RNA–Protein interactions for RNA: ENST00000507900.5

DDX41-207, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 1,564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-207ENST00000507900 AMBPP02760 352 aa12.33□□□□□ -0.44
DDX41-207ENST00000507900 CD33P20138 364 aa12.33□□□□□ -0.44
DDX41-207ENST00000507900 RNASE4P34096 147 aaKnown RBP12.33□□□□□ -0.44
DDX41-207ENST00000507900 DNLZQ5SXM8 178 aa12.33□□□□□ -0.44
DDX41-207ENST00000507900 LINC00518Q8N0U6 118 aa12.33□□□□□ -0.44
DDX41-207ENST00000507900 TMEM256Q8N2U0 113 aa12.33□□□□□ -0.44
DDX41-207ENST00000507900 C18orf32Q8TCD1 76 aa12.33□□□□□ -0.44
DDX41-207ENST00000507900 ZNF256Q9Y2P7 627 aaPredicted RBP12.33□□□□□ -0.44
DDX41-207ENST00000507900 J3KRW8 73 aa12.32□□□□□ -0.44
DDX41-207ENST00000507900 KIR3DS1Q14943 382 aa12.32□□□□□ -0.44
DDX41-207ENST00000507900 SETXQ7Z333 2677 aaKnown RBP12.32□□□□□ -0.44
DDX41-207ENST00000507900 IGHV4-4A0A075B6R2 117 aa12.31□□□□□ -0.44
DDX41-207ENST00000507900 C7orf71A4D174 169 aa12.31□□□□□ -0.44
DDX41-207ENST00000507900 SMIM6P0DI80 62 aa12.31□□□□□ -0.44
DDX41-207ENST00000507900 MED14OSP0DP75 135 aa12.31□□□□□ -0.44
DDX41-207ENST00000507900 HLA-DRB4P13762 266 aa12.31□□□□□ -0.44
DDX41-207ENST00000507900 FABP4P15090 132 aa12.31□□□□□ -0.44
DDX41-207ENST00000507900 NTF3P20783 257 aa12.31□□□□□ -0.44
DDX41-207ENST00000507900 TSPOP30536 169 aa12.31□□□□□ -0.44
DDX41-207ENST00000507900 DEFB131AP59861 70 aa12.31□□□□□ -0.44
DDX41-207ENST00000507900 AMTNQ6UX39 209 aa12.31□□□□□ -0.44
DDX41-207ENST00000507900 BAGE3Q86Y29 109 aa12.31□□□□□ -0.44
DDX41-207ENST00000507900 MAP6D1Q9H9H5 199 aa12.31□□□□□ -0.44
DDX41-207ENST00000507900 HLA-DRB4X5D2U9 266 aa12.31□□□□□ -0.44
DDX41-207ENST00000507900 NUPR1O60356 82 aa12.3□□□□□ -0.44
DDX41-207ENST00000507900 SERF1AO75920 110 aa12.3□□□□□ -0.44
DDX41-207ENST00000507900 DMRTA1Q5VZB9 504 aa12.3□□□□□ -0.44
DDX41-207ENST00000507900 TMEM18Q96B42 140 aa12.3□□□□□ -0.44
DDX41-207ENST00000507900 CDKN1BP46527 198 aa12.3□□□□□ -0.44
DDX41-207ENST00000507900 CACNG7P62955 275 aa12.3□□□□□ -0.44
DDX41-207ENST00000507900 TWIST1Q15672 202 aa12.3□□□□□ -0.44
DDX41-207ENST00000507900 NSUN5P1Q3KNT7 163 aa12.3□□□□□ -0.44
DDX41-207ENST00000507900 ANXA2RQ3ZCQ2 193 aa12.3□□□□□ -0.44
DDX41-207ENST00000507900 FAM104BQ5XKR9 115 aa12.3□□□□□ -0.44
DDX41-207ENST00000507900 PACRGQ96M98 296 aaPredicted RBP12.3□□□□□ -0.44
DDX41-207ENST00000507900 TMEM191AQ9H0A3 160 aa12.3□□□□□ -0.44
DDX41-207ENST00000507900 ZNF324O75467 553 aaPredicted RBP12.29□□□□□ -0.44
DDX41-207ENST00000507900 TDRG1Q3Y452 100 aa12.29□□□□□ -0.44
DDX41-207ENST00000507900 OR10D4PQ8NGN7 298 aa12.29□□□□□ -0.44
DDX41-207ENST00000507900 NAGKQ9UJ70 344 aa12.29□□□□□ -0.44
DDX41-207ENST00000507900 H3BMM0 161 aa12.28□□□□□ -0.44
DDX41-207ENST00000507900 ASIPP42127 132 aa12.28□□□□□ -0.44
DDX41-207ENST00000507900 OR2K2Q8NGT1 345 aa12.28□□□□□ -0.44
DDX41-207ENST00000507900 KCNS1Q96KK3 526 aa12.28□□□□□ -0.44
DDX41-207ENST00000507900 CLUHP3Q96NS8 147 aa12.28□□□□□ -0.44
DDX41-207ENST00000507900 RCHY1Q96PM5 261 aa12.28□□□□□ -0.44
DDX41-207ENST00000507900 SCRT2Q9NQ03 307 aa12.28□□□□□ -0.44
DDX41-207ENST00000507900 MUC21A0A0G2JKD1 596 aa12.27□□□□□ -0.44
DDX41-207ENST00000507900 MUC21A0A140T8X8 626 aa12.27□□□□□ -0.44
DDX41-207ENST00000507900 KNCNA6PVL3 124 aa12.27□□□□□ -0.44
DDX41-207ENST00000507900 H3BVH4 76 aa12.27□□□□□ -0.44
DDX41-207ENST00000507900 PRR31Q5SQ13 230 aa12.27□□□□□ -0.44
DDX41-207ENST00000507900 MUC21Q5SSG8 566 aa12.27□□□□□ -0.44
DDX41-207ENST00000507900 OR10AG1Q8NH19 301 aa12.27□□□□□ -0.44
DDX41-207ENST00000507900 U3KQK5 164 aa12.27□□□□□ -0.44
DDX41-207ENST00000507900 AGRNO00468 2067 aa12.27□□□□□ -0.45
DDX41-207ENST00000507900 IGKV3-20P01619 116 aa12.26□□□□□ -0.45
DDX41-207ENST00000507900 IGLV1-51P01701 117 aa12.26□□□□□ -0.45
DDX41-207ENST00000507900 IQCJQ1A5X6 159 aa12.26□□□□□ -0.45
DDX41-207ENST00000507900 SPINK13Q1W4C9 94 aa12.26□□□□□ -0.45
DDX41-207ENST00000507900 AMN1Q8IY45 258 aa12.26□□□□□ -0.45
DDX41-207ENST00000507900 MSRB1Q9NZV6 116 aa12.26□□□□□ -0.45
DDX41-207ENST00000507900 TRAV12-3A0A0B4J271 114 aa12.26□□□□□ -0.45
DDX41-207ENST00000507900 M0R2Z0 102 aa12.26□□□□□ -0.45
DDX41-207ENST00000507900 ODF3L2Q3SX64 289 aa12.26□□□□□ -0.45
DDX41-207ENST00000507900 FAM159AQ6UWV7 190 aa12.26□□□□□ -0.45
DDX41-207ENST00000507900 C12orf57Q99622 126 aa12.26□□□□□ -0.45
DDX41-207ENST00000507900 C2CD3Q4AC94 2353 aa12.25□□□□□ -0.45
DDX41-207ENST00000507900 SAP30O75446 220 aa12.25□□□□□ -0.45
DDX41-207ENST00000507900 RNASE3P12724 160 aaKnown RBP12.25□□□□□ -0.45
DDX41-207ENST00000507900 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.25□□□□□ -0.45
DDX41-207ENST00000507900 LINC00482Q8N8I6 264 aa12.25□□□□□ -0.45
DDX41-207ENST00000507900 TRAV12-2A0A075B6T6 113 aa12.24□□□□□ -0.45
DDX41-207ENST00000507900 RBMY1BA6NDE4 496 aaKnown RBP12.24□□□□□ -0.45
DDX41-207ENST00000507900 RBMY1EA6NEQ0 496 aaKnown RBP12.24□□□□□ -0.45
DDX41-207ENST00000507900 RBMY1DP0C7P1 496 aaKnown RBP12.24□□□□□ -0.45
DDX41-207ENST00000507900 S100A4P26447 101 aaKnown RBP12.24□□□□□ -0.45
DDX41-207ENST00000507900 CMC4P56277 68 aaPredicted RBP12.24□□□□□ -0.45
DDX41-207ENST00000507900 SSTP61278 116 aa12.24□□□□□ -0.45
DDX41-207ENST00000507900 MRPL51Q4U2R6 128 aaKnown RBP12.24□□□□□ -0.45
DDX41-207ENST00000507900 RNF185Q96GF1 192 aa12.24□□□□□ -0.45
DDX41-207ENST00000507900 FAM110AQ9BQ89 295 aa12.24□□□□□ -0.45
DDX41-207ENST00000507900 SORL1Q92673 2214 aa12.24□□□□□ -0.45
DDX41-207ENST00000507900 WNK1Q9H4A3 2382 aa12.23□□□□□ -0.45
DDX41-207ENST00000507900 SETD2Q9BYW2 2564 aaPredicted RBP12.23□□□□□ -0.45
DDX41-207ENST00000507900 GNRH2O43555 120 aa12.23□□□□□ -0.45
DDX41-207ENST00000507900 NXPH4O95158 308 aa12.23□□□□□ -0.45
DDX41-207ENST00000507900 ZNF124Q15973 351 aa12.23□□□□□ -0.45
DDX41-207ENST00000507900 PYY3Q5JQD4 70 aa12.23□□□□□ -0.45
DDX41-207ENST00000507900 SPANXN1Q5VSR9 72 aa12.23□□□□□ -0.45
DDX41-207ENST00000507900 ORMDL3Q8N138 153 aa12.23□□□□□ -0.45
DDX41-207ENST00000507900 D6R8Y8 96 aa12.22□□□□□ -0.45
DDX41-207ENST00000507900 CRXO43186 299 aaPredicted RBP12.22□□□□□ -0.45
DDX41-207ENST00000507900 PPBPP02775 128 aa12.22□□□□□ -0.45
DDX41-207ENST00000507900 PF4P02776 101 aa12.22□□□□□ -0.45
DDX41-207ENST00000507900 RAB4AP20338 218 aa12.22□□□□□ -0.45
DDX41-207ENST00000507900 CHCHD1Q96BP2 118 aaKnown RBP12.22□□□□□ -0.45
DDX41-207ENST00000507900 URB1-AS1Q96HZ7 61 aa12.22□□□□□ -0.45
DDX41-207ENST00000507900 F8P00451 2351 aa12.22□□□□□ -0.45
DDX41-207ENST00000507900 FLNBO75369 2602 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms