RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 GLMPQ8WWB7 406 aa9.71□□□□□ -0.86
SDHA-216ENST00000514027 ITLN2Q8WWU7 325 aaPredicted RBP9.71□□□□□ -0.86
SDHA-216ENST00000514027 CACNA1BQ00975 2339 aa9.7□□□□□ -0.86
SDHA-216ENST00000514027 IGHV3-49A0A0A0MS15 119 aa9.7□□□□□ -0.86
SDHA-216ENST00000514027 NPFFO15130 113 aa9.7□□□□□ -0.86
SDHA-216ENST00000514027 GNLYP22749 145 aa9.7□□□□□ -0.86
SDHA-216ENST00000514027 ZNF80P51504 273 aaPredicted RBP9.7□□□□□ -0.86
SDHA-216ENST00000514027 ERCC8Q13216 396 aa9.7□□□□□ -0.86
SDHA-216ENST00000514027 AMN1Q8IY45 258 aa9.7□□□□□ -0.86
SDHA-216ENST00000514027 RAX2Q96IS3 184 aa9.7□□□□□ -0.86
SDHA-216ENST00000514027 NHP2Q9NX24 153 aaKnown RBP9.7□□□□□ -0.86
SDHA-216ENST00000514027 IGLL5B9A064 214 aa9.7□□□□□ -0.86
SDHA-216ENST00000514027 AMTNQ6UX39 209 aa9.7□□□□□ -0.86
SDHA-216ENST00000514027 OR8A1Q8NGG7 326 aa9.7□□□□□ -0.86
SDHA-216ENST00000514027 ATP6V0E2Q8NHE4 81 aa9.7□□□□□ -0.86
SDHA-216ENST00000514027 VCX2Q9H322 139 aa9.7□□□□□ -0.86
SDHA-216ENST00000514027 A0A1B0GWB2 263 aa9.69□□□□□ -0.86
SDHA-216ENST00000514027 IGHG4P01861 327 aa9.69□□□□□ -0.86
SDHA-216ENST00000514027 CCDC140Q96MF4 163 aa9.69□□□□□ -0.86
SDHA-216ENST00000514027 ZFAND3Q9H8U3 227 aa9.69□□□□□ -0.86
SDHA-216ENST00000514027 HIGD1BQ9P298 99 aa9.69□□□□□ -0.86
SDHA-216ENST00000514027 PIEZO1Q92508 2521 aa9.69□□□□□ -0.86
SDHA-216ENST00000514027 ORM1P02763 201 aa9.68□□□□□ -0.86
SDHA-216ENST00000514027 IFI27P40305 119 aaPredicted RBP9.68□□□□□ -0.86
SDHA-216ENST00000514027 CACNG7P62955 275 aa9.68□□□□□ -0.86
SDHA-216ENST00000514027 TWIST1Q15672 202 aa9.68□□□□□ -0.86
SDHA-216ENST00000514027 GATD1Q8NB37 220 aa9.68□□□□□ -0.86
SDHA-216ENST00000514027 CHAC1Q9BUX1 264 aa9.68□□□□□ -0.86
SDHA-216ENST00000514027 YAE1D1Q9NRH1 226 aa9.68□□□□□ -0.86
SDHA-216ENST00000514027 LINC00527Q9UJ94 153 aa9.68□□□□□ -0.86
SDHA-216ENST00000514027 CELSR1Q9NYQ6 3014 aa9.68□□□□□ -0.86
SDHA-216ENST00000514027 CENPVL3A0A0U1RRI6 287 aa9.68□□□□□ -0.86
SDHA-216ENST00000514027 ID1P41134 155 aa9.68□□□□□ -0.86
SDHA-216ENST00000514027 FAM106AQ4KMX7 169 aa9.68□□□□□ -0.86
SDHA-216ENST00000514027 PRELID3AQ96N28 172 aa9.68□□□□□ -0.86
SDHA-216ENST00000514027 PRAC2D3DTV9 90 aa9.67□□□□□ -0.86
SDHA-216ENST00000514027 BUB3O43684 328 aa9.67□□□□□ -0.86
SDHA-216ENST00000514027 NHLRC4P0CG21 123 aaPredicted RBP9.67□□□□□ -0.86
SDHA-216ENST00000514027 ZNF493Q6ZR52 646 aa9.67□□□□□ -0.86
SDHA-216ENST00000514027 EEF1AKMT3Q96AZ1 226 aa9.67□□□□□ -0.86
SDHA-216ENST00000514027 ZFHX3Q15911 3703 aa9.67□□□□□ -0.86
SDHA-216ENST00000514027 A0A096LNJ9 63 aa9.67□□□□□ -0.86
SDHA-216ENST00000514027 SMKR1H3BMG3 65 aa9.67□□□□□ -0.86
SDHA-216ENST00000514027 LOXL1Q08397 574 aaPredicted RBP9.67□□□□□ -0.86
SDHA-216ENST00000514027 FAM104BQ5XKR9 115 aa9.67□□□□□ -0.86
SDHA-216ENST00000514027 ZFAND6Q6FIF0 208 aa9.67□□□□□ -0.86
SDHA-216ENST00000514027 BRD3OSQ6XYD6 125 aa9.67□□□□□ -0.86
SDHA-216ENST00000514027 ORMDL3Q8N138 153 aa9.67□□□□□ -0.86
SDHA-216ENST00000514027 C5orf56Q8N8D9 126 aa9.67□□□□□ -0.86
SDHA-216ENST00000514027 IGHV4-39P01824 125 aa9.66□□□□□ -0.86
SDHA-216ENST00000514027 PPIFP30405 207 aaKnown RBP9.66□□□□□ -0.86
SDHA-216ENST00000514027 FXYD7P58549 80 aa9.66□□□□□ -0.86
SDHA-216ENST00000514027 MRPL51Q4U2R6 128 aaKnown RBP9.66□□□□□ -0.86
SDHA-216ENST00000514027 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.66□□□□□ -0.86
SDHA-216ENST00000514027 PRSS29PA6NIE9 313 aa9.66□□□□□ -0.86
SDHA-216ENST00000514027 IL17RELQ6ZVW7 336 aa9.66□□□□□ -0.86
SDHA-216ENST00000514027 CEND1Q8N111 149 aa9.66□□□□□ -0.86
SDHA-216ENST00000514027 TRAV40A0A0B4J280 105 aa9.65□□□□□ -0.86
SDHA-216ENST00000514027 CLPSL1A2RUU4 121 aa9.65□□□□□ -0.86
SDHA-216ENST00000514027 CKS2P33552 79 aa9.65□□□□□ -0.86
SDHA-216ENST00000514027 COX8CQ7Z4L0 72 aa9.65□□□□□ -0.86
SDHA-216ENST00000514027 NFE4Q86UQ8 179 aa9.65□□□□□ -0.86
SDHA-216ENST00000514027 METTL26Q96S19 204 aa9.65□□□□□ -0.86
SDHA-216ENST00000514027 COL12A1Q99715 3063 aa9.65□□□□□ -0.87
SDHA-216ENST00000514027 TEX29Q8N6K0 151 aa9.64□□□□□ -0.87
SDHA-216ENST00000514027 CITED1Q99966 193 aa9.64□□□□□ -0.87
SDHA-216ENST00000514027 PRORYQ9H606 182 aa9.64□□□□□ -0.87
SDHA-216ENST00000514027 MSRB1Q9NZV6 116 aa9.64□□□□□ -0.87
SDHA-216ENST00000514027 MOB4Q9Y3A3 225 aa9.64□□□□□ -0.87
SDHA-216ENST00000514027 TRBV7-1A0A0A6YYK4 115 aa9.64□□□□□ -0.87
SDHA-216ENST00000514027 GAGE12JA6NER3 117 aa9.64□□□□□ -0.87
SDHA-216ENST00000514027 FABP5P3A8MUU1 101 aa9.64□□□□□ -0.87
SDHA-216ENST00000514027 GAGE7O76087 117 aa9.64□□□□□ -0.87
SDHA-216ENST00000514027 GAGE12FP0CL80 117 aa9.64□□□□□ -0.87
SDHA-216ENST00000514027 GAGE12GP0CL81 117 aa9.64□□□□□ -0.87
SDHA-216ENST00000514027 GAGE12IP0CL82 117 aa9.64□□□□□ -0.87
SDHA-216ENST00000514027 GAGE4Q13068 117 aa9.64□□□□□ -0.87
SDHA-216ENST00000514027 SLC50A1Q9BRV3 221 aa9.64□□□□□ -0.87
SDHA-216ENST00000514027 VPS13CQ709C8 3753 aa9.64□□□□□ -0.87
SDHA-216ENST00000514027 A0A087WX48 190 aa9.63□□□□□ -0.87
SDHA-216ENST00000514027 TRAV41A0A0B4J266 112 aa9.63□□□□□ -0.87
SDHA-216ENST00000514027 K7EMI3 77 aa9.63□□□□□ -0.87
SDHA-216ENST00000514027 NPYP01303 97 aa9.63□□□□□ -0.87
SDHA-216ENST00000514027 IGLC6P0CF74 106 aa9.63□□□□□ -0.87
SDHA-216ENST00000514027 ABCA2Q9BZC7 2435 aa9.63□□□□□ -0.87
SDHA-216ENST00000514027 CCDC179H3BU77 68 aa9.63□□□□□ -0.87
SDHA-216ENST00000514027 RRN3P1Q2M238 152 aa9.63□□□□□ -0.87
SDHA-216ENST00000514027 CFAP126Q5VTH2 177 aa9.63□□□□□ -0.87
SDHA-216ENST00000514027 U3KQK5 164 aa9.63□□□□□ -0.87
SDHA-216ENST00000514027 CACNA1AO00555 2505 aa9.62□□□□□ -0.87
SDHA-216ENST00000514027 TRGV3P03979 118 aa9.62□□□□□ -0.87
SDHA-216ENST00000514027 LY6EQ16553 131 aa9.62□□□□□ -0.87
SDHA-216ENST00000514027 TMEM78Q5T7P6 136 aa9.62□□□□□ -0.87
SDHA-216ENST00000514027 PIFOQ8TCI5 191 aa9.62□□□□□ -0.87
SDHA-216ENST00000514027 IGKV2D-26A0A0A0MRZ7 120 aa9.62□□□□□ -0.87
SDHA-216ENST00000514027 IGHV1-69DA0A0B4J2H0 117 aa9.62□□□□□ -0.87
SDHA-216ENST00000514027 IGHV4-61A0A0C4DH41 118 aa9.62□□□□□ -0.87
SDHA-216ENST00000514027 IGHV1-69P01742 117 aa9.62□□□□□ -0.87
SDHA-216ENST00000514027 SMCPP49901 116 aaPredicted RBP9.62□□□□□ -0.87
SDHA-216ENST00000514027 C12orf74Q32Q52 190 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms