RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 RHOHQ15669 191 aa-0.58□□□□□ -2.5
PSMA4-221ENST00000560842 TMEM78Q5T7P6 136 aa-0.58□□□□□ -2.5
PSMA4-221ENST00000560842 LINC00305Q7Z4B0 112 aa-0.58□□□□□ -2.5
PSMA4-221ENST00000560842 DYDC1Q8WWB3 177 aa-0.58□□□□□ -2.5
PSMA4-221ENST00000560842 HOPXQ9BPY8 73 aaPredicted RBP-0.58□□□□□ -2.5
PSMA4-221ENST00000560842 ABCA1O95477 2261 aa-0.59□□□□□ -2.5
PSMA4-221ENST00000560842 A0A0G2JMM0 328 aa-0.59□□□□□ -2.5
PSMA4-221ENST00000560842 TMEM189A5PLL7 270 aa-0.59□□□□□ -2.5
PSMA4-221ENST00000560842 PPP5D1E7EU14 171 aa-0.59□□□□□ -2.5
PSMA4-221ENST00000560842 SLC25A4P12235 298 aa-0.59□□□□□ -2.5
PSMA4-221ENST00000560842 DCUN1D2Q6PH85 259 aa-0.59□□□□□ -2.5
PSMA4-221ENST00000560842 PTPRGP23470 1445 aa-0.59□□□□□ -2.5
PSMA4-221ENST00000560842 PTPN13Q12923 2485 aa-0.59□□□□□ -2.5
PSMA4-221ENST00000560842 SPAG17Q6Q759 2223 aa-0.6□□□□□ -2.5
PSMA4-221ENST00000560842 NINQ8N4C6 2090 aa-0.6□□□□□ -2.5
PSMA4-221ENST00000560842 UNC13BO14795 1591 aa-0.6□□□□□ -2.51
PSMA4-221ENST00000560842 TRAV13-1A0A0B4J241 112 aa-0.6□□□□□ -2.51
PSMA4-221ENST00000560842 MAP1LC3B2A6NCE7 125 aa-0.6□□□□□ -2.51
PSMA4-221ENST00000560842 EDF1O60869 148 aaKnown RBP-0.6□□□□□ -2.51
PSMA4-221ENST00000560842 IGKCP01834 107 aa-0.6□□□□□ -2.51
PSMA4-221ENST00000560842 SRP9P49458 86 aaKnown RBP-0.6□□□□□ -2.51
PSMA4-221ENST00000560842 GTF2A1P52655 376 aaPredicted RBP-0.6□□□□□ -2.51
PSMA4-221ENST00000560842 CRYBA4P53673 196 aa-0.6□□□□□ -2.51
PSMA4-221ENST00000560842 OR51A4Q8NGJ6 313 aa-0.6□□□□□ -2.51
PSMA4-221ENST00000560842 CADP27708 2225 aa-0.6□□□□□ -2.51
PSMA4-221ENST00000560842 ROCK1Q13464 1354 aa-0.6□□□□□ -2.51
PSMA4-221ENST00000560842 HSPG2P98160 4391 aa-0.6□□□□□ -2.51
PSMA4-221ENST00000560842 MED13LQ71F56 2210 aa-0.61□□□□□ -2.51
PSMA4-221ENST00000560842 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.61□□□□□ -2.51
PSMA4-221ENST00000560842 TMEM238C9JI98 176 aa-0.61□□□□□ -2.51
PSMA4-221ENST00000560842 CDC42EP2O14613 210 aa-0.61□□□□□ -2.51
PSMA4-221ENST00000560842 C3orf33Q6P1S2 294 aa-0.61□□□□□ -2.51
PSMA4-221ENST00000560842 KIDINS220Q9ULH0 1771 aa-0.62□□□□□ -2.51
PSMA4-221ENST00000560842 FER1L6Q2WGJ9 1857 aa-0.62□□□□□ -2.51
PSMA4-221ENST00000560842 MCRIP1C9JLW8 97 aa-0.62□□□□□ -2.51
PSMA4-221ENST00000560842 ETV6P41212 452 aa-0.62□□□□□ -2.51
PSMA4-221ENST00000560842 BLCAPP62952 87 aa-0.62□□□□□ -2.51
PSMA4-221ENST00000560842 TEX29Q8N6K0 151 aa-0.62□□□□□ -2.51
PSMA4-221ENST00000560842 LXNQ9BS40 222 aa-0.62□□□□□ -2.51
PSMA4-221ENST00000560842 ATG5Q9H1Y0 275 aa-0.62□□□□□ -2.51
PSMA4-221ENST00000560842 TNS1Q9HBL0 1735 aaKnown RBP-0.63□□□□□ -2.51
PSMA4-221ENST00000560842 H3BMG7 143 aa-0.63□□□□□ -2.51
PSMA4-221ENST00000560842 SMIM7Q9BQ49 75 aa-0.63□□□□□ -2.51
PSMA4-221ENST00000560842 MED31Q9Y3C7 131 aa-0.63□□□□□ -2.51
PSMA4-221ENST00000560842 LAMC3Q9Y6N6 1575 aa-0.63□□□□□ -2.51
PSMA4-221ENST00000560842 KMT2AQ03164 3969 aa-0.63□□□□□ -2.51
PSMA4-221ENST00000560842 TNXBP22105 4242 aa-0.63□□□□□ -2.51
PSMA4-221ENST00000560842 SOGA1O94964 1423 aa-0.64□□□□□ -2.51
PSMA4-221ENST00000560842 LRP5O75197 1615 aa-0.64□□□□□ -2.51
PSMA4-221ENST00000560842 IL7P13232 177 aa-0.64□□□□□ -2.51
PSMA4-221ENST00000560842 CRYGSP22914 178 aa-0.64□□□□□ -2.51
PSMA4-221ENST00000560842 IDO2Q6ZQW0 420 aa-0.64□□□□□ -2.51
PSMA4-221ENST00000560842 NAT14Q8WUY8 206 aa-0.64□□□□□ -2.51
PSMA4-221ENST00000560842 MYH1P12882 1939 aa-0.64□□□□□ -2.51
PSMA4-221ENST00000560842 LOC107984640A0A0U1RRK4 108 aa-0.65□□□□□ -2.51
PSMA4-221ENST00000560842 A0A1W2PRE2 83 aa-0.65□□□□□ -2.51
PSMA4-221ENST00000560842 CCKP06307 115 aa-0.65□□□□□ -2.51
PSMA4-221ENST00000560842 IFITM1P13164 125 aa-0.65□□□□□ -2.51
PSMA4-221ENST00000560842 COX6A2Q02221 97 aa-0.65□□□□□ -2.51
PSMA4-221ENST00000560842 HRCT1Q6UXD1 115 aa-0.65□□□□□ -2.51
PSMA4-221ENST00000560842 STX12Q86Y82 276 aa-0.65□□□□□ -2.51
PSMA4-221ENST00000560842 OR5A2Q8NGI9 324 aa-0.65□□□□□ -2.51
PSMA4-221ENST00000560842 DSCR8Q96T75 97 aa-0.65□□□□□ -2.51
PSMA4-221ENST00000560842 CCDC32Q9BV29 185 aa-0.65□□□□□ -2.51
PSMA4-221ENST00000560842 CBLN4Q9NTU7 201 aa-0.65□□□□□ -2.51
PSMA4-221ENST00000560842 AKAP6Q13023 2319 aa-0.65□□□□□ -2.51
PSMA4-221ENST00000560842 DCHS2Q6V1P9 2916 aa-0.65□□□□□ -2.51
PSMA4-221ENST00000560842 PGRMC1O00264 195 aaKnown RBP-0.66□□□□□ -2.52
PSMA4-221ENST00000560842 FAM107AO95990 144 aa-0.66□□□□□ -2.52
PSMA4-221ENST00000560842 BASP1P80723 227 aaKnown RBP-0.66□□□□□ -2.52
PSMA4-221ENST00000560842 THEM6Q8WUY1 208 aa-0.66□□□□□ -2.52
PSMA4-221ENST00000560842 PRR15LQ9BU68 103 aa-0.66□□□□□ -2.52
PSMA4-221ENST00000560842 GID8Q9NWU2 228 aa-0.66□□□□□ -2.52
PSMA4-221ENST00000560842 A2MP01023 1474 aa-0.67□□□□□ -2.52
PSMA4-221ENST00000560842 PTPRQQ9UMZ3 2332 aa-0.67□□□□□ -2.52
PSMA4-221ENST00000560842 TRBV10-1A0A0K0K1A3 114 aa-0.67□□□□□ -2.52
PSMA4-221ENST00000560842 HBDP02042 147 aa-0.67□□□□□ -2.52
PSMA4-221ENST00000560842 POLR2HP52434 150 aaKnown RBP-0.67□□□□□ -2.52
PSMA4-221ENST00000560842 KRTAP19-7Q3SYF9 63 aa-0.67□□□□□ -2.52
PSMA4-221ENST00000560842 OR4S1Q8NGB4 309 aa-0.67□□□□□ -2.52
PSMA4-221ENST00000560842 OTOSQ8NHW6 89 aa-0.67□□□□□ -2.52
PSMA4-221ENST00000560842 CDK13Q14004 1512 aaKnown RBP-0.68□□□□□ -2.52
PSMA4-221ENST00000560842 DOPEY2Q9Y3R5 2298 aa-0.68□□□□□ -2.52
PSMA4-221ENST00000560842 TEX49A0A1B0GTD5 131 aa-0.68□□□□□ -2.52
PSMA4-221ENST00000560842 LSM3P62310 102 aaKnown RBP-0.68□□□□□ -2.52
PSMA4-221ENST00000560842 TRIQKQ629K1 86 aa-0.68□□□□□ -2.52
PSMA4-221ENST00000560842 PKD1L1Q8TDX9 2849 aa-0.69□□□□□ -2.52
PSMA4-221ENST00000560842 MYCBP2O75592 4640 aa-0.69□□□□□ -2.52
PSMA4-221ENST00000560842 SPTBN2O15020 2390 aa-0.69□□□□□ -2.52
PSMA4-221ENST00000560842 F5P12259 2224 aa-0.69□□□□□ -2.52
PSMA4-221ENST00000560842 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.69□□□□□ -2.52
PSMA4-221ENST00000560842 CSMD3Q7Z407 3707 aa-0.69□□□□□ -2.52
PSMA4-221ENST00000560842 TENM2Q9NT68 2774 aa-0.69□□□□□ -2.52
PSMA4-221ENST00000560842 PYYP10082 97 aa-0.69□□□□□ -2.52
PSMA4-221ENST00000560842 ADCYAP1P18509 176 aa-0.69□□□□□ -2.52
PSMA4-221ENST00000560842 SDC4P31431 198 aa-0.69□□□□□ -2.52
PSMA4-221ENST00000560842 EMX2Q04743 252 aa-0.69□□□□□ -2.52
PSMA4-221ENST00000560842 IQCJQ1A5X6 159 aa-0.69□□□□□ -2.52
PSMA4-221ENST00000560842 LPAP08519 4548 aa-0.7□□□□□ -2.52
PSMA4-221ENST00000560842 IGHV1-24A0A0C4DH33 117 aa-0.7□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms