RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 KIR2DL5BQ8NHK3 375 aa7.8□□□□□ -1.16
DDB1-221ENST00000543162 TMEM208Q9BTX3 173 aa7.8□□□□□ -1.16
DDB1-221ENST00000543162 IL36BQ9NZH7 164 aa7.8□□□□□ -1.16
DDB1-221ENST00000543162 IGHV1OR15-1A0A075B7D0 117 aa7.79□□□□□ -1.16
DDB1-221ENST00000543162 IGKV3D-20A0A0C4DH25 116 aa7.79□□□□□ -1.16
DDB1-221ENST00000543162 A8MZ25 164 aa7.79□□□□□ -1.16
DDB1-221ENST00000543162 SCO1O75880 301 aa7.79□□□□□ -1.16
DDB1-221ENST00000543162 S100PP25815 95 aa7.79□□□□□ -1.16
DDB1-221ENST00000543162 TMEM88Q6PEY1 159 aa7.79□□□□□ -1.16
DDB1-221ENST00000543162 TMEM256Q8N2U0 113 aa7.79□□□□□ -1.16
DDB1-221ENST00000543162 TSKUQ8WUA8 353 aa7.79□□□□□ -1.16
DDB1-221ENST00000543162 KCNS1Q96KK3 526 aa7.79□□□□□ -1.16
DDB1-221ENST00000543162 LINC01587Q99440 93 aa7.79□□□□□ -1.16
DDB1-221ENST00000543162 PYGO2Q9BRQ0 406 aa7.79□□□□□ -1.16
DDB1-221ENST00000543162 SMCO4Q9NRQ5 59 aa7.79□□□□□ -1.16
DDB1-221ENST00000543162 GOLT1BQ9Y3E0 138 aa7.79□□□□□ -1.16
DDB1-221ENST00000543162 IGHV3OR16-12A0A075B7B8 117 aa7.78□□□□□ -1.16
DDB1-221ENST00000543162 SMIM27A0A1W2PRY6 76 aa7.78□□□□□ -1.16
DDB1-221ENST00000543162 GRIFINA4D1Z8 144 aa7.78□□□□□ -1.16
DDB1-221ENST00000543162 CXorf65A6NEN9 183 aa7.78□□□□□ -1.16
DDB1-221ENST00000543162 UBE2CO00762 179 aa7.78□□□□□ -1.16
DDB1-221ENST00000543162 PRB2P02812 416 aaPredicted RBP7.78□□□□□ -1.16
DDB1-221ENST00000543162 GZMBP10144 247 aa7.78□□□□□ -1.16
DDB1-221ENST00000543162 TCL1AP56279 114 aa7.78□□□□□ -1.16
DDB1-221ENST00000543162 TDRG1Q3Y452 100 aa7.78□□□□□ -1.16
DDB1-221ENST00000543162 KCNIP4Q6PIL6 250 aa7.78□□□□□ -1.16
DDB1-221ENST00000543162 CBLN2Q8IUK8 224 aa7.78□□□□□ -1.16
DDB1-221ENST00000543162 C1orf158Q8N1D5 194 aa7.78□□□□□ -1.16
DDB1-221ENST00000543162 IMMP2LQ96T52 175 aa7.78□□□□□ -1.16
DDB1-221ENST00000543162 FAM231BA6NCW3 169 aa7.77□□□□□ -1.17
DDB1-221ENST00000543162 CBY3A6NI87 242 aa7.77□□□□□ -1.17
DDB1-221ENST00000543162 GNRH2O43555 120 aa7.77□□□□□ -1.17
DDB1-221ENST00000543162 CXCL1P09341 107 aa7.77□□□□□ -1.17
DDB1-221ENST00000543162 HTN1P15515 57 aa7.77□□□□□ -1.17
DDB1-221ENST00000543162 ASIPP42127 132 aa7.77□□□□□ -1.17
DDB1-221ENST00000543162 CSNK1G2-AS1Q8NCQ2 148 aa7.77□□□□□ -1.17
DDB1-221ENST00000543162 NEU1Q99519 415 aa7.77□□□□□ -1.17
DDB1-221ENST00000543162 LINC00467Q9BRT7 94 aa7.77□□□□□ -1.17
DDB1-221ENST00000543162 TPPP3Q9BW30 176 aa7.77□□□□□ -1.17
DDB1-221ENST00000543162 GFRA4Q9GZZ7 299 aa7.77□□□□□ -1.17
DDB1-221ENST00000543162 NAT8BQ9UHF3 227 aa7.77□□□□□ -1.17
DDB1-221ENST00000543162 URGCP-MRPS24S4R325 110 aa7.77□□□□□ -1.17
DDB1-221ENST00000543162 NBEAL1Q6ZS30 2694 aa7.77□□□□□ -1.17
DDB1-221ENST00000543162 TRGV11A0A075B6L2 103 aa7.76□□□□□ -1.17
DDB1-221ENST00000543162 A0A1W2PPQ1 181 aa7.76□□□□□ -1.17
DDB1-221ENST00000543162 HIGD1CA8MV81 97 aa7.76□□□□□ -1.17
DDB1-221ENST00000543162 TYMSP04818 313 aa7.76□□□□□ -1.17
DDB1-221ENST00000543162 FRMD6-AS1P0C7T7 363 aa7.76□□□□□ -1.17
DDB1-221ENST00000543162 S100A4P26447 101 aaKnown RBP7.76□□□□□ -1.17
DDB1-221ENST00000543162 FAM3BP58499 235 aaPredicted RBP7.76□□□□□ -1.17
DDB1-221ENST00000543162 ZNF575Q86XF7 245 aa7.76□□□□□ -1.17
DDB1-221ENST00000543162 FER1L6-AS1Q8NA97 138 aa7.76□□□□□ -1.17
DDB1-221ENST00000543162 GTSF1Q8WW33 167 aa7.76□□□□□ -1.17
DDB1-221ENST00000543162 PGLYRP4Q96LB8 373 aa7.76□□□□□ -1.17
DDB1-221ENST00000543162 TP53TG3Q9ULZ0 132 aa7.76□□□□□ -1.17
DDB1-221ENST00000543162 H3BVH4 76 aa7.75□□□□□ -1.17
DDB1-221ENST00000543162 K7EIL1 84 aa7.75□□□□□ -1.17
DDB1-221ENST00000543162 IGLC6P0CF74 106 aa7.75□□□□□ -1.17
DDB1-221ENST00000543162 FOXA3P55318 350 aaPredicted RBP7.75□□□□□ -1.17
DDB1-221ENST00000543162 DEFB135Q30KP9 77 aa7.75□□□□□ -1.17
DDB1-221ENST00000543162 DNLZQ5SXM8 178 aa7.75□□□□□ -1.17
DDB1-221ENST00000543162 ZNF705AQ6ZN79 300 aaPredicted RBP7.75□□□□□ -1.17
DDB1-221ENST00000543162 NUP35Q8NFH5 326 aa7.75□□□□□ -1.17
DDB1-221ENST00000543162 TIMM8BQ9Y5J9 83 aaPredicted RBP7.75□□□□□ -1.17
DDB1-221ENST00000543162 TRAV9-1A0A075B6T8 112 aa7.74□□□□□ -1.17
DDB1-221ENST00000543162 IGHV3-16A0A0C4DH30 117 aa7.74□□□□□ -1.17
DDB1-221ENST00000543162 F2Z2F3 143 aa7.74□□□□□ -1.17
DDB1-221ENST00000543162 PRM2P04554 102 aa7.74□□□□□ -1.17
DDB1-221ENST00000543162 ARMS2P0C7Q2 107 aa7.74□□□□□ -1.17
DDB1-221ENST00000543162 MED14OSP0DP75 135 aa7.74□□□□□ -1.17
DDB1-221ENST00000543162 CTRLP40313 264 aa7.74□□□□□ -1.17
DDB1-221ENST00000543162 ELOBQ15370 118 aa7.74□□□□□ -1.17
DDB1-221ENST00000543162 DEFB121Q5J5C9 76 aa7.74□□□□□ -1.17
DDB1-221ENST00000543162 LYZL1Q6UWQ5 148 aa7.74□□□□□ -1.17
DDB1-221ENST00000543162 Q6ZWC4 215 aa7.74□□□□□ -1.17
DDB1-221ENST00000543162 BORCS7Q96B45 105 aa7.74□□□□□ -1.17
DDB1-221ENST00000543162 BTF3L4Q96K17 158 aa7.74□□□□□ -1.17
DDB1-221ENST00000543162 RCHY1Q96PM5 261 aa7.74□□□□□ -1.17
DDB1-221ENST00000543162 A0A1B0GUT8 65 aa7.73□□□□□ -1.17
DDB1-221ENST00000543162 SPINK4O60575 86 aa7.73□□□□□ -1.17
DDB1-221ENST00000543162 OR5AL1P0C617 328 aa7.73□□□□□ -1.17
DDB1-221ENST00000543162 RNASE3P12724 160 aaKnown RBP7.73□□□□□ -1.17
DDB1-221ENST00000543162 ZNF415Q09FC8 603 aa7.73□□□□□ -1.17
DDB1-221ENST00000543162 RRN3P1Q2M238 152 aa7.73□□□□□ -1.17
DDB1-221ENST00000543162 YPEL4Q96NS1 127 aa7.73□□□□□ -1.17
DDB1-221ENST00000543162 SSBP4Q9BWG4 385 aaPredicted RBP7.73□□□□□ -1.17
DDB1-221ENST00000543162 MDFICQ9P1T7 246 aa7.73□□□□□ -1.17
DDB1-221ENST00000543162 TRBV24-1A0A075B6N3 115 aa7.72□□□□□ -1.17
DDB1-221ENST00000543162 TGIF2-C20orf24A0A0A6YYL0 155 aa7.72□□□□□ -1.17
DDB1-221ENST00000543162 MUC21A0A0G2JKD1 596 aa7.72□□□□□ -1.17
DDB1-221ENST00000543162 MUC21A0A140T8X8 626 aa7.72□□□□□ -1.17
DDB1-221ENST00000543162 SMIM9A6NGZ8 99 aa7.72□□□□□ -1.17
DDB1-221ENST00000543162 SPRY2O43597 315 aa7.72□□□□□ -1.17
DDB1-221ENST00000543162 SNAI2O43623 268 aa7.72□□□□□ -1.17
DDB1-221ENST00000543162 AZU1P20160 251 aa7.72□□□□□ -1.17
DDB1-221ENST00000543162 SSTP61278 116 aa7.72□□□□□ -1.17
DDB1-221ENST00000543162 RIGQ13278 110 aa7.72□□□□□ -1.17
DDB1-221ENST00000543162 SPANXN1Q5VSR9 72 aa7.72□□□□□ -1.17
DDB1-221ENST00000543162 MRPL54Q6P161 138 aaKnown RBP7.72□□□□□ -1.17
DDB1-221ENST00000543162 ZNF493Q6ZR52 646 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms