RNA–Protein interactions for RNA: ENST00000580958.5

SS18-217, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 775 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-217ENST00000580958 KLLNB2CW77 178 aa7.81□□□□□ -1.16
SS18-217ENST00000580958 MT-ND6P03923 174 aa7.81□□□□□ -1.16
SS18-217ENST00000580958 ARMS2P0C7Q2 107 aa7.81□□□□□ -1.16
SS18-217ENST00000580958 IGLC6P0CF74 106 aa7.81□□□□□ -1.16
SS18-217ENST00000580958 CAMPP49913 170 aa7.81□□□□□ -1.16
SS18-217ENST00000580958 NDUFA6P56556 154 aa7.81□□□□□ -1.16
SS18-217ENST00000580958 SNRPEP62304 92 aaKnown RBP7.81□□□□□ -1.16
SS18-217ENST00000580958 RIGQ13278 110 aa7.81□□□□□ -1.16
SS18-217ENST00000580958 ZNF124Q15973 351 aa7.81□□□□□ -1.16
SS18-217ENST00000580958 Q6AWC8 147 aa7.81□□□□□ -1.16
SS18-217ENST00000580958 RASL11AQ6T310 242 aa7.81□□□□□ -1.16
SS18-217ENST00000580958 LYZL1Q6UWQ5 148 aa7.81□□□□□ -1.16
SS18-217ENST00000580958 ZNF575Q86XF7 245 aa7.81□□□□□ -1.16
SS18-217ENST00000580958 NAGKQ9UJ70 344 aa7.81□□□□□ -1.16
SS18-217ENST00000580958 TENM1Q9UKZ4 2725 aa7.8□□□□□ -1.16
SS18-217ENST00000580958 A0A1B0GUT8 65 aa7.8□□□□□ -1.16
SS18-217ENST00000580958 IGLV1-51P01701 117 aa7.8□□□□□ -1.16
SS18-217ENST00000580958 HLA-DQA1P01909 254 aa7.8□□□□□ -1.16
SS18-217ENST00000580958 HLA-DRB4P13762 266 aa7.8□□□□□ -1.16
SS18-217ENST00000580958 CTRLP40313 264 aa7.8□□□□□ -1.16
SS18-217ENST00000580958 HBBP68871 147 aa7.8□□□□□ -1.16
SS18-217ENST00000580958 PRR31Q5SQ13 230 aa7.8□□□□□ -1.16
SS18-217ENST00000580958 FER1L6-AS1Q8NA97 138 aa7.8□□□□□ -1.16
SS18-217ENST00000580958 BORCS7Q96B45 105 aa7.8□□□□□ -1.16
SS18-217ENST00000580958 CITED1Q99966 193 aa7.8□□□□□ -1.16
SS18-217ENST00000580958 HLA-DRB4X5D2U9 266 aa7.8□□□□□ -1.16
SS18-217ENST00000580958 MUC21A0A0G2JKD1 596 aa7.79□□□□□ -1.16
SS18-217ENST00000580958 MUC21A0A140T8X8 626 aa7.79□□□□□ -1.16
SS18-217ENST00000580958 C7orf71A4D174 169 aa7.79□□□□□ -1.16
SS18-217ENST00000580958 APCSP02743 223 aa7.79□□□□□ -1.16
SS18-217ENST00000580958 TSPOP30536 169 aa7.79□□□□□ -1.16
SS18-217ENST00000580958 FXYD7P58549 80 aa7.79□□□□□ -1.16
SS18-217ENST00000580958 SPINK13Q1W4C9 94 aa7.79□□□□□ -1.16
SS18-217ENST00000580958 KRTAP24-1Q3LI83 254 aa7.79□□□□□ -1.16
SS18-217ENST00000580958 ODF3L2Q3SX64 289 aa7.79□□□□□ -1.16
SS18-217ENST00000580958 KIAA1644Q3SXP7 199 aa7.79□□□□□ -1.16
SS18-217ENST00000580958 ANXA2RQ3ZCQ2 193 aa7.79□□□□□ -1.16
SS18-217ENST00000580958 MUC21Q5SSG8 566 aa7.79□□□□□ -1.16
SS18-217ENST00000580958 AMTNQ6UX39 209 aa7.79□□□□□ -1.16
SS18-217ENST00000580958 OR2K2Q8NGT1 345 aa7.79□□□□□ -1.16
SS18-217ENST00000580958 SSBP4Q9BWG4 385 aaPredicted RBP7.79□□□□□ -1.16
SS18-217ENST00000580958 TRAV12-2A0A075B6T6 113 aa7.78□□□□□ -1.16
SS18-217ENST00000580958 TRAV12-3A0A0B4J271 114 aa7.78□□□□□ -1.16
SS18-217ENST00000580958 RBMY1BA6NDE4 496 aaKnown RBP7.78□□□□□ -1.16
SS18-217ENST00000580958 RBMY1EA6NEQ0 496 aaKnown RBP7.78□□□□□ -1.16
SS18-217ENST00000580958 C5orf52A6NGY3 159 aa7.78□□□□□ -1.16
SS18-217ENST00000580958 A8MTW9 85 aa7.78□□□□□ -1.16
SS18-217ENST00000580958 H3BMM0 161 aa7.78□□□□□ -1.16
SS18-217ENST00000580958 M0R2Z0 102 aa7.78□□□□□ -1.16
SS18-217ENST00000580958 RBMY1DP0C7P1 496 aaKnown RBP7.78□□□□□ -1.16
SS18-217ENST00000580958 SSTP61278 116 aa7.78□□□□□ -1.16
SS18-217ENST00000580958 SLAQ13239 276 aa7.78□□□□□ -1.16
SS18-217ENST00000580958 GFI1BQ5VTD9 330 aa7.78□□□□□ -1.16
SS18-217ENST00000580958 MUC4Q99102 2169 aa7.78□□□□□ -1.16
SS18-217ENST00000580958 A0A1B0GW15 77 aa7.77□□□□□ -1.17
SS18-217ENST00000580958 OR11H12B2RN74 326 aa7.77□□□□□ -1.17
SS18-217ENST00000580958 H3BVH4 76 aa7.77□□□□□ -1.17
SS18-217ENST00000580958 S100A8P05109 93 aa7.77□□□□□ -1.17
SS18-217ENST00000580958 CDKN1BP46527 198 aa7.77□□□□□ -1.17
SS18-217ENST00000580958 GATD1Q8NB37 220 aa7.77□□□□□ -1.17
SS18-217ENST00000580958 SPATA3Q8NHX4 192 aa7.77□□□□□ -1.17
SS18-217ENST00000580958 UBE2CO00762 179 aa7.76□□□□□ -1.17
SS18-217ENST00000580958 GNRH2O43555 120 aa7.76□□□□□ -1.17
SS18-217ENST00000580958 HOXA5P20719 270 aa7.76□□□□□ -1.17
SS18-217ENST00000580958 CMC4P56277 68 aaPredicted RBP7.76□□□□□ -1.17
SS18-217ENST00000580958 TIMM8BQ9Y5J9 83 aaPredicted RBP7.76□□□□□ -1.17
SS18-217ENST00000580958 F2Z2F3 143 aa7.75□□□□□ -1.17
SS18-217ENST00000580958 SNAI2O43623 268 aa7.75□□□□□ -1.17
SS18-217ENST00000580958 ZNF324O75467 553 aaPredicted RBP7.75□□□□□ -1.17
SS18-217ENST00000580958 CD7P09564 240 aa7.75□□□□□ -1.17
SS18-217ENST00000580958 SRIP30626 198 aa7.75□□□□□ -1.17
SS18-217ENST00000580958 ASIPP42127 132 aa7.75□□□□□ -1.17
SS18-217ENST00000580958 TWIST1Q15672 202 aa7.75□□□□□ -1.17
SS18-217ENST00000580958 BEAN1Q3B7T3 259 aa7.75□□□□□ -1.17
SS18-217ENST00000580958 FAM159AQ6UWV7 190 aa7.75□□□□□ -1.17
SS18-217ENST00000580958 PRIMA1Q86XR5 153 aa7.75□□□□□ -1.17
SS18-217ENST00000580958 OR10AG1Q8NH19 301 aa7.75□□□□□ -1.17
SS18-217ENST00000580958 CNFNQ9BYD5 112 aa7.75□□□□□ -1.17
SS18-217ENST00000580958 NOTCH3Q9UM47 2321 aa7.74□□□□□ -1.17
SS18-217ENST00000580958 MAST4O15021 2626 aa7.74□□□□□ -1.17
SS18-217ENST00000580958 LOC102724200A0A096LPH7 203 aaPredicted RBP7.74□□□□□ -1.17
SS18-217ENST00000580958 FAM229AH3BQW9 127 aa7.74□□□□□ -1.17
SS18-217ENST00000580958 CRXO43186 299 aaPredicted RBP7.74□□□□□ -1.17
SS18-217ENST00000580958 SPRY2O43597 315 aa7.74□□□□□ -1.17
SS18-217ENST00000580958 OR5AL1P0C617 328 aa7.74□□□□□ -1.17
SS18-217ENST00000580958 NTF3P20783 257 aa7.74□□□□□ -1.17
SS18-217ENST00000580958 S100A4P26447 101 aaKnown RBP7.74□□□□□ -1.17
SS18-217ENST00000580958 CACNG7P62955 275 aa7.74□□□□□ -1.17
SS18-217ENST00000580958 COA6Q5JTJ3 125 aaKnown RBP7.74□□□□□ -1.17
SS18-217ENST00000580958 DNLZQ5SXM8 178 aa7.74□□□□□ -1.17
SS18-217ENST00000580958 C9orf66Q5T8R8 295 aa7.74□□□□□ -1.17
SS18-217ENST00000580958 ZNF493Q6ZR52 646 aa7.74□□□□□ -1.17
SS18-217ENST00000580958 STHQ8IWL8 128 aa7.74□□□□□ -1.17
SS18-217ENST00000580958 KCNS1Q96KK3 526 aa7.74□□□□□ -1.17
SS18-217ENST00000580958 MDFIQ99750 246 aa7.74□□□□□ -1.17
SS18-217ENST00000580958 WFDC10AQ9H1F0 79 aa7.74□□□□□ -1.17
SS18-217ENST00000580958 MSRB1Q9NZV6 116 aa7.74□□□□□ -1.17
SS18-217ENST00000580958 VWFP04275 2813 aa7.73□□□□□ -1.17
SS18-217ENST00000580958 IGHV1OR15-1A0A075B7D0 117 aa7.73□□□□□ -1.17
SS18-217ENST00000580958 RBMY1A1P0DJD3 496 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms