RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 CASP8AP2Q9UKL3 1982 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 LCTP09848 1927 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 PLXNB3Q9ULL4 1909 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 FANCMQ8IYD8 2048 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 DOCK3Q8IZD9 2030 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 BPTFQ12830 3046 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 IGKV6-21A0A0C4DH24 114 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 UBE2L5PA0A1B0GUS4 154 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 WI2-2373I1.2A0A1W2PRP0 233 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 PLAC8L1A1L4L8 177 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 HMGN4O00479 90 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 CCL22O00626 93 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 PIN1P1O15428 100 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 NDUFB3O43676 98 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 NDUFS5O43920 106 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 NPYP01303 97 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 IL4P05112 153 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 SSR2P43308 183 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 NCBP2P52298 156 aaKnown RBP eCLIP2.18□□□□□ -2.06
USP28-210ENST00000542033 DSCR4P56555 118 aaPredicted RBP2.18□□□□□ -2.06
USP28-210ENST00000542033 UBE2D3P61077 147 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 DAD1P61803 113 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 UBE2D2P62837 147 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 SUPT4H1P63272 117 aaKnown RBP2.18□□□□□ -2.06
USP28-210ENST00000542033 REG3AQ06141 175 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 DEFB121Q5J5C9 76 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 C1orf140Q5VVS0 124 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 LINC00305Q7Z4B0 112 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 ATP5L2Q7Z4Y8 100 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 C5orf38Q86SI9 138 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 LINC00643Q86TS7 51 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 PDPNQ86YL7 162 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 SERP2Q8N6R1 65 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 DCAF4L2Q8NA75 395 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 LY6G5BQ8NDX9 201 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 BRK1Q8WUW1 75 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 ZC2HC1AQ96GY0 325 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 IGF2BP2-AS1Q96M15 143 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 ODF3Q96PU9 254 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 CHAC1Q9BUX1 264 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 C11orf1Q9H5F2 150 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 OSTCQ9NRP0 149 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 F11RQ9Y624 299 aaKnown RBP2.18□□□□□ -2.06
USP28-210ENST00000542033 ANAPC1Q9H1A4 1944 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 PLXNA1Q9UIW2 1896 aa2.18□□□□□ -2.06
USP28-210ENST00000542033 TRAV8-1A0A0A6YYK1 113 aa2.17□□□□□ -2.06
USP28-210ENST00000542033 IGLV1-36A0A0B4J1U3 117 aa2.17□□□□□ -2.06
USP28-210ENST00000542033 MYMXA0A1B0GTQ4 84 aa2.17□□□□□ -2.06
USP28-210ENST00000542033 CTXND1A0A1B0GTU2 59 aa2.17□□□□□ -2.06
USP28-210ENST00000542033 TCRBV4S1A1TA0A5B7 111 aa2.17□□□□□ -2.06
USP28-210ENST00000542033 PGPA6NDG6 321 aa2.17□□□□□ -2.06
USP28-210ENST00000542033 CRYM-AS1A6NIL9 109 aa2.17□□□□□ -2.06
USP28-210ENST00000542033 UPK2O00526 184 aa2.17□□□□□ -2.06
USP28-210ENST00000542033 SYNGR2O43760 224 aa2.17□□□□□ -2.06
USP28-210ENST00000542033 BCE1O60756 84 aa2.17□□□□□ -2.06
USP28-210ENST00000542033 TCL1BO95988 128 aa2.17□□□□□ -2.06
USP28-210ENST00000542033 IGLV3-25P01717 112 aa2.17□□□□□ -2.06
USP28-210ENST00000542033 GCHFRP30047 84 aa2.17□□□□□ -2.06
USP28-210ENST00000542033 HERVK_113P61574 105 aa2.17□□□□□ -2.06
USP28-210ENST00000542033 ERCC8Q13216 396 aa2.17□□□□□ -2.06
USP28-210ENST00000542033 RSPO1Q2MKA7 263 aaPredicted RBP2.17□□□□□ -2.06
USP28-210ENST00000542033 Q6ZQT7 251 aa2.17□□□□□ -2.06
USP28-210ENST00000542033 ZCCHC24Q8N2G6 241 aaKnown RBP2.17□□□□□ -2.06
USP28-210ENST00000542033 FAM19A2Q8N3H0 131 aa2.17□□□□□ -2.06
USP28-210ENST00000542033 SLC22A24Q8N4F4 322 aa2.17□□□□□ -2.06
USP28-210ENST00000542033 LINC01555Q8NAE3 123 aa2.17□□□□□ -2.06
USP28-210ENST00000542033 IFI27L1Q96BM0 104 aa2.17□□□□□ -2.06
USP28-210ENST00000542033 C18orf15Q96N68 181 aa2.17□□□□□ -2.06
USP28-210ENST00000542033 TM2D3Q9BRN9 247 aa2.17□□□□□ -2.06
USP28-210ENST00000542033 UPK3BQ9BT76 320 aa2.17□□□□□ -2.06
USP28-210ENST00000542033 LINC00527Q9UJ94 153 aa2.17□□□□□ -2.06
USP28-210ENST00000542033 HILPDAQ9Y5L2 63 aa2.17□□□□□ -2.06
USP28-210ENST00000542033 PAPPA2Q9BXP8 1791 aa2.17□□□□□ -2.06
USP28-210ENST00000542033 UBR3Q6ZT12 1888 aa2.17□□□□□ -2.06
USP28-210ENST00000542033 VWA8A3KMH1 1905 aa2.17□□□□□ -2.06
USP28-210ENST00000542033 PTPRDP23468 1912 aa2.17□□□□□ -2.06
USP28-210ENST00000542033 IGHV3OR15-7A0A075B7D8 119 aa2.16□□□□□ -2.06
USP28-210ENST00000542033 SMIM27A0A1W2PRY6 76 aa2.16□□□□□ -2.06
USP28-210ENST00000542033 CCL16O15467 120 aa2.16□□□□□ -2.06
USP28-210ENST00000542033 NDUFC1O43677 76 aa2.16□□□□□ -2.06
USP28-210ENST00000542033 PPYP01298 95 aa2.16□□□□□ -2.06
USP28-210ENST00000542033 INSP01308 110 aa2.16□□□□□ -2.06
USP28-210ENST00000542033 TCRAP04437 139 aa2.16□□□□□ -2.06
USP28-210ENST00000542033 IGHV4-34P06331 123 aa2.16□□□□□ -2.06
USP28-210ENST00000542033 PIRTP0C851 137 aa2.16□□□□□ -2.06
USP28-210ENST00000542033 HMGA1P17096 107 aaKnown RBP2.16□□□□□ -2.06
USP28-210ENST00000542033 LGALS3P17931 250 aaKnown RBP2.16□□□□□ -2.06
USP28-210ENST00000542033 CCL1P22362 96 aa2.16□□□□□ -2.06
USP28-210ENST00000542033 ZNF138P52744 262 aa2.16□□□□□ -2.06
USP28-210ENST00000542033 FXYD2P54710 66 aa2.16□□□□□ -2.06
USP28-210ENST00000542033 PRR3P79522 188 aaKnown RBP2.16□□□□□ -2.06
USP28-210ENST00000542033 CST6Q15828 149 aa2.16□□□□□ -2.06
USP28-210ENST00000542033 LYPD2Q6UXB3 125 aa2.16□□□□□ -2.06
USP28-210ENST00000542033 SDIM1Q6ZPB5 146 aa2.16□□□□□ -2.06
USP28-210ENST00000542033 KTN1-AS1Q86SY8 53 aa2.16□□□□□ -2.06
USP28-210ENST00000542033 MARCH3Q86UD3 253 aa2.16□□□□□ -2.06
USP28-210ENST00000542033 OR5C1Q8NGR4 320 aa2.16□□□□□ -2.06
USP28-210ENST00000542033 ZNF799Q96GE5 643 aa2.16□□□□□ -2.06
USP28-210ENST00000542033 DSCR8Q96T75 97 aa2.16□□□□□ -2.06
USP28-210ENST00000542033 DYNLRB1Q9NP97 96 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms