RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.26□□□□□ -1.41
SFXN1-211ENST00000515736 KCNS1Q96KK3 526 aa6.26□□□□□ -1.41
SFXN1-211ENST00000515736 CSTL1Q9H114 145 aa6.26□□□□□ -1.41
SFXN1-211ENST00000515736 ANK3Q12955 4377 aaKnown RBP6.25□□□□□ -1.41
SFXN1-211ENST00000515736 IGLV5-37A0A075B6J1 123 aa6.25□□□□□ -1.41
SFXN1-211ENST00000515736 A0A1B0GUT8 65 aa6.25□□□□□ -1.41
SFXN1-211ENST00000515736 A0A1W2PS18 150 aa6.25□□□□□ -1.41
SFXN1-211ENST00000515736 SERF1AO75920 110 aa6.25□□□□□ -1.41
SFXN1-211ENST00000515736 PMCHP20382 165 aa6.25□□□□□ -1.41
SFXN1-211ENST00000515736 C9orf139Q6ZV77 190 aa6.25□□□□□ -1.41
SFXN1-211ENST00000515736 KRTAP19-1Q8IUB9 90 aa6.25□□□□□ -1.41
SFXN1-211ENST00000515736 SIGLECL1Q8N7X8 197 aa6.25□□□□□ -1.41
SFXN1-211ENST00000515736 OR2D3Q8NGH3 330 aa6.25□□□□□ -1.41
SFXN1-211ENST00000515736 SAMD10Q9BYL1 202 aa6.25□□□□□ -1.41
SFXN1-211ENST00000515736 GNB4Q9HAV0 340 aa6.25□□□□□ -1.41
SFXN1-211ENST00000515736 LENEPQ9Y5L5 61 aa6.25□□□□□ -1.41
SFXN1-211ENST00000515736 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.24□□□□□ -1.41
SFXN1-211ENST00000515736 LOC100996750A0A140TA64 210 aa6.24□□□□□ -1.41
SFXN1-211ENST00000515736 GRIFINA4D1Z8 144 aa6.24□□□□□ -1.41
SFXN1-211ENST00000515736 CHEK1O14757 476 aa6.24□□□□□ -1.41
SFXN1-211ENST00000515736 CA1P00915 261 aaPredicted RBP6.24□□□□□ -1.41
SFXN1-211ENST00000515736 TRGV3P03979 118 aa6.24□□□□□ -1.41
SFXN1-211ENST00000515736 SRIP30626 198 aa6.24□□□□□ -1.41
SFXN1-211ENST00000515736 CTAG1AP78358 180 aa6.24□□□□□ -1.41
SFXN1-211ENST00000515736 SCGB2A2Q13296 93 aa6.24□□□□□ -1.41
SFXN1-211ENST00000515736 NRACQ8N912 160 aa6.24□□□□□ -1.41
SFXN1-211ENST00000515736 C18orf32Q8TCD1 76 aa6.24□□□□□ -1.41
SFXN1-211ENST00000515736 CHCHD1Q96BP2 118 aaKnown RBP6.24□□□□□ -1.41
SFXN1-211ENST00000515736 ZC2HC1AQ96GY0 325 aa6.24□□□□□ -1.41
SFXN1-211ENST00000515736 KRTAP4-6Q9BYQ5 205 aa6.24□□□□□ -1.41
SFXN1-211ENST00000515736 TP53TG3Q9ULZ0 132 aa6.24□□□□□ -1.41
SFXN1-211ENST00000515736 TRAV8-1A0A0A6YYK1 113 aa6.23□□□□□ -1.41
SFXN1-211ENST00000515736 TRBV7-9A0A0J9YWB2 115 aa6.23□□□□□ -1.41
SFXN1-211ENST00000515736 G3V318 75 aa6.23□□□□□ -1.41
SFXN1-211ENST00000515736 H3BTX0 84 aa6.23□□□□□ -1.41
SFXN1-211ENST00000515736 H3BUX3 64 aa6.23□□□□□ -1.41
SFXN1-211ENST00000515736 ZNF324O75467 553 aaPredicted RBP6.23□□□□□ -1.41
SFXN1-211ENST00000515736 GPX1P07203 203 aa6.23□□□□□ -1.41
SFXN1-211ENST00000515736 IGHV4-38-2P0DP08 117 aa6.23□□□□□ -1.41
SFXN1-211ENST00000515736 SLAQ13239 276 aa6.23□□□□□ -1.41
SFXN1-211ENST00000515736 CLEC19AQ6UXS0 136 aa6.23□□□□□ -1.41
SFXN1-211ENST00000515736 BRD3OSQ6XYD6 125 aa6.23□□□□□ -1.41
SFXN1-211ENST00000515736 ZNF493Q6ZR52 646 aa6.23□□□□□ -1.41
SFXN1-211ENST00000515736 MRPL52Q86TS9 123 aaKnown RBP6.23□□□□□ -1.41
SFXN1-211ENST00000515736 TMEM256Q8N2U0 113 aa6.23□□□□□ -1.41
SFXN1-211ENST00000515736 C3orf56Q8N813 242 aa6.23□□□□□ -1.41
SFXN1-211ENST00000515736 ZNF418Q8TF45 676 aaPredicted RBP6.23□□□□□ -1.41
SFXN1-211ENST00000515736 GTSF1Q8WW33 167 aa6.23□□□□□ -1.41
SFXN1-211ENST00000515736 C17orf77Q96MU5 243 aa6.23□□□□□ -1.41
SFXN1-211ENST00000515736 ASCL2Q99929 193 aa6.23□□□□□ -1.41
SFXN1-211ENST00000515736 ALKBH7Q9BT30 221 aaPredicted RBP6.23□□□□□ -1.41
SFXN1-211ENST00000515736 NAGKQ9UJ70 344 aa6.23□□□□□ -1.41
SFXN1-211ENST00000515736 CUBNO60494 3623 aa6.23□□□□□ -1.41
SFXN1-211ENST00000515736 CLPSL1A2RUU4 121 aa6.22□□□□□ -1.41
SFXN1-211ENST00000515736 TMEM189A5PLL7 270 aa6.22□□□□□ -1.41
SFXN1-211ENST00000515736 F2Z2F3 143 aa6.22□□□□□ -1.41
SFXN1-211ENST00000515736 K7EMT4 169 aa6.22□□□□□ -1.41
SFXN1-211ENST00000515736 M0R3E3 92 aa6.22□□□□□ -1.41
SFXN1-211ENST00000515736 SPINK4O60575 86 aa6.22□□□□□ -1.41
SFXN1-211ENST00000515736 IGHV3-23P01764 117 aa6.22□□□□□ -1.41
SFXN1-211ENST00000515736 APOHP02749 345 aaPredicted RBP6.22□□□□□ -1.41
SFXN1-211ENST00000515736 OR5AL1P0C617 328 aa6.22□□□□□ -1.41
SFXN1-211ENST00000515736 CTRLP40313 264 aa6.22□□□□□ -1.41
SFXN1-211ENST00000515736 SLC35B1P78383 322 aa6.22□□□□□ -1.41
SFXN1-211ENST00000515736 HIST1H1AQ02539 215 aaPredicted RBP6.22□□□□□ -1.41
SFXN1-211ENST00000515736 LCN12Q6JVE5 192 aa6.22□□□□□ -1.41
SFXN1-211ENST00000515736 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.22□□□□□ -1.41
SFXN1-211ENST00000515736 LINC00322Q6ZN03 302 aaPredicted RBP6.22□□□□□ -1.41
SFXN1-211ENST00000515736 SMAD5-AS1Q9Y6J3 95 aa6.22□□□□□ -1.41
SFXN1-211ENST00000515736 S4R3C0 116 aa6.22□□□□□ -1.41
SFXN1-211ENST00000515736 LOC102724200A0A096LPH7 203 aaPredicted RBP6.21□□□□□ -1.42
SFXN1-211ENST00000515736 FABP5P3A8MUU1 101 aa6.21□□□□□ -1.42
SFXN1-211ENST00000515736 HSBP1O75506 76 aa6.21□□□□□ -1.42
SFXN1-211ENST00000515736 FSHBP01225 129 aa6.21□□□□□ -1.42
SFXN1-211ENST00000515736 SNRPCP09234 159 aaKnown RBP6.21□□□□□ -1.42
SFXN1-211ENST00000515736 RPL24P83731 157 aaKnown RBP6.21□□□□□ -1.42
SFXN1-211ENST00000515736 DEFA6Q01524 100 aa6.21□□□□□ -1.42
SFXN1-211ENST00000515736 KRTAP15-1Q3LI76 137 aa6.21□□□□□ -1.42
SFXN1-211ENST00000515736 TMEM78Q5T7P6 136 aa6.21□□□□□ -1.42
SFXN1-211ENST00000515736 TEX43Q6ZNM6 134 aa6.21□□□□□ -1.42
SFXN1-211ENST00000515736 C9orf47Q6ZRZ4 202 aa6.21□□□□□ -1.42
SFXN1-211ENST00000515736 TCF24Q7RTU0 167 aa6.21□□□□□ -1.42
SFXN1-211ENST00000515736 RPL36ALQ969Q0 106 aaKnown RBP6.21□□□□□ -1.42
SFXN1-211ENST00000515736 PGLYRP4Q96LB8 373 aa6.21□□□□□ -1.42
SFXN1-211ENST00000515736 CNFNQ9BYD5 112 aa6.21□□□□□ -1.42
SFXN1-211ENST00000515736 KIR2DL5BA0A0G2JN68 375 aa6.2□□□□□ -1.42
SFXN1-211ENST00000515736 KIR2DL5BA0A0G2JPC4 375 aa6.2□□□□□ -1.42
SFXN1-211ENST00000515736 LINC00587B1AMM8 73 aa6.2□□□□□ -1.42
SFXN1-211ENST00000515736 CCL24O00175 119 aa6.2□□□□□ -1.42
SFXN1-211ENST00000515736 OVOL1O14753 267 aa6.2□□□□□ -1.42
SFXN1-211ENST00000515736 SH2D1AO60880 128 aa6.2□□□□□ -1.42
SFXN1-211ENST00000515736 IGHG4P01861 327 aa6.2□□□□□ -1.42
SFXN1-211ENST00000515736 PRSS2P07478 247 aa6.2□□□□□ -1.42
SFXN1-211ENST00000515736 DDTP30046 118 aa6.2□□□□□ -1.42
SFXN1-211ENST00000515736 TWIST1Q15672 202 aa6.2□□□□□ -1.42
SFXN1-211ENST00000515736 PMCHL1Q16048 86 aa6.2□□□□□ -1.42
SFXN1-211ENST00000515736 GDF5OSQ5U4N7 250 aa6.2□□□□□ -1.42
SFXN1-211ENST00000515736 KIR2DL5AQ8N109 375 aa6.2□□□□□ -1.42
SFXN1-211ENST00000515736 PHLDA1Q8WV24 401 aaPredicted RBP6.2□□□□□ -1.42
SFXN1-211ENST00000515736 C20orf144Q9BQM9 153 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms