RNA–Protein interactions for RNA: ENST00000555934.1

LINC00643-204, long intergenic non-protein coding RNA 643, humanhuman

TSL 2

Gene LINC00643, Length 1,184 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-204ENST00000555934 BLCAPP62952 87 aa2.22□□□□□ -2.05
LINC00643-204ENST00000555934 SUPT4H1P63272 117 aaKnown RBP2.22□□□□□ -2.05
LINC00643-204ENST00000555934 MRPS36P82909 103 aaKnown RBP2.22□□□□□ -2.05
LINC00643-204ENST00000555934 ZNF846Q147U1 533 aa2.22□□□□□ -2.05
LINC00643-204ENST00000555934 Q6AWC8 147 aa2.22□□□□□ -2.05
LINC00643-204ENST00000555934 DPPA3Q6W0C5 159 aa2.22□□□□□ -2.05
LINC00643-204ENST00000555934 OR4X2Q8NGF9 303 aa2.22□□□□□ -2.05
LINC00643-204ENST00000555934 IMMP2LQ96T52 175 aa2.22□□□□□ -2.05
LINC00643-204ENST00000555934 DPY30Q9C005 99 aa2.22□□□□□ -2.05
LINC00643-204ENST00000555934 RPL26L1Q9UNX3 145 aaKnown RBP2.22□□□□□ -2.05
LINC00643-204ENST00000555934 MYH6P13533 1939 aa2.22□□□□□ -2.05
LINC00643-204ENST00000555934 ADGRB1O14514 1584 aa2.22□□□□□ -2.05
LINC00643-204ENST00000555934 GLI3P10071 1580 aa2.22□□□□□ -2.05
LINC00643-204ENST00000555934 FRMPD1Q5SYB0 1578 aa2.22□□□□□ -2.05
LINC00643-204ENST00000555934 SETBP1Q9Y6X0 1596 aa2.22□□□□□ -2.05
LINC00643-204ENST00000555934 SPHKAPQ2M3C7 1700 aa2.22□□□□□ -2.05
LINC00643-204ENST00000555934 ARHGEF28Q8N1W1 1705 aaKnown RBP2.22□□□□□ -2.05
LINC00643-204ENST00000555934 ABCC1P33527 1531 aa2.22□□□□□ -2.05
LINC00643-204ENST00000555934 MYOM1P52179 1685 aa2.22□□□□□ -2.05
LINC00643-204ENST00000555934 KIF13AQ9H1H9 1805 aa2.21□□□□□ -2.05
LINC00643-204ENST00000555934 MYH9P35579 1960 aaKnown RBP2.21□□□□□ -2.05
LINC00643-204ENST00000555934 TRGV5A0A0B4J1U4 118 aa2.21□□□□□ -2.06
LINC00643-204ENST00000555934 IGHV3-15A0A0B4J1V0 119 aa2.21□□□□□ -2.06
LINC00643-204ENST00000555934 A0A1W2PQD3 144 aa2.21□□□□□ -2.06
LINC00643-204ENST00000555934 A0A1W2PRS3 328 aa2.21□□□□□ -2.06
LINC00643-204ENST00000555934 MCRIP1C9JLW8 97 aa2.21□□□□□ -2.06
LINC00643-204ENST00000555934 ADGRB2O60241 1585 aa2.21□□□□□ -2.06
LINC00643-204ENST00000555934 CREBL2O60519 120 aaPredicted RBP2.21□□□□□ -2.06
LINC00643-204ENST00000555934 YPEL1O60688 119 aa2.21□□□□□ -2.06
LINC00643-204ENST00000555934 TIMM17BO60830 172 aa2.21□□□□□ -2.06
LINC00643-204ENST00000555934 TRACP01848 142 aa2.21□□□□□ -2.06
LINC00643-204ENST00000555934 ZNF705BP0CI00 300 aaPredicted RBP2.21□□□□□ -2.06
LINC00643-204ENST00000555934 CRYGAP11844 174 aa2.21□□□□□ -2.06
LINC00643-204ENST00000555934 SLC25A4P12235 298 aa2.21□□□□□ -2.06
LINC00643-204ENST00000555934 CCL4P13236 92 aa2.21□□□□□ -2.06
LINC00643-204ENST00000555934 NFYAP23511 347 aaPredicted RBP2.21□□□□□ -2.06
LINC00643-204ENST00000555934 RPL28P46779 137 aaKnown RBP2.21□□□□□ -2.06
LINC00643-204ENST00000555934 HINT1P49773 126 aaPredicted RBP2.21□□□□□ -2.06
LINC00643-204ENST00000555934 OR5AS1Q8N127 324 aa2.21□□□□□ -2.06
LINC00643-204ENST00000555934 Q8N2B8 174 aa2.21□□□□□ -2.06
LINC00643-204ENST00000555934 OTOSQ8NHW6 89 aa2.21□□□□□ -2.06
LINC00643-204ENST00000555934 AQP3Q92482 292 aa2.21□□□□□ -2.06
LINC00643-204ENST00000555934 RAB37Q96AX2 223 aa2.21□□□□□ -2.06
LINC00643-204ENST00000555934 MRPS24Q96EL2 167 aaKnown RBP2.21□□□□□ -2.06
LINC00643-204ENST00000555934 AQP10Q96PS8 301 aa2.21□□□□□ -2.06
LINC00643-204ENST00000555934 VAMP8Q9BV40 100 aa2.21□□□□□ -2.06
LINC00643-204ENST00000555934 CXCL16Q9H2A7 254 aa2.21□□□□□ -2.06
LINC00643-204ENST00000555934 BCL2L10Q9HD36 194 aa2.21□□□□□ -2.06
LINC00643-204ENST00000555934 TET3O43151 1660 aa2.21□□□□□ -2.06
LINC00643-204ENST00000555934 PPRC1Q5VV67 1664 aaKnown RBP2.21□□□□□ -2.06
LINC00643-204ENST00000555934 SYCP2Q9BX26 1530 aa2.21□□□□□ -2.06
LINC00643-204ENST00000555934 OTOGLQ3ZCN5 2332 aa2.2□□□□□ -2.06
LINC00643-204ENST00000555934 SORL1Q92673 2214 aa2.2□□□□□ -2.06
LINC00643-204ENST00000555934 LOC107986453A0A1B0GWG9 222 aa2.2□□□□□ -2.06
LINC00643-204ENST00000555934 OOSP1A8MZH6 123 aa2.2□□□□□ -2.06
LINC00643-204ENST00000555934 TMEM262E9PQX1 116 aa2.2□□□□□ -2.06
LINC00643-204ENST00000555934 M0R2P5 195 aa2.2□□□□□ -2.06
LINC00643-204ENST00000555934 GNRH2O43555 120 aa2.2□□□□□ -2.06
LINC00643-204ENST00000555934 ZNF737O75373 536 aa2.2□□□□□ -2.06
LINC00643-204ENST00000555934 HYPMO75409 117 aa2.2□□□□□ -2.06
LINC00643-204ENST00000555934 SAA1P0DJI8 122 aaPredicted RBP2.2□□□□□ -2.06
LINC00643-204ENST00000555934 CD24P25063 80 aa2.2□□□□□ -2.06
LINC00643-204ENST00000555934 CIRBPQ14011 172 aaKnown RBP2.2□□□□□ -2.06
LINC00643-204ENST00000555934 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
LINC00643-204ENST00000555934 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.2□□□□□ -2.06
LINC00643-204ENST00000555934 MIC13Q5XKP0 118 aa2.2□□□□□ -2.06
LINC00643-204ENST00000555934 DYNAPQ8N1N2 210 aa2.2□□□□□ -2.06
LINC00643-204ENST00000555934 CCL4L1Q8NHW4 92 aa2.2□□□□□ -2.06
LINC00643-204ENST00000555934 CLEC2BQ92478 149 aa2.2□□□□□ -2.06
LINC00643-204ENST00000555934 LSM10Q969L4 123 aaKnown RBP2.2□□□□□ -2.06
LINC00643-204ENST00000555934 CHCHD1Q96BP2 118 aaKnown RBP2.2□□□□□ -2.06
LINC00643-204ENST00000555934 TAS2R4Q9NYW5 299 aa2.2□□□□□ -2.06
LINC00643-204ENST00000555934 AP4S1Q9Y587 144 aa2.2□□□□□ -2.06
LINC00643-204ENST00000555934 CDC42BPGQ6DT37 1551 aa2.19□□□□□ -2.06
LINC00643-204ENST00000555934 EFCAB6Q5THR3 1501 aa2.19□□□□□ -2.06
LINC00643-204ENST00000555934 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.19□□□□□ -2.06
LINC00643-204ENST00000555934 SMIM31A0A1B0GVY4 71 aa2.19□□□□□ -2.06
LINC00643-204ENST00000555934 ZNF736B4DX44 427 aaPredicted RBP2.19□□□□□ -2.06
LINC00643-204ENST00000555934 LINC00032P0C843 101 aa2.19□□□□□ -2.06
LINC00643-204ENST00000555934 IGLC1P0CG04 106 aa2.19□□□□□ -2.06
LINC00643-204ENST00000555934 COX6A1P12074 109 aa2.19□□□□□ -2.06
LINC00643-204ENST00000555934 C6orf52Q5T4I8 152 aa2.19□□□□□ -2.06
LINC00643-204ENST00000555934 OR2T2Q6IF00 324 aa2.19□□□□□ -2.06
LINC00643-204ENST00000555934 Q6ZS92 163 aa2.19□□□□□ -2.06
LINC00643-204ENST00000555934 OR5AK2Q8NH90 309 aa2.19□□□□□ -2.06
LINC00643-204ENST00000555934 RETNLBQ9BQ08 111 aa2.19□□□□□ -2.06
LINC00643-204ENST00000555934 LINC00467Q9BRT7 94 aa2.19□□□□□ -2.06
LINC00643-204ENST00000555934 TPRKBQ9Y3C4 175 aa2.19□□□□□ -2.06
LINC00643-204ENST00000555934 NYNRINQ9P2P1 1898 aaKnown RBP2.19□□□□□ -2.06
LINC00643-204ENST00000555934 ABCA6Q8N139 1617 aa2.19□□□□□ -2.06
LINC00643-204ENST00000555934 MAP3K4Q9Y6R4 1608 aa2.19□□□□□ -2.06
LINC00643-204ENST00000555934 SCN9AQ15858 1988 aa2.19□□□□□ -2.06
LINC00643-204ENST00000555934 MYO5CQ9NQX4 1742 aa2.19□□□□□ -2.06
LINC00643-204ENST00000555934 IFT172Q9UG01 1749 aa2.19□□□□□ -2.06
LINC00643-204ENST00000555934 RIC1Q4ADV7 1423 aa2.18□□□□□ -2.06
LINC00643-204ENST00000555934 ARHGAP5Q13017 1502 aa2.18□□□□□ -2.06
LINC00643-204ENST00000555934 ABCA9Q8IUA7 1624 aa2.18□□□□□ -2.06
LINC00643-204ENST00000555934 MROH1Q8NDA8 1641 aa2.18□□□□□ -2.06
LINC00643-204ENST00000555934 LYRM1O43325 122 aa2.18□□□□□ -2.06
LINC00643-204ENST00000555934 EDF1O60869 148 aaKnown RBP2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms