RNA–Protein interactions for RNA: ENST00000570641.1

SPNS2-202, Transcript of sphingolipid transporter 2, humanhuman

TSL 5

Gene SPNS2, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-202ENST00000570641 SMCO4Q9NRQ5 59 aa13.23□□□□□ -0.29
SPNS2-202ENST00000570641 TMSB15BA0A087X1C1 80 aa13.22□□□□□ -0.29
SPNS2-202ENST00000570641 IGKV3D-20A0A0C4DH25 116 aa13.22□□□□□ -0.29
SPNS2-202ENST00000570641 CXorf65A6NEN9 183 aa13.22□□□□□ -0.29
SPNS2-202ENST00000570641 CXCL1P09341 107 aa13.22□□□□□ -0.29
SPNS2-202ENST00000570641 S100PP25815 95 aa13.22□□□□□ -0.29
SPNS2-202ENST00000570641 ANXA2RQ3ZCQ2 193 aa13.22□□□□□ -0.29
SPNS2-202ENST00000570641 MUC21Q5SSG8 566 aa13.22□□□□□ -0.29
SPNS2-202ENST00000570641 GOLT1BQ9Y3E0 138 aa13.22□□□□□ -0.29
SPNS2-202ENST00000570641 PKD1L1Q8TDX9 2849 aa13.21□□□□□ -0.29
SPNS2-202ENST00000570641 IGHV1OR15-1A0A075B7D0 117 aa13.21□□□□□ -0.29
SPNS2-202ENST00000570641 FAM231BA6NCW3 169 aa13.21□□□□□ -0.29
SPNS2-202ENST00000570641 GIG44P09565 113 aaPredicted RBP13.21□□□□□ -0.29
SPNS2-202ENST00000570641 RBMY1A1P0DJD3 496 aaKnown RBP13.21□□□□□ -0.29
SPNS2-202ENST00000570641 RBMY1CP0DJD4 496 aa13.21□□□□□ -0.29
SPNS2-202ENST00000570641 RBMY1FQ15415 496 aaKnown RBP13.21□□□□□ -0.29
SPNS2-202ENST00000570641 TDRG1Q3Y452 100 aa13.21□□□□□ -0.29
SPNS2-202ENST00000570641 KCNIP4Q6PIL6 250 aa13.21□□□□□ -0.29
SPNS2-202ENST00000570641 PYGO2Q9BRQ0 406 aa13.21□□□□□ -0.29
SPNS2-202ENST00000570641 TMEM208Q9BTX3 173 aa13.21□□□□□ -0.29
SPNS2-202ENST00000570641 GFRA4Q9GZZ7 299 aa13.21□□□□□ -0.29
SPNS2-202ENST00000570641 UBE2CO00762 179 aa13.2□□□□□ -0.3
SPNS2-202ENST00000570641 SCO1O75880 301 aa13.2□□□□□ -0.3
SPNS2-202ENST00000570641 LINC01587Q99440 93 aa13.2□□□□□ -0.3
SPNS2-202ENST00000570641 LINC00467Q9BRT7 94 aa13.2□□□□□ -0.3
SPNS2-202ENST00000570641 SMIM27A0A1W2PRY6 76 aa13.19□□□□□ -0.3
SPNS2-202ENST00000570641 GZMBP10144 247 aa13.19□□□□□ -0.3
SPNS2-202ENST00000570641 CBLN2Q8IUK8 224 aa13.19□□□□□ -0.3
SPNS2-202ENST00000570641 C1orf158Q8N1D5 194 aa13.19□□□□□ -0.3
SPNS2-202ENST00000570641 MEGF8Q7Z7M0 2845 aa13.18□□□□□ -0.3
SPNS2-202ENST00000570641 TRGV11A0A075B6L2 103 aa13.18□□□□□ -0.3
SPNS2-202ENST00000570641 A0A1W2PPQ1 181 aa13.18□□□□□ -0.3
SPNS2-202ENST00000570641 GRIFINA4D1Z8 144 aa13.18□□□□□ -0.3
SPNS2-202ENST00000570641 ASIPP42127 132 aa13.18□□□□□ -0.3
SPNS2-202ENST00000570641 TCL1AP56279 114 aa13.18□□□□□ -0.3
SPNS2-202ENST00000570641 TMEM88Q6PEY1 159 aa13.18□□□□□ -0.3
SPNS2-202ENST00000570641 CSNK1G2-AS1Q8NCQ2 148 aa13.18□□□□□ -0.3
SPNS2-202ENST00000570641 NEU1Q99519 415 aa13.18□□□□□ -0.3
SPNS2-202ENST00000570641 NAT8BQ9UHF3 227 aa13.18□□□□□ -0.3
SPNS2-202ENST00000570641 CMYA5Q8N3K9 4069 aa13.18□□□□□ -0.3
SPNS2-202ENST00000570641 TRAV9-1A0A075B6T8 112 aa13.17□□□□□ -0.3
SPNS2-202ENST00000570641 CBY3A6NI87 242 aa13.17□□□□□ -0.3
SPNS2-202ENST00000570641 TYMSP04818 313 aa13.17□□□□□ -0.3
SPNS2-202ENST00000570641 S100A4P26447 101 aaKnown RBP13.17□□□□□ -0.3
SPNS2-202ENST00000570641 DNLZQ5SXM8 178 aa13.17□□□□□ -0.3
SPNS2-202ENST00000570641 URGCP-MRPS24S4R325 110 aa13.17□□□□□ -0.3
SPNS2-202ENST00000570641 IGHV3OR16-12A0A075B7B8 117 aa13.16□□□□□ -0.3
SPNS2-202ENST00000570641 HIGD1CA8MV81 97 aa13.16□□□□□ -0.3
SPNS2-202ENST00000570641 GNRH2O43555 120 aa13.16□□□□□ -0.3
SPNS2-202ENST00000570641 MED14OSP0DP75 135 aa13.16□□□□□ -0.3
SPNS2-202ENST00000570641 FOXA3P55318 350 aaPredicted RBP13.16□□□□□ -0.3
SPNS2-202ENST00000570641 FAM3BP58499 235 aaPredicted RBP13.16□□□□□ -0.3
SPNS2-202ENST00000570641 FER1L6-AS1Q8NA97 138 aa13.16□□□□□ -0.3
SPNS2-202ENST00000570641 GTSF1Q8WW33 167 aa13.16□□□□□ -0.3
SPNS2-202ENST00000570641 BTF3L4Q96K17 158 aa13.16□□□□□ -0.3
SPNS2-202ENST00000570641 FRMD6-AS1P0C7T7 363 aa13.15□□□□□ -0.3
SPNS2-202ENST00000570641 IGLC6P0CF74 106 aa13.15□□□□□ -0.3
SPNS2-202ENST00000570641 HTN1P15515 57 aa13.15□□□□□ -0.3
SPNS2-202ENST00000570641 ZNF705AQ6ZN79 300 aaPredicted RBP13.15□□□□□ -0.3
SPNS2-202ENST00000570641 ZNF575Q86XF7 245 aa13.15□□□□□ -0.3
SPNS2-202ENST00000570641 BORCS7Q96B45 105 aa13.15□□□□□ -0.3
SPNS2-202ENST00000570641 F2Z2F3 143 aa13.14□□□□□ -0.31
SPNS2-202ENST00000570641 ELOBQ15370 118 aa13.14□□□□□ -0.31
SPNS2-202ENST00000570641 NUP35Q8NFH5 326 aa13.14□□□□□ -0.31
SPNS2-202ENST00000570641 PGLYRP4Q96LB8 373 aa13.14□□□□□ -0.31
SPNS2-202ENST00000570641 TPPP3Q9BW30 176 aa13.14□□□□□ -0.31
SPNS2-202ENST00000570641 TP53TG3Q9ULZ0 132 aa13.14□□□□□ -0.31
SPNS2-202ENST00000570641 IGHV3-16A0A0C4DH30 117 aa13.13□□□□□ -0.31
SPNS2-202ENST00000570641 H3BVH4 76 aa13.13□□□□□ -0.31
SPNS2-202ENST00000570641 K7EIL1 84 aa13.13□□□□□ -0.31
SPNS2-202ENST00000570641 PRB2P02812 416 aaPredicted RBP13.13□□□□□ -0.31
SPNS2-202ENST00000570641 CTRLP40313 264 aa13.13□□□□□ -0.31
SPNS2-202ENST00000570641 ZNF415Q09FC8 603 aa13.13□□□□□ -0.31
SPNS2-202ENST00000570641 LYZL1Q6UWQ5 148 aa13.13□□□□□ -0.31
SPNS2-202ENST00000570641 Q6ZWC4 215 aa13.13□□□□□ -0.31
SPNS2-202ENST00000570641 SNAI2O43623 268 aa13.12□□□□□ -0.31
SPNS2-202ENST00000570641 OR5AL1P0C617 328 aa13.12□□□□□ -0.31
SPNS2-202ENST00000570641 ARMS2P0C7Q2 107 aa13.12□□□□□ -0.31
SPNS2-202ENST00000570641 DEFB135Q30KP9 77 aa13.12□□□□□ -0.31
SPNS2-202ENST00000570641 YPEL4Q96NS1 127 aa13.12□□□□□ -0.31
SPNS2-202ENST00000570641 RCHY1Q96PM5 261 aa13.12□□□□□ -0.31
SPNS2-202ENST00000570641 SSBP4Q9BWG4 385 aaPredicted RBP13.12□□□□□ -0.31
SPNS2-202ENST00000570641 TIMM8BQ9Y5J9 83 aaPredicted RBP13.12□□□□□ -0.31
SPNS2-202ENST00000570641 MGAM2Q2M2H8 2515 aa13.11□□□□□ -0.31
SPNS2-202ENST00000570641 TRBV24-1A0A075B6N3 115 aa13.11□□□□□ -0.31
SPNS2-202ENST00000570641 RNASE3P12724 160 aaKnown RBP13.11□□□□□ -0.31
SPNS2-202ENST00000570641 RRN3P1Q2M238 152 aa13.11□□□□□ -0.31
SPNS2-202ENST00000570641 WDR73Q6P4I2 378 aa13.11□□□□□ -0.31
SPNS2-202ENST00000570641 A0A1B0GUT8 65 aa13.1□□□□□ -0.31
SPNS2-202ENST00000570641 SMIM9A6NGZ8 99 aa13.1□□□□□ -0.31
SPNS2-202ENST00000570641 CACNG7P62955 275 aa13.1□□□□□ -0.31
SPNS2-202ENST00000570641 RIGQ13278 110 aa13.1□□□□□ -0.31
SPNS2-202ENST00000570641 ZNF493Q6ZR52 646 aa13.1□□□□□ -0.31
SPNS2-202ENST00000570641 ATP5L2Q7Z4Y8 100 aa13.1□□□□□ -0.31
SPNS2-202ENST00000570641 TMEM263Q8WUH6 116 aaKnown RBP13.1□□□□□ -0.31
SPNS2-202ENST00000570641 RNF183Q96D59 192 aa13.1□□□□□ -0.31
SPNS2-202ENST00000570641 C16orf74Q96GX8 76 aa13.1□□□□□ -0.31
SPNS2-202ENST00000570641 C9orf85Q96MD7 179 aa13.1□□□□□ -0.31
SPNS2-202ENST00000570641 SCRT2Q9NQ03 307 aa13.1□□□□□ -0.31
SPNS2-202ENST00000570641 MDFICQ9P1T7 246 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms