RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 RHEBQ15382 184 aa7.6□□□□□ -1.19
TPM1-221ENST00000559831 DEFB135Q30KP9 77 aa7.6□□□□□ -1.19
TPM1-221ENST00000559831 LINC01559Q495D7 138 aa7.6□□□□□ -1.19
TPM1-221ENST00000559831 C1orf158Q8N1D5 194 aa7.6□□□□□ -1.19
TPM1-221ENST00000559831 MRAPQ8TCY5 172 aa7.6□□□□□ -1.19
TPM1-221ENST00000559831 C20orf144Q9BQM9 153 aa7.6□□□□□ -1.19
TPM1-221ENST00000559831 IGKV3D-20A0A0C4DH25 116 aa7.59□□□□□ -1.19
TPM1-221ENST00000559831 GRIFINA4D1Z8 144 aa7.59□□□□□ -1.19
TPM1-221ENST00000559831 UBE2CO00762 179 aa7.59□□□□□ -1.19
TPM1-221ENST00000559831 PPP1R2P9O14990 202 aa7.59□□□□□ -1.19
TPM1-221ENST00000559831 GZMBP10144 247 aa7.59□□□□□ -1.19
TPM1-221ENST00000559831 ATRAIDQ6UW56 229 aa7.59□□□□□ -1.19
TPM1-221ENST00000559831 TMEM256Q8N2U0 113 aa7.59□□□□□ -1.19
TPM1-221ENST00000559831 CSNK1G2-AS1Q8NCQ2 148 aa7.59□□□□□ -1.19
TPM1-221ENST00000559831 ANAPC16Q96DE5 110 aa7.59□□□□□ -1.19
TPM1-221ENST00000559831 RCHY1Q96PM5 261 aa7.59□□□□□ -1.19
TPM1-221ENST00000559831 V9GYV3 84 aa7.59□□□□□ -1.19
TPM1-221ENST00000559831 DNAH3Q8TD57 4116 aa7.58□□□□□ -1.2
TPM1-221ENST00000559831 CBY3A6NI87 242 aa7.58□□□□□ -1.2
TPM1-221ENST00000559831 GNRH2O43555 120 aa7.58□□□□□ -1.2
TPM1-221ENST00000559831 PRM2P04554 102 aa7.58□□□□□ -1.2
TPM1-221ENST00000559831 TYMSP04818 313 aa7.58□□□□□ -1.2
TPM1-221ENST00000559831 TCL1AP56279 114 aa7.58□□□□□ -1.2
TPM1-221ENST00000559831 RPS20P60866 119 aaKnown RBP7.58□□□□□ -1.2
TPM1-221ENST00000559831 KCNS1Q96KK3 526 aa7.58□□□□□ -1.2
TPM1-221ENST00000559831 PYGO2Q9BRQ0 406 aa7.58□□□□□ -1.2
TPM1-221ENST00000559831 TP53TG3Q9ULZ0 132 aa7.58□□□□□ -1.2
TPM1-221ENST00000559831 TIMM8BQ9Y5J9 83 aaPredicted RBP7.58□□□□□ -1.2
TPM1-221ENST00000559831 TRGV11A0A075B6L2 103 aa7.57□□□□□ -1.2
TPM1-221ENST00000559831 XKRY2A2RUG3 117 aa7.57□□□□□ -1.2
TPM1-221ENST00000559831 S100A4P26447 101 aaKnown RBP7.57□□□□□ -1.2
TPM1-221ENST00000559831 ASIPP42127 132 aa7.57□□□□□ -1.2
TPM1-221ENST00000559831 TPPP3Q9BW30 176 aa7.57□□□□□ -1.2
TPM1-221ENST00000559831 CTDSP1Q9GZU7 261 aa7.57□□□□□ -1.2
TPM1-221ENST00000559831 RETNQ9HD89 108 aa7.57□□□□□ -1.2
TPM1-221ENST00000559831 A0A087WWC5 75 aa7.56□□□□□ -1.2
TPM1-221ENST00000559831 A8MWL6 223 aa7.56□□□□□ -1.2
TPM1-221ENST00000559831 H3BVH4 76 aa7.56□□□□□ -1.2
TPM1-221ENST00000559831 SPRY2O43597 315 aa7.56□□□□□ -1.2
TPM1-221ENST00000559831 DEFA6Q01524 100 aa7.56□□□□□ -1.2
TPM1-221ENST00000559831 TDRG1Q3Y452 100 aa7.56□□□□□ -1.2
TPM1-221ENST00000559831 CT83Q5H943 113 aa7.56□□□□□ -1.2
TPM1-221ENST00000559831 ZNF705AQ6ZN79 300 aaPredicted RBP7.56□□□□□ -1.2
TPM1-221ENST00000559831 Q6ZWC4 215 aa7.56□□□□□ -1.2
TPM1-221ENST00000559831 OR11H2Q8NH07 326 aa7.56□□□□□ -1.2
TPM1-221ENST00000559831 TSKUQ8WUA8 353 aa7.56□□□□□ -1.2
TPM1-221ENST00000559831 RNF183Q96D59 192 aa7.56□□□□□ -1.2
TPM1-221ENST00000559831 LINC00467Q9BRT7 94 aa7.56□□□□□ -1.2
TPM1-221ENST00000559831 IL36BQ9NZH7 164 aa7.56□□□□□ -1.2
TPM1-221ENST00000559831 IGHV3-16A0A0C4DH30 117 aa7.55□□□□□ -1.2
TPM1-221ENST00000559831 SCO1O75880 301 aa7.55□□□□□ -1.2
TPM1-221ENST00000559831 AZU1P20160 251 aa7.55□□□□□ -1.2
TPM1-221ENST00000559831 ZNF415Q09FC8 603 aa7.55□□□□□ -1.2
TPM1-221ENST00000559831 RRN3P1Q2M238 152 aa7.55□□□□□ -1.2
TPM1-221ENST00000559831 SBSPONQ8IVN8 264 aa7.55□□□□□ -1.2
TPM1-221ENST00000559831 FER1L6-AS1Q8NA97 138 aa7.55□□□□□ -1.2
TPM1-221ENST00000559831 PGLYRP4Q96LB8 373 aa7.55□□□□□ -1.2
TPM1-221ENST00000559831 NEU1Q99519 415 aa7.55□□□□□ -1.2
TPM1-221ENST00000559831 MDFICQ9P1T7 246 aa7.55□□□□□ -1.2
TPM1-221ENST00000559831 NBEAL1Q6ZS30 2694 aa7.55□□□□□ -1.2
TPM1-221ENST00000559831 MUC21A0A0G2JKD1 596 aa7.54□□□□□ -1.2
TPM1-221ENST00000559831 MUC21A0A140T8X8 626 aa7.54□□□□□ -1.2
TPM1-221ENST00000559831 CXCL1P09341 107 aa7.54□□□□□ -1.2
TPM1-221ENST00000559831 FAM3BP58499 235 aaPredicted RBP7.54□□□□□ -1.2
TPM1-221ENST00000559831 SSTP61278 116 aa7.54□□□□□ -1.2
TPM1-221ENST00000559831 KCNIP4Q6PIL6 250 aa7.54□□□□□ -1.2
TPM1-221ENST00000559831 ZNF575Q86XF7 245 aa7.54□□□□□ -1.2
TPM1-221ENST00000559831 TMEM263Q8WUH6 116 aaKnown RBP7.54□□□□□ -1.2
TPM1-221ENST00000559831 GTSF1Q8WW33 167 aa7.54□□□□□ -1.2
TPM1-221ENST00000559831 C16orf74Q96GX8 76 aa7.54□□□□□ -1.2
TPM1-221ENST00000559831 GSN-AS1Q9NRJ2 163 aa7.54□□□□□ -1.2
TPM1-221ENST00000559831 NAT8BQ9UHF3 227 aa7.54□□□□□ -1.2
TPM1-221ENST00000559831 URGCP-MRPS24S4R325 110 aa7.54□□□□□ -1.2
TPM1-221ENST00000559831 X6R8D5 127 aa7.54□□□□□ -1.2
TPM1-221ENST00000559831 MUC4Q99102 2169 aa7.54□□□□□ -1.2
TPM1-221ENST00000559831 A0A1W2PPQ1 181 aa7.53□□□□□ -1.2
TPM1-221ENST00000559831 SMIM27A0A1W2PRY6 76 aa7.53□□□□□ -1.2
TPM1-221ENST00000559831 HIGD1CA8MV81 97 aa7.53□□□□□ -1.2
TPM1-221ENST00000559831 SPINK4O60575 86 aa7.53□□□□□ -1.2
TPM1-221ENST00000559831 ARMS2P0C7Q2 107 aa7.53□□□□□ -1.2
TPM1-221ENST00000559831 IGLC6P0CF74 106 aa7.53□□□□□ -1.2
TPM1-221ENST00000559831 RNASE3P12724 160 aaKnown RBP7.53□□□□□ -1.2
TPM1-221ENST00000559831 S100PP25815 95 aa7.53□□□□□ -1.2
TPM1-221ENST00000559831 EMP1P54849 157 aa7.53□□□□□ -1.2
TPM1-221ENST00000559831 TMEM88Q6PEY1 159 aa7.53□□□□□ -1.2
TPM1-221ENST00000559831 LYZL1Q6UWQ5 148 aa7.53□□□□□ -1.2
TPM1-221ENST00000559831 CBLN2Q8IUK8 224 aa7.53□□□□□ -1.2
TPM1-221ENST00000559831 BORCS7Q96B45 105 aa7.53□□□□□ -1.2
TPM1-221ENST00000559831 SPATA25Q9BR10 227 aa7.53□□□□□ -1.2
TPM1-221ENST00000559831 OVOL2Q9BRP0 275 aa7.53□□□□□ -1.2
TPM1-221ENST00000559831 GFRA4Q9GZZ7 299 aa7.53□□□□□ -1.2
TPM1-221ENST00000559831 TMEM242Q9NWH2 141 aa7.53□□□□□ -1.2
TPM1-221ENST00000559831 IGHV4-28A0A0C4DH34 117 aa7.52□□□□□ -1.21
TPM1-221ENST00000559831 SMIM9A6NGZ8 99 aa7.52□□□□□ -1.21
TPM1-221ENST00000559831 SNURFLB1AK76 121 aa7.52□□□□□ -1.21
TPM1-221ENST00000559831 MED14OSP0DP75 135 aa7.52□□□□□ -1.21
TPM1-221ENST00000559831 DNLZQ5SXM8 178 aa7.52□□□□□ -1.21
TPM1-221ENST00000559831 ZNF493Q6ZR52 646 aa7.52□□□□□ -1.21
TPM1-221ENST00000559831 C11orf72Q8NBR9 251 aa7.52□□□□□ -1.21
TPM1-221ENST00000559831 NUP35Q8NFH5 326 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms