RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 FAM231BA6NCW3 169 aa10.51□□□□□ -0.73
SHOX2-206ENST00000554685 CXorf65A6NEN9 183 aa10.51□□□□□ -0.73
SHOX2-206ENST00000554685 S100PP25815 95 aa10.51□□□□□ -0.73
SHOX2-206ENST00000554685 TDRG1Q3Y452 100 aa10.51□□□□□ -0.73
SHOX2-206ENST00000554685 KCNIP4Q6PIL6 250 aa10.51□□□□□ -0.73
SHOX2-206ENST00000554685 IMMP2LQ96T52 175 aa10.51□□□□□ -0.73
SHOX2-206ENST00000554685 LINC00467Q9BRT7 94 aa10.51□□□□□ -0.73
SHOX2-206ENST00000554685 GFRA4Q9GZZ7 299 aa10.51□□□□□ -0.73
SHOX2-206ENST00000554685 IGHV1OR15-1A0A075B7D0 117 aa10.5□□□□□ -0.73
SHOX2-206ENST00000554685 ATRAIDQ6UW56 229 aa10.5□□□□□ -0.73
SHOX2-206ENST00000554685 TSKUQ8WUA8 353 aa10.5□□□□□ -0.73
SHOX2-206ENST00000554685 LINC01587Q99440 93 aa10.5□□□□□ -0.73
SHOX2-206ENST00000554685 SMCO4Q9NRQ5 59 aa10.5□□□□□ -0.73
SHOX2-206ENST00000554685 IL36BQ9NZH7 164 aa10.5□□□□□ -0.73
SHOX2-206ENST00000554685 TRGV11A0A075B6L2 103 aa10.49□□□□□ -0.73
SHOX2-206ENST00000554685 A0A1W2PPQ1 181 aa10.49□□□□□ -0.73
SHOX2-206ENST00000554685 LCE2BO14633 110 aa10.49□□□□□ -0.73
SHOX2-206ENST00000554685 RPL19P84098 196 aaKnown RBP10.49□□□□□ -0.73
SHOX2-206ENST00000554685 ANXA2RQ3ZCQ2 193 aa10.49□□□□□ -0.73
SHOX2-206ENST00000554685 MUC21Q5SSG8 566 aa10.49□□□□□ -0.73
SHOX2-206ENST00000554685 C11orf21Q9P2W6 132 aa10.49□□□□□ -0.73
SHOX2-206ENST00000554685 AGRNO00468 2067 aa10.48□□□□□ -0.73
SHOX2-206ENST00000554685 TMSB15BA0A087X1C1 80 aa10.48□□□□□ -0.73
SHOX2-206ENST00000554685 IGKV3D-20A0A0C4DH25 116 aa10.48□□□□□ -0.73
SHOX2-206ENST00000554685 SMIM27A0A1W2PRY6 76 aa10.48□□□□□ -0.73
SHOX2-206ENST00000554685 GIG44P09565 113 aaPredicted RBP10.48□□□□□ -0.73
SHOX2-206ENST00000554685 S100A4P26447 101 aaKnown RBP10.48□□□□□ -0.73
SHOX2-206ENST00000554685 ASIPP42127 132 aa10.48□□□□□ -0.73
SHOX2-206ENST00000554685 BTF3L4Q96K17 158 aa10.48□□□□□ -0.73
SHOX2-206ENST00000554685 NAT8BQ9UHF3 227 aa10.48□□□□□ -0.73
SHOX2-206ENST00000554685 TRAV9-1A0A075B6T8 112 aa10.47□□□□□ -0.73
SHOX2-206ENST00000554685 CBY3A6NI87 242 aa10.47□□□□□ -0.73
SHOX2-206ENST00000554685 RBMY1A1P0DJD3 496 aaKnown RBP10.47□□□□□ -0.73
SHOX2-206ENST00000554685 RBMY1CP0DJD4 496 aa10.47□□□□□ -0.73
SHOX2-206ENST00000554685 MED14OSP0DP75 135 aa10.47□□□□□ -0.73
SHOX2-206ENST00000554685 RBMY1FQ15415 496 aaKnown RBP10.47□□□□□ -0.73
SHOX2-206ENST00000554685 DNLZQ5SXM8 178 aa10.47□□□□□ -0.73
SHOX2-206ENST00000554685 C1orf158Q8N1D5 194 aa10.47□□□□□ -0.73
SHOX2-206ENST00000554685 CSNK1G2-AS1Q8NCQ2 148 aa10.47□□□□□ -0.73
SHOX2-206ENST00000554685 BORCS7Q96B45 105 aa10.47□□□□□ -0.73
SHOX2-206ENST00000554685 NEU1Q99519 415 aa10.47□□□□□ -0.73
SHOX2-206ENST00000554685 PKD1L1Q8TDX9 2849 aa10.46□□□□□ -0.73
SHOX2-206ENST00000554685 TYMSP04818 313 aa10.46□□□□□ -0.73
SHOX2-206ENST00000554685 FRMD6-AS1P0C7T7 363 aa10.46□□□□□ -0.73
SHOX2-206ENST00000554685 ZNF705AQ6ZN79 300 aaPredicted RBP10.46□□□□□ -0.73
SHOX2-206ENST00000554685 Q6ZQT7 251 aa10.46□□□□□ -0.73
SHOX2-206ENST00000554685 Q6ZWC4 215 aa10.46□□□□□ -0.73
SHOX2-206ENST00000554685 FER1L6-AS1Q8NA97 138 aa10.46□□□□□ -0.73
SHOX2-206ENST00000554685 CMYA5Q8N3K9 4069 aa10.45□□□□□ -0.74
SHOX2-206ENST00000554685 IGHV3OR16-12A0A075B7B8 117 aa10.45□□□□□ -0.74
SHOX2-206ENST00000554685 GRIFINA4D1Z8 144 aa10.45□□□□□ -0.74
SHOX2-206ENST00000554685 HIGD1CA8MV81 97 aa10.45□□□□□ -0.74
SHOX2-206ENST00000554685 F2Z2F3 143 aa10.45□□□□□ -0.74
SHOX2-206ENST00000554685 SMCPP49901 116 aaPredicted RBP10.45□□□□□ -0.74
SHOX2-206ENST00000554685 FOXA3P55318 350 aaPredicted RBP10.45□□□□□ -0.74
SHOX2-206ENST00000554685 RCHY1Q96PM5 261 aa10.45□□□□□ -0.74
SHOX2-206ENST00000554685 PGPEP1Q9NXJ5 209 aa10.45□□□□□ -0.74
SHOX2-206ENST00000554685 SMIM9A6NGZ8 99 aa10.44□□□□□ -0.74
SHOX2-206ENST00000554685 K7EIL1 84 aa10.44□□□□□ -0.74
SHOX2-206ENST00000554685 OR5AL1P0C617 328 aa10.44□□□□□ -0.74
SHOX2-206ENST00000554685 IGLC6P0CF74 106 aa10.44□□□□□ -0.74
SHOX2-206ENST00000554685 GZMBP10144 247 aa10.44□□□□□ -0.74
SHOX2-206ENST00000554685 CTRLP40313 264 aa10.44□□□□□ -0.74
SHOX2-206ENST00000554685 TCL1AP56279 114 aa10.44□□□□□ -0.74
SHOX2-206ENST00000554685 ZNF415Q09FC8 603 aa10.44□□□□□ -0.74
SHOX2-206ENST00000554685 RRN3P1Q2M238 152 aa10.44□□□□□ -0.74
SHOX2-206ENST00000554685 TMEM88Q6PEY1 159 aa10.44□□□□□ -0.74
SHOX2-206ENST00000554685 ZNF493Q6ZR52 646 aa10.44□□□□□ -0.74
SHOX2-206ENST00000554685 CBLN2Q8IUK8 224 aa10.44□□□□□ -0.74
SHOX2-206ENST00000554685 TP53TG1Q9Y2A0 90 aa10.44□□□□□ -0.74
SHOX2-206ENST00000554685 IGHV3-16A0A0C4DH30 117 aa10.43□□□□□ -0.74
SHOX2-206ENST00000554685 GNRH2O43555 120 aa10.43□□□□□ -0.74
SHOX2-206ENST00000554685 SNAI2O43623 268 aa10.43□□□□□ -0.74
SHOX2-206ENST00000554685 HTN1P15515 57 aa10.43□□□□□ -0.74
SHOX2-206ENST00000554685 WDR73Q6P4I2 378 aa10.43□□□□□ -0.74
SHOX2-206ENST00000554685 NUP35Q8NFH5 326 aa10.43□□□□□ -0.74
SHOX2-206ENST00000554685 TMEM263Q8WUH6 116 aaKnown RBP10.43□□□□□ -0.74
SHOX2-206ENST00000554685 GTSF1Q8WW33 167 aa10.43□□□□□ -0.74
SHOX2-206ENST00000554685 C16orf74Q96GX8 76 aa10.43□□□□□ -0.74
SHOX2-206ENST00000554685 TPPP3Q9BW30 176 aa10.43□□□□□ -0.74
SHOX2-206ENST00000554685 URGCP-MRPS24S4R325 110 aa10.43□□□□□ -0.74
SHOX2-206ENST00000554685 H3BVH4 76 aa10.42□□□□□ -0.74
SHOX2-206ENST00000554685 SCO1O75880 301 aa10.42□□□□□ -0.74
SHOX2-206ENST00000554685 ARMS2P0C7Q2 107 aa10.42□□□□□ -0.74
SHOX2-206ENST00000554685 FAM3BP58499 235 aaPredicted RBP10.42□□□□□ -0.74
SHOX2-206ENST00000554685 CACNG7P62955 275 aa10.42□□□□□ -0.74
SHOX2-206ENST00000554685 RIGQ13278 110 aa10.42□□□□□ -0.74
SHOX2-206ENST00000554685 DEFB135Q30KP9 77 aa10.42□□□□□ -0.74
SHOX2-206ENST00000554685 LYZL1Q6UWQ5 148 aa10.42□□□□□ -0.74
SHOX2-206ENST00000554685 ATP5L2Q7Z4Y8 100 aa10.42□□□□□ -0.74
SHOX2-206ENST00000554685 RNF183Q96D59 192 aa10.42□□□□□ -0.74
SHOX2-206ENST00000554685 PGLYRP4Q96LB8 373 aa10.42□□□□□ -0.74
SHOX2-206ENST00000554685 SSBP4Q9BWG4 385 aaPredicted RBP10.42□□□□□ -0.74
SHOX2-206ENST00000554685 TP53TG3Q9ULZ0 132 aa10.42□□□□□ -0.74
SHOX2-206ENST00000554685 TRBV24-1A0A075B6N3 115 aa10.41□□□□□ -0.74
SHOX2-206ENST00000554685 A0A1B0GUT8 65 aa10.41□□□□□ -0.74
SHOX2-206ENST00000554685 A0A1B0GW15 77 aa10.41□□□□□ -0.74
SHOX2-206ENST00000554685 SPRY2O43597 315 aa10.41□□□□□ -0.74
SHOX2-206ENST00000554685 PRB2P02812 416 aaPredicted RBP10.41□□□□□ -0.74
SHOX2-206ENST00000554685 S100A8P05109 93 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms