC01109-201ENST00000603837 PGPA6NDG6 321 aa3.62□□□□□ -1.83
LINC01109-201ENST00000603837 INS-IGF2F8WCM5 200 aa3.62□□□□□ -1.83
LINC01109-201ENST00000603837 IGLV3-1P01715 115 aa3.62□□□□□ -1.83
LINC01109-201ENST00000603837 CRIP2P52943 208 aaPredicted RBP3.62□□□□□ -1.83
LINC01109-201ENST00000603837 ERVK-16P61578 105 aa3.62□□□□□ -1.83
LINC01109-201ENST00000603837 RIGQ13278 110 aa3.62□□□□□ -1.83
LINC01109-201ENST00000603837 FLVCR1-AS1Q8TAF5 88 aa3.62□□□□□ -1.83
LINC01109-201ENST00000603837 CYSTM1Q9H1C7 97 aa3.62□□□□□ -1.83
LINC01109-201ENST00000603837 APC2O95996 2303 aa3.61□□□□□ -1.83
LINC01109-201ENST00000603837 ATOX1O00244 68 aa3.61□□□□□ -1.83
LINC01109-201ENST00000603837 ZNF883P0CG24 379 aa3.61□□□□□ -1.83
LINC01109-201ENST00000603837 SUMO2P61956 95 aaKnown RBP3.61□□□□□ -1.83
LINC01109-201ENST00000603837 UBE2L3P68036 154 aaKnown RBP3.61□□□□□ -1.83
LINC01109-201ENST00000603837 SS18Q15532 418 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms