RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 WFDC3Q8IUB2 231 aa9.67□□□□□ -0.86
SMAD3-207ENST00000558763 C3orf56Q8N813 242 aa9.67□□□□□ -0.86
SMAD3-207ENST00000558763 OR9G4Q8NGQ1 327 aa9.67□□□□□ -0.86
SMAD3-207ENST00000558763 DPF1Q92782 380 aa9.67□□□□□ -0.86
SMAD3-207ENST00000558763 TRBV7-9A0A0J9YWB2 115 aa9.66□□□□□ -0.86
SMAD3-207ENST00000558763 CSN3P07498 182 aa9.66□□□□□ -0.86
SMAD3-207ENST00000558763 ZNF688P0C7X2 276 aa9.66□□□□□ -0.86
SMAD3-207ENST00000558763 ZNF493Q6ZR52 646 aa9.66□□□□□ -0.86
SMAD3-207ENST00000558763 FER1L6-AS1Q8NA97 138 aa9.66□□□□□ -0.86
SMAD3-207ENST00000558763 TPPP3Q9BW30 176 aa9.66□□□□□ -0.86
SMAD3-207ENST00000558763 LOC102724200A0A096LPH7 203 aaPredicted RBP9.66□□□□□ -0.86
SMAD3-207ENST00000558763 ID1P41134 155 aa9.66□□□□□ -0.86
SMAD3-207ENST00000558763 TFPI2P48307 235 aa9.66□□□□□ -0.86
SMAD3-207ENST00000558763 RIGQ13278 110 aa9.66□□□□□ -0.86
SMAD3-207ENST00000558763 MUC21A0A0G2JKD1 596 aa9.65□□□□□ -0.86
SMAD3-207ENST00000558763 MUC21A0A140T8X8 626 aa9.65□□□□□ -0.86
SMAD3-207ENST00000558763 A0A1B0GW15 77 aa9.65□□□□□ -0.86
SMAD3-207ENST00000558763 CCL24O00175 119 aa9.65□□□□□ -0.86
SMAD3-207ENST00000558763 IQCJQ1A5X6 159 aa9.65□□□□□ -0.86
SMAD3-207ENST00000558763 PSMG4Q5JS54 123 aa9.65□□□□□ -0.86
SMAD3-207ENST00000558763 MUC21Q5SSG8 566 aa9.65□□□□□ -0.86
SMAD3-207ENST00000558763 CDPF1Q6NVV7 123 aa9.65□□□□□ -0.86
SMAD3-207ENST00000558763 A0A0J9YX75 114 aa9.64□□□□□ -0.87
SMAD3-207ENST00000558763 KLLNB2CW77 178 aa9.64□□□□□ -0.87
SMAD3-207ENST00000558763 MDFIQ99750 246 aa9.64□□□□□ -0.87
SMAD3-207ENST00000558763 ZNF747Q9BV97 191 aa9.64□□□□□ -0.87
SMAD3-207ENST00000558763 ANK2Q01484 3957 aa9.64□□□□□ -0.87
SMAD3-207ENST00000558763 BAGE3Q86Y29 109 aa9.64□□□□□ -0.87
SMAD3-207ENST00000558763 URB1-AS1Q96HZ7 61 aa9.64□□□□□ -0.87
SMAD3-207ENST00000558763 PEMTQ9UBM1 199 aa9.64□□□□□ -0.87
SMAD3-207ENST00000558763 TRRAPQ9Y4A5 3859 aa9.63□□□□□ -0.87
SMAD3-207ENST00000558763 J3KRW8 73 aa9.63□□□□□ -0.87
SMAD3-207ENST00000558763 TMEM61Q8N0U2 210 aa9.63□□□□□ -0.87
SMAD3-207ENST00000558763 TMEM18Q96B42 140 aa9.63□□□□□ -0.87
SMAD3-207ENST00000558763 MSRB1Q9NZV6 116 aa9.63□□□□□ -0.87
SMAD3-207ENST00000558763 M0QZ24 198 aa9.63□□□□□ -0.87
SMAD3-207ENST00000558763 CD33P20138 364 aa9.63□□□□□ -0.87
SMAD3-207ENST00000558763 SNRPD3P62318 126 aaKnown RBP9.63□□□□□ -0.87
SMAD3-207ENST00000558763 SNAI2O43623 268 aa9.62□□□□□ -0.87
SMAD3-207ENST00000558763 PF4P02776 101 aa9.62□□□□□ -0.87
SMAD3-207ENST00000558763 NTF3P20783 257 aa9.62□□□□□ -0.87
SMAD3-207ENST00000558763 KCNS1Q96KK3 526 aa9.62□□□□□ -0.87
SMAD3-207ENST00000558763 ODF3Q96PU9 254 aa9.62□□□□□ -0.87
SMAD3-207ENST00000558763 TRAV2A0A0B4J234 112 aa9.61□□□□□ -0.87
SMAD3-207ENST00000558763 TRAV21A0A0B4J279 112 aa9.61□□□□□ -0.87
SMAD3-207ENST00000558763 GPX1P07203 203 aa9.61□□□□□ -0.87
SMAD3-207ENST00000558763 RIPPLY3P57055 190 aa9.61□□□□□ -0.87
SMAD3-207ENST00000558763 DEFB114Q30KQ6 69 aa9.61□□□□□ -0.87
SMAD3-207ENST00000558763 DMRTA1Q5VZB9 504 aa9.61□□□□□ -0.87
SMAD3-207ENST00000558763 AMTNQ6UX39 209 aa9.61□□□□□ -0.87
SMAD3-207ENST00000558763 BORCS7Q96B45 105 aa9.61□□□□□ -0.87
SMAD3-207ENST00000558763 OR5AL1P0C617 328 aa9.61□□□□□ -0.87
SMAD3-207ENST00000558763 RNASE4P34096 147 aaKnown RBP9.61□□□□□ -0.87
SMAD3-207ENST00000558763 SSTP61278 116 aa9.61□□□□□ -0.87
SMAD3-207ENST00000558763 FAM104BQ5XKR9 115 aa9.61□□□□□ -0.87
SMAD3-207ENST00000558763 SHISA2Q6UWI4 295 aa9.61□□□□□ -0.87
SMAD3-207ENST00000558763 Q6ZWC4 215 aa9.61□□□□□ -0.87
SMAD3-207ENST00000558763 AMN1Q8IY45 258 aa9.61□□□□□ -0.87
SMAD3-207ENST00000558763 OR10AG1Q8NH19 301 aa9.61□□□□□ -0.87
SMAD3-207ENST00000558763 U3KQK5 164 aa9.61□□□□□ -0.87
SMAD3-207ENST00000558763 MUC4Q99102 2169 aa9.6□□□□□ -0.87
SMAD3-207ENST00000558763 A8MTW9 85 aa9.6□□□□□ -0.87
SMAD3-207ENST00000558763 JOSD1Q15040 202 aaPredicted RBP9.6□□□□□ -0.87
SMAD3-207ENST00000558763 ANXA2RQ3ZCQ2 193 aa9.6□□□□□ -0.87
SMAD3-207ENST00000558763 IGHV4-4A0A075B6R2 117 aa9.59□□□□□ -0.87
SMAD3-207ENST00000558763 PAFAH1B2P68402 229 aa9.59□□□□□ -0.87
SMAD3-207ENST00000558763 TWIST1Q15672 202 aa9.59□□□□□ -0.87
SMAD3-207ENST00000558763 FOXI2Q6ZQN5 318 aa9.59□□□□□ -0.87
SMAD3-207ENST00000558763 RNF185Q96GF1 192 aa9.59□□□□□ -0.87
SMAD3-207ENST00000558763 TMEM191AQ9H0A3 160 aa9.59□□□□□ -0.87
SMAD3-207ENST00000558763 NIT2Q9NQR4 276 aa9.59□□□□□ -0.87
SMAD3-207ENST00000558763 ZNF256Q9Y2P7 627 aaPredicted RBP9.59□□□□□ -0.87
SMAD3-207ENST00000558763 H3BVH4 76 aa9.59□□□□□ -0.87
SMAD3-207ENST00000558763 ZNF324O75467 553 aaPredicted RBP9.59□□□□□ -0.87
SMAD3-207ENST00000558763 CD300EQ496F6 205 aaPredicted RBP9.59□□□□□ -0.87
SMAD3-207ENST00000558763 MRPL51Q4U2R6 128 aaKnown RBP9.59□□□□□ -0.87
SMAD3-207ENST00000558763 SIGLEC8Q9NYZ4 499 aa9.59□□□□□ -0.87
SMAD3-207ENST00000558763 DNLZQ5SXM8 178 aa9.58□□□□□ -0.88
SMAD3-207ENST00000558763 NIT1Q86X76 327 aa9.58□□□□□ -0.88
SMAD3-207ENST00000558763 LINC00482Q8N8I6 264 aa9.58□□□□□ -0.88
SMAD3-207ENST00000558763 SCRT2Q9NQ03 307 aa9.58□□□□□ -0.88
SMAD3-207ENST00000558763 NAGKQ9UJ70 344 aa9.58□□□□□ -0.88
SMAD3-207ENST00000558763 RNASE3P12724 160 aaKnown RBP9.57□□□□□ -0.88
SMAD3-207ENST00000558763 ZNF124Q15973 351 aa9.57□□□□□ -0.88
SMAD3-207ENST00000558763 SPATA3Q8NHX4 192 aa9.57□□□□□ -0.88
SMAD3-207ENST00000558763 PKD1L1Q8TDX9 2849 aa9.57□□□□□ -0.88
SMAD3-207ENST00000558763 RBMY1BA6NDE4 496 aaKnown RBP9.57□□□□□ -0.88
SMAD3-207ENST00000558763 RBMY1EA6NEQ0 496 aaKnown RBP9.57□□□□□ -0.88
SMAD3-207ENST00000558763 D6R8Y8 96 aa9.57□□□□□ -0.88
SMAD3-207ENST00000558763 M0R2Z0 102 aa9.57□□□□□ -0.88
SMAD3-207ENST00000558763 IGKV3-20P01619 116 aa9.57□□□□□ -0.88
SMAD3-207ENST00000558763 RBMY1DP0C7P1 496 aaKnown RBP9.57□□□□□ -0.88
SMAD3-207ENST00000558763 DEFB131AP59861 70 aa9.57□□□□□ -0.88
SMAD3-207ENST00000558763 EBLN2Q6P2I7 272 aa9.57□□□□□ -0.88
SMAD3-207ENST00000558763 FAM19A2Q8N3H0 131 aa9.57□□□□□ -0.88
SMAD3-207ENST00000558763 DYNLRB2Q8TF09 96 aa9.57□□□□□ -0.88
SMAD3-207ENST00000558763 MAP6D1Q9H9H5 199 aa9.57□□□□□ -0.88
SMAD3-207ENST00000558763 C7orf71A4D174 169 aa9.56□□□□□ -0.88
SMAD3-207ENST00000558763 KNCNA6PVL3 124 aa9.56□□□□□ -0.88
SMAD3-207ENST00000558763 GNRH2O43555 120 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms