RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 LAGE3Q14657 143 aa7.03□□□□□ -1.28
CDK5RAP3-208ENST00000578525 MPV17L2Q567V2 206 aa7.03□□□□□ -1.28
CDK5RAP3-208ENST00000578525 Q6YL49 198 aa7.03□□□□□ -1.28
CDK5RAP3-208ENST00000578525 C2orf91Q6ZV80 131 aa7.03□□□□□ -1.28
CDK5RAP3-208ENST00000578525 WFDC3Q8IUB2 231 aa7.03□□□□□ -1.28
CDK5RAP3-208ENST00000578525 LRRC75A-AS1Q8N1F1 130 aa7.03□□□□□ -1.28
CDK5RAP3-208ENST00000578525 DCANP1Q8TF63 244 aa7.03□□□□□ -1.28
CDK5RAP3-208ENST00000578525 C18orf15Q96N68 181 aa7.03□□□□□ -1.28
CDK5RAP3-208ENST00000578525 BBC3Q96PG8 261 aaPredicted RBP7.03□□□□□ -1.28
CDK5RAP3-208ENST00000578525 ODF3Q96PU9 254 aa7.03□□□□□ -1.28
CDK5RAP3-208ENST00000578525 SMIM2Q9BVW6 85 aa7.03□□□□□ -1.28
CDK5RAP3-208ENST00000578525 COX11Q9Y6N1 276 aa7.03□□□□□ -1.28
CDK5RAP3-208ENST00000578525 NBASA2RRP1 2371 aa7.03□□□□□ -1.28
CDK5RAP3-208ENST00000578525 TRAV26-2A0A0B4J265 109 aa7.02□□□□□ -1.29
CDK5RAP3-208ENST00000578525 A1L4Q6 167 aa7.02□□□□□ -1.29
CDK5RAP3-208ENST00000578525 CD5LO43866 347 aa7.02□□□□□ -1.29
CDK5RAP3-208ENST00000578525 NXPH4O95158 308 aa7.02□□□□□ -1.29
CDK5RAP3-208ENST00000578525 NPSP0C0P6 89 aa7.02□□□□□ -1.29
CDK5RAP3-208ENST00000578525 SRD5A1P18405 259 aa7.02□□□□□ -1.29
CDK5RAP3-208ENST00000578525 SRSF1Q07955 248 aaKnown RBP eCLIP7.02□□□□□ -1.296e-7■■□□□ 13.5
CDK5RAP3-208ENST00000578525 ODF1Q14990 250 aa7.02□□□□□ -1.29
CDK5RAP3-208ENST00000578525 C10orf99Q6UWK7 81 aa7.02□□□□□ -1.29
CDK5RAP3-208ENST00000578525 ZNF843Q8N446 348 aa7.02□□□□□ -1.29
CDK5RAP3-208ENST00000578525 MYOZ3Q8TDC0 251 aa7.02□□□□□ -1.29
CDK5RAP3-208ENST00000578525 AP1S3Q96PC3 154 aa7.02□□□□□ -1.29
CDK5RAP3-208ENST00000578525 C20orf78Q9BR46 151 aa7.02□□□□□ -1.29
CDK5RAP3-208ENST00000578525 ZMAT4Q9H898 229 aa7.02□□□□□ -1.29
CDK5RAP3-208ENST00000578525 ZNF702PQ9H963 129 aa7.02□□□□□ -1.29
CDK5RAP3-208ENST00000578525 DKK2Q9UBU2 259 aa7.02□□□□□ -1.29
CDK5RAP3-208ENST00000578525 PHLDA3Q9Y5J5 127 aa7.02□□□□□ -1.29
CDK5RAP3-208ENST00000578525 ZZEF1O43149 2961 aa7.02□□□□□ -1.29
CDK5RAP3-208ENST00000578525 SPTBN1Q01082 2364 aaKnown RBP7.01□□□□□ -1.29
CDK5RAP3-208ENST00000578525 K7EQG2 157 aa7.01□□□□□ -1.29
CDK5RAP3-208ENST00000578525 LGALS9O00182 355 aa7.01□□□□□ -1.29
CDK5RAP3-208ENST00000578525 SIVA1O15304 175 aa7.01□□□□□ -1.29
CDK5RAP3-208ENST00000578525 GNRH2O43555 120 aa7.01□□□□□ -1.29
CDK5RAP3-208ENST00000578525 PRSS1P07477 247 aa7.01□□□□□ -1.29
CDK5RAP3-208ENST00000578525 SMIM17P0DL12 118 aa7.01□□□□□ -1.29
CDK5RAP3-208ENST00000578525 RNASE3P12724 160 aaKnown RBP7.01□□□□□ -1.29
CDK5RAP3-208ENST00000578525 KIR3DS1Q14943 382 aa7.01□□□□□ -1.29
CDK5RAP3-208ENST00000578525 DEFB113Q30KQ7 82 aa7.01□□□□□ -1.29
CDK5RAP3-208ENST00000578525 BOD1L2Q8IYS8 172 aa7.01□□□□□ -1.29
CDK5RAP3-208ENST00000578525 POM121L12Q8N7R1 296 aa7.01□□□□□ -1.29
CDK5RAP3-208ENST00000578525 MAPK1IP1LQ8NDC0 245 aa7.01□□□□□ -1.29
CDK5RAP3-208ENST00000578525 OR9G4Q8NGQ1 327 aa7.01□□□□□ -1.29
CDK5RAP3-208ENST00000578525 RASL10AQ92737 203 aa7.01□□□□□ -1.29
CDK5RAP3-208ENST00000578525 FOXC2Q99958 501 aa7.01□□□□□ -1.29
CDK5RAP3-208ENST00000578525 SELENOKQ9Y6D0 94 aa7.01□□□□□ -1.29
CDK5RAP3-208ENST00000578525 LAMA5O15230 3695 aa7□□□□□ -1.29
CDK5RAP3-208ENST00000578525 IGHV4OR15-8A0A075B7B6 117 aa7□□□□□ -1.29
CDK5RAP3-208ENST00000578525 A0A087WW49 117 aa7□□□□□ -1.29
CDK5RAP3-208ENST00000578525 C7orf71A4D174 169 aa7□□□□□ -1.29
CDK5RAP3-208ENST00000578525 K7EMI3 77 aa7□□□□□ -1.29
CDK5RAP3-208ENST00000578525 DPM2O94777 84 aa7□□□□□ -1.29
CDK5RAP3-208ENST00000578525 PPP1R17O96001 155 aa7□□□□□ -1.29
CDK5RAP3-208ENST00000578525 IGKCP01834 107 aa7□□□□□ -1.29
CDK5RAP3-208ENST00000578525 MGPP08493 103 aa7□□□□□ -1.29
CDK5RAP3-208ENST00000578525 ZNF124Q15973 351 aa7□□□□□ -1.29
CDK5RAP3-208ENST00000578525 ORMDL2Q53FV1 153 aa7□□□□□ -1.29
CDK5RAP3-208ENST00000578525 TMEM97Q5BJF2 176 aa7□□□□□ -1.29
CDK5RAP3-208ENST00000578525 Q5PR19 223 aa7□□□□□ -1.29
CDK5RAP3-208ENST00000578525 FAM159AQ6UWV7 190 aa7□□□□□ -1.29
CDK5RAP3-208ENST00000578525 C14orf178Q8N769 122 aaPredicted RBP7□□□□□ -1.29
CDK5RAP3-208ENST00000578525 RNF152Q8N8N0 203 aa7□□□□□ -1.29
CDK5RAP3-208ENST00000578525 DCHS2Q6V1P9 2916 aa7□□□□□ -1.29
CDK5RAP3-208ENST00000578525 MED13LQ71F56 2210 aa6.99□□□□□ -1.29
CDK5RAP3-208ENST00000578525 SMG1Q96Q15 3661 aaKnown RBP6.99□□□□□ -1.29
CDK5RAP3-208ENST00000578525 A0A0J9YX75 114 aa6.99□□□□□ -1.29
CDK5RAP3-208ENST00000578525 TAX1BP3O14907 124 aa6.99□□□□□ -1.29
CDK5RAP3-208ENST00000578525 HOXA3O43365 443 aaPredicted RBP6.99□□□□□ -1.29
CDK5RAP3-208ENST00000578525 SPRY2O43597 315 aa6.99□□□□□ -1.29
CDK5RAP3-208ENST00000578525 DUSP14O95147 198 aaKnown RBP6.99□□□□□ -1.29
CDK5RAP3-208ENST00000578525 ZNF688P0C7X2 276 aa6.99□□□□□ -1.29
CDK5RAP3-208ENST00000578525 KRTAP10-9P60411 292 aa6.99□□□□□ -1.29
CDK5RAP3-208ENST00000578525 SUMO2P61956 95 aaKnown RBP6.99□□□□□ -1.29
CDK5RAP3-208ENST00000578525 SNRPD3P62318 126 aaKnown RBP6.99□□□□□ -1.29
CDK5RAP3-208ENST00000578525 SEC11AP67812 179 aa6.99□□□□□ -1.29
CDK5RAP3-208ENST00000578525 HSD52Q0P140 79 aa6.99□□□□□ -1.29
CDK5RAP3-208ENST00000578525 Q6ZVH6 145 aa6.99□□□□□ -1.29
CDK5RAP3-208ENST00000578525 UBE2E2Q96LR5 201 aa6.99□□□□□ -1.29
CDK5RAP3-208ENST00000578525 NCOR2Q9Y618 2525 aa6.98□□□□□ -1.29
CDK5RAP3-208ENST00000578525 LRBAP50851 2863 aa6.98□□□□□ -1.29
CDK5RAP3-208ENST00000578525 A0A087WX48 190 aa6.98□□□□□ -1.29
CDK5RAP3-208ENST00000578525 TRAV12-1A0A0B4J245 112 aa6.98□□□□□ -1.29
CDK5RAP3-208ENST00000578525 HLA-DRB4P13762 266 aa6.98□□□□□ -1.29
CDK5RAP3-208ENST00000578525 NMUP48645 174 aa6.98□□□□□ -1.29
CDK5RAP3-208ENST00000578525 SYNJ2BPP57105 145 aa6.98□□□□□ -1.29
CDK5RAP3-208ENST00000578525 RPL32P62910 135 aaKnown RBP6.98□□□□□ -1.29
CDK5RAP3-208ENST00000578525 Q8N2B8 174 aa6.98□□□□□ -1.29
CDK5RAP3-208ENST00000578525 TOMM6Q96B49 74 aa6.98□□□□□ -1.29
CDK5RAP3-208ENST00000578525 RPL39LQ96EH5 51 aaKnown RBP6.98□□□□□ -1.29
CDK5RAP3-208ENST00000578525 KIF25-AS1Q9Y6Z4 181 aa6.98□□□□□ -1.29
CDK5RAP3-208ENST00000578525 HLA-DRB4X5D2U9 266 aa6.98□□□□□ -1.29
CDK5RAP3-208ENST00000578525 SPTBN4Q9H254 2564 aa6.97□□□□□ -1.29
CDK5RAP3-208ENST00000578525 TRAV12-3A0A0B4J271 114 aa6.97□□□□□ -1.29
CDK5RAP3-208ENST00000578525 CD7P09564 240 aa6.97□□□□□ -1.29
CDK5RAP3-208ENST00000578525 HOXD3P31249 432 aaPredicted RBP6.97□□□□□ -1.29
CDK5RAP3-208ENST00000578525 LINC00315P59091 139 aa6.97□□□□□ -1.29
CDK5RAP3-208ENST00000578525 UBE2V1Q13404 147 aa6.97□□□□□ -1.29
CDK5RAP3-208ENST00000578525 PCP2Q8IVA1 136 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms