RNA–Protein interactions for RNA: ENST00000602516.1

HCG18-244, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 2,890 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-244ENST00000602516 AMN1Q8IY45 258 aa5.92□□□□□ -1.46
HCG18-244ENST00000602516 Q8N7P7 452 aa5.92□□□□□ -1.46
HCG18-244ENST00000602516 IGF2BP2-AS1Q96M15 143 aa5.92□□□□□ -1.46
HCG18-244ENST00000602516 S1PR3Q99500 378 aa5.92□□□□□ -1.46
HCG18-244ENST00000602516 AP5S1Q9NUS5 200 aa5.92□□□□□ -1.46
HCG18-244ENST00000602516 NHP2Q9NX24 153 aaKnown RBP5.92□□□□□ -1.46
HCG18-244ENST00000602516 ACACBO00763 2458 aa5.91□□□□□ -1.46
HCG18-244ENST00000602516 IGKCP01834 107 aa5.91□□□□□ -1.46
HCG18-244ENST00000602516 SPACA3Q8IXA5 215 aa5.91□□□□□ -1.46
HCG18-244ENST00000602516 NPCDR1Q9BY65 106 aa5.91□□□□□ -1.46
HCG18-244ENST00000602516 AMMECR1Q9Y4X0 333 aaPredicted RBP5.91□□□□□ -1.46
HCG18-244ENST00000602516 FAM240AA0A1B0GVK7 77 aa5.91□□□□□ -1.46
HCG18-244ENST00000602516 PAX4O43316 350 aa5.91□□□□□ -1.46
HCG18-244ENST00000602516 TCRAP04437 139 aa5.91□□□□□ -1.46
HCG18-244ENST00000602516 SAA2P0DJI9 122 aaPredicted RBP5.91□□□□□ -1.46
HCG18-244ENST00000602516 TFF3Q07654 80 aa5.91□□□□□ -1.46
HCG18-244ENST00000602516 SPINK9Q5DT21 86 aa5.91□□□□□ -1.46
HCG18-244ENST00000602516 CCL13Q99616 98 aa5.91□□□□□ -1.46
HCG18-244ENST00000602516 IGF2RP11717 2491 aa5.91□□□□□ -1.46
HCG18-244ENST00000602516 ZGRF1Q86YA3 2104 aa5.9□□□□□ -1.46
HCG18-244ENST00000602516 ATMQ13315 3056 aa5.9□□□□□ -1.46
HCG18-244ENST00000602516 TRAV12-2A0A075B6T6 113 aa5.9□□□□□ -1.46
HCG18-244ENST00000602516 TRAV2A0A0B4J234 112 aa5.9□□□□□ -1.46
HCG18-244ENST00000602516 TRGV8A0A0C4DH27 118 aa5.9□□□□□ -1.46
HCG18-244ENST00000602516 CTXND1A0A1B0GTU2 59 aa5.9□□□□□ -1.46
HCG18-244ENST00000602516 MYCNOSP40205 109 aa5.9□□□□□ -1.46
HCG18-244ENST00000602516 EFNA4P52798 201 aa5.9□□□□□ -1.46
HCG18-244ENST00000602516 BSPH1Q075Z2 132 aa5.9□□□□□ -1.46
HCG18-244ENST00000602516 GFRALQ6UXV0 394 aa5.9□□□□□ -1.46
HCG18-244ENST00000602516 FAM216BQ8N7L0 139 aa5.9□□□□□ -1.46
HCG18-244ENST00000602516 MYOZ3Q8TDC0 251 aa5.9□□□□□ -1.46
HCG18-244ENST00000602516 LEAP2Q969E1 77 aa5.9□□□□□ -1.46
HCG18-244ENST00000602516 WDR83OSQ9Y284 106 aa5.9□□□□□ -1.46
HCG18-244ENST00000602516 TRAV3A0A0B4J244 114 aa5.9□□□□□ -1.47
HCG18-244ENST00000602516 H3BTX0 84 aa5.9□□□□□ -1.47
HCG18-244ENST00000602516 NDUFS7O75251 213 aa5.9□□□□□ -1.47
HCG18-244ENST00000602516 ERVK-16P61578 105 aa5.9□□□□□ -1.47
HCG18-244ENST00000602516 DEFB108BQ8NET1 73 aa5.9□□□□□ -1.47
HCG18-244ENST00000602516 RBM12B-AS1Q9P1G2 102 aa5.9□□□□□ -1.47
HCG18-244ENST00000602516 TPRP12270 2363 aaKnown RBP5.9□□□□□ -1.47
HCG18-244ENST00000602516 PLCE1Q9P212 2302 aa5.9□□□□□ -1.47
HCG18-244ENST00000602516 A8MWV9 139 aa5.89□□□□□ -1.47
HCG18-244ENST00000602516 NPPCP23582 126 aa5.89□□□□□ -1.47
HCG18-244ENST00000602516 CCL8P80075 99 aa5.89□□□□□ -1.47
HCG18-244ENST00000602516 URB1-AS1Q96HZ7 61 aa5.89□□□□□ -1.47
HCG18-244ENST00000602516 TMEM14BQ9NUH8 114 aa5.89□□□□□ -1.47
HCG18-244ENST00000602516 APC2O95996 2303 aa5.89□□□□□ -1.47
HCG18-244ENST00000602516 NBEAQ8NFP9 2946 aa5.89□□□□□ -1.47
HCG18-244ENST00000602516 LINC00527Q9UJ94 153 aa5.89□□□□□ -1.47
HCG18-244ENST00000602516 SMG1Q96Q15 3661 aaKnown RBP5.89□□□□□ -1.47
HCG18-244ENST00000602516 MAP1BP46821 2468 aaKnown RBP5.89□□□□□ -1.47
HCG18-244ENST00000602516 HLA-DQA1P01909 254 aa5.88□□□□□ -1.47
HCG18-244ENST00000602516 FP248Q71RG6 208 aaPredicted RBP5.88□□□□□ -1.47
HCG18-244ENST00000602516 TCRBV4S1A1TA0A5B7 111 aa5.88□□□□□ -1.47
HCG18-244ENST00000602516 LEPROTL1O95214 131 aa5.88□□□□□ -1.47
HCG18-244ENST00000602516 UPK3BQ9BT76 320 aa5.88□□□□□ -1.47
HCG18-244ENST00000602516 SLC25A22Q9H936 323 aa5.88□□□□□ -1.47
HCG18-244ENST00000602516 DMXL2Q8TDJ6 3036 aa5.88□□□□□ -1.47
HCG18-244ENST00000602516 ACACAQ13085 2346 aa5.88□□□□□ -1.47
HCG18-244ENST00000602516 ICE1Q9Y2F5 2266 aa5.88□□□□□ -1.47
HCG18-244ENST00000602516 COL8A2P25067 703 aa5.88□□□□□ -1.47
HCG18-244ENST00000602516 RTL8BQ17RB0 113 aa5.88□□□□□ -1.47
HCG18-244ENST00000602516 ZNF833PQ6ZTB9 187 aa5.88□□□□□ -1.47
HCG18-244ENST00000602516 PRR15Q8IV56 129 aa5.88□□□□□ -1.47
HCG18-244ENST00000602516 RNF182Q8N6D2 247 aa5.88□□□□□ -1.47
HCG18-244ENST00000602516 PLEKHA3Q9HB20 300 aa5.88□□□□□ -1.47
HCG18-244ENST00000602516 LSM4Q9Y4Z0 139 aaKnown RBP5.88□□□□□ -1.47
HCG18-244ENST00000602516 ANKRD11Q6UB99 2663 aaPredicted RBP5.87□□□□□ -1.47
HCG18-244ENST00000602516 USP24Q9UPU5 2620 aa5.87□□□□□ -1.47
HCG18-244ENST00000602516 H3BT86 120 aa5.87□□□□□ -1.47
HCG18-244ENST00000602516 TIMM23O14925 209 aa5.87□□□□□ -1.47
HCG18-244ENST00000602516 SCGB1C2P0DMR2 95 aa5.87□□□□□ -1.47
HCG18-244ENST00000602516 RNASE6Q93091 150 aaKnown RBP5.87□□□□□ -1.47
HCG18-244ENST00000602516 SAP30LQ9HAJ7 183 aa5.87□□□□□ -1.47
HCG18-244ENST00000602516 CCL21O00585 134 aa5.87□□□□□ -1.47
HCG18-244ENST00000602516 SPATA3Q8NHX4 192 aa5.87□□□□□ -1.47
HCG18-244ENST00000602516 MGST2Q99735 147 aa5.87□□□□□ -1.47
HCG18-244ENST00000602516 SMIM26A0A096LP01 95 aa5.86□□□□□ -1.47
HCG18-244ENST00000602516 UPK2O00526 184 aa5.86□□□□□ -1.47
HCG18-244ENST00000602516 OR5AL1P0C617 328 aa5.86□□□□□ -1.47
HCG18-244ENST00000602516 KAAG1Q9UBP8 84 aa5.86□□□□□ -1.47
HCG18-244ENST00000602516 TRAV8-4A0A0B4J246 113 aa5.86□□□□□ -1.47
HCG18-244ENST00000602516 IGHV1-24A0A0C4DH33 117 aa5.86□□□□□ -1.47
HCG18-244ENST00000602516 TEX50A0A1B0GTY4 177 aa5.86□□□□□ -1.47
HCG18-244ENST00000602516 E7EQL1 145 aa5.86□□□□□ -1.47
HCG18-244ENST00000602516 PLAUP00749 431 aa5.86□□□□□ -1.47
HCG18-244ENST00000602516 IGKV1-16P04430 117 aa5.86□□□□□ -1.47
HCG18-244ENST00000602516 LGALS9BQ3B8N2 356 aa5.86□□□□□ -1.47
HCG18-244ENST00000602516 ZNF714Q96N38 554 aa5.86□□□□□ -1.47
HCG18-244ENST00000602516 ZNF256Q9Y2P7 627 aaPredicted RBP5.86□□□□□ -1.47
HCG18-244ENST00000602516 EPG5Q9HCE0 2579 aa5.85□□□□□ -1.47
HCG18-244ENST00000602516 TMSB15BA0A087X1C1 80 aa5.85□□□□□ -1.47
HCG18-244ENST00000602516 DEFA4P12838 97 aa5.85□□□□□ -1.47
HCG18-244ENST00000602516 SAA4P35542 130 aa5.85□□□□□ -1.47
HCG18-244ENST00000602516 PRCDQ00LT1 54 aa5.85□□□□□ -1.47
HCG18-244ENST00000602516 LYPD2Q6UXB3 125 aa5.85□□□□□ -1.47
HCG18-244ENST00000602516 ZNRD1Q9P1U0 126 aa5.85□□□□□ -1.47
HCG18-244ENST00000602516 SERP1Q9Y6X1 66 aa5.85□□□□□ -1.47
HCG18-244ENST00000602516 IZUMO1RA6ND01 250 aa5.85□□□□□ -1.47
HCG18-244ENST00000602516 KNCNA6PVL3 124 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms