RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 TCL1AP56279 114 aa12.76□□□□□ -0.37
RNF4-209ENST00000507784 RBMY1FQ15415 496 aaKnown RBP12.76□□□□□ -0.37
RNF4-209ENST00000507784 TMEM88Q6PEY1 159 aa12.76□□□□□ -0.37
RNF4-209ENST00000507784 C20orf144Q9BQM9 153 aa12.76□□□□□ -0.37
RNF4-209ENST00000507784 SMCO4Q9NRQ5 59 aa12.76□□□□□ -0.37
RNF4-209ENST00000507784 TMEM242Q9NWH2 141 aa12.76□□□□□ -0.37
RNF4-209ENST00000507784 GOLT1BQ9Y3E0 138 aa12.76□□□□□ -0.37
RNF4-209ENST00000507784 GNRH2O43555 120 aa12.75□□□□□ -0.37
RNF4-209ENST00000507784 GIG44P09565 113 aaPredicted RBP12.75□□□□□ -0.37
RNF4-209ENST00000507784 S100PP25815 95 aa12.75□□□□□ -0.37
RNF4-209ENST00000507784 KCNIP4Q6PIL6 250 aa12.75□□□□□ -0.37
RNF4-209ENST00000507784 CBLN2Q8IUK8 224 aa12.75□□□□□ -0.37
RNF4-209ENST00000507784 KCNS1Q96KK3 526 aa12.75□□□□□ -0.37
RNF4-209ENST00000507784 CBY3A6NI87 242 aa12.74□□□□□ -0.37
RNF4-209ENST00000507784 FAM3BP58499 235 aaPredicted RBP12.74□□□□□ -0.37
RNF4-209ENST00000507784 CT83Q5H943 113 aa12.74□□□□□ -0.37
RNF4-209ENST00000507784 KPRPQ5T749 579 aaPredicted RBP12.74□□□□□ -0.37
RNF4-209ENST00000507784 C1orf158Q8N1D5 194 aa12.74□□□□□ -0.37
RNF4-209ENST00000507784 TSKUQ8WUA8 353 aa12.74□□□□□ -0.37
RNF4-209ENST00000507784 TPPP3Q9BW30 176 aa12.74□□□□□ -0.37
RNF4-209ENST00000507784 TIMM8BQ9Y5J9 83 aaPredicted RBP12.74□□□□□ -0.37
RNF4-209ENST00000507784 URGCP-MRPS24S4R325 110 aa12.74□□□□□ -0.37
RNF4-209ENST00000507784 KIR2DL5BA0A0G2JN68 375 aa12.73□□□□□ -0.37
RNF4-209ENST00000507784 KIR2DL5BA0A0G2JPC4 375 aa12.73□□□□□ -0.37
RNF4-209ENST00000507784 S100A4P26447 101 aaKnown RBP12.73□□□□□ -0.37
RNF4-209ENST00000507784 DEFB121Q5J5C9 76 aa12.73□□□□□ -0.37
RNF4-209ENST00000507784 KIR2DL5AQ8N109 375 aa12.73□□□□□ -0.37
RNF4-209ENST00000507784 TMEM256Q8N2U0 113 aa12.73□□□□□ -0.37
RNF4-209ENST00000507784 KIR2DL5BQ8NHK3 375 aa12.73□□□□□ -0.37
RNF4-209ENST00000507784 PYGO2Q9BRQ0 406 aa12.73□□□□□ -0.37
RNF4-209ENST00000507784 TP53TG3Q9ULZ0 132 aa12.73□□□□□ -0.37
RNF4-209ENST00000507784 SMIM27A0A1W2PRY6 76 aa12.72□□□□□ -0.37
RNF4-209ENST00000507784 TYMSP04818 313 aa12.72□□□□□ -0.37
RNF4-209ENST00000507784 ASIPP42127 132 aa12.72□□□□□ -0.37
RNF4-209ENST00000507784 PGLYRP4Q96LB8 373 aa12.72□□□□□ -0.37
RNF4-209ENST00000507784 IMMP2LQ96T52 175 aa12.72□□□□□ -0.37
RNF4-209ENST00000507784 NEU1Q99519 415 aa12.72□□□□□ -0.37
RNF4-209ENST00000507784 PKD1L1Q8TDX9 2849 aa12.71□□□□□ -0.37
RNF4-209ENST00000507784 CXorf65A6NEN9 183 aa12.71□□□□□ -0.37
RNF4-209ENST00000507784 A8MZ25 164 aa12.71□□□□□ -0.37
RNF4-209ENST00000507784 SPINK4O60575 86 aa12.71□□□□□ -0.37
RNF4-209ENST00000507784 PRM2P04554 102 aa12.71□□□□□ -0.37
RNF4-209ENST00000507784 GFRA4Q9GZZ7 299 aa12.71□□□□□ -0.37
RNF4-209ENST00000507784 NAT8BQ9UHF3 227 aa12.71□□□□□ -0.37
RNF4-209ENST00000507784 TRGV11A0A075B6L2 103 aa12.7□□□□□ -0.38
RNF4-209ENST00000507784 A0A1W2PPQ1 181 aa12.7□□□□□ -0.38
RNF4-209ENST00000507784 HIGD1CA8MV81 97 aa12.7□□□□□ -0.38
RNF4-209ENST00000507784 K7EIL1 84 aa12.7□□□□□ -0.38
RNF4-209ENST00000507784 UBE2CO00762 179 aa12.7□□□□□ -0.38
RNF4-209ENST00000507784 FRMD6-AS1P0C7T7 363 aa12.7□□□□□ -0.38
RNF4-209ENST00000507784 SSTP61278 116 aa12.7□□□□□ -0.38
RNF4-209ENST00000507784 FER1L6-AS1Q8NA97 138 aa12.7□□□□□ -0.38
RNF4-209ENST00000507784 CSNK1G2-AS1Q8NCQ2 148 aa12.7□□□□□ -0.38
RNF4-209ENST00000507784 GTSF1Q8WW33 167 aa12.7□□□□□ -0.38
RNF4-209ENST00000507784 H3BVH4 76 aa12.69□□□□□ -0.38
RNF4-209ENST00000507784 CXCL1P09341 107 aa12.69□□□□□ -0.38
RNF4-209ENST00000507784 DEFB135Q30KP9 77 aa12.69□□□□□ -0.38
RNF4-209ENST00000507784 TDRG1Q3Y452 100 aa12.69□□□□□ -0.38
RNF4-209ENST00000507784 LYZL1Q6UWQ5 148 aa12.69□□□□□ -0.38
RNF4-209ENST00000507784 ZNF575Q86XF7 245 aa12.69□□□□□ -0.38
RNF4-209ENST00000507784 NUP35Q8NFH5 326 aa12.69□□□□□ -0.38
RNF4-209ENST00000507784 BORCS7Q96B45 105 aa12.69□□□□□ -0.38
RNF4-209ENST00000507784 MUC21A0A0G2JKD1 596 aa12.68□□□□□ -0.38
RNF4-209ENST00000507784 MUC21A0A140T8X8 626 aa12.68□□□□□ -0.38
RNF4-209ENST00000507784 FAM231BA6NCW3 169 aa12.68□□□□□ -0.38
RNF4-209ENST00000507784 ARMS2P0C7Q2 107 aa12.68□□□□□ -0.38
RNF4-209ENST00000507784 LINC00467Q9BRT7 94 aa12.68□□□□□ -0.38
RNF4-209ENST00000507784 TGIF2-C20orf24A0A0A6YYL0 155 aa12.67□□□□□ -0.38
RNF4-209ENST00000507784 IGHV3-16A0A0C4DH30 117 aa12.67□□□□□ -0.38
RNF4-209ENST00000507784 SPRY2O43597 315 aa12.67□□□□□ -0.38
RNF4-209ENST00000507784 IGLC6P0CF74 106 aa12.67□□□□□ -0.38
RNF4-209ENST00000507784 AZU1P20160 251 aa12.67□□□□□ -0.38
RNF4-209ENST00000507784 ELOBQ15370 118 aa12.67□□□□□ -0.38
RNF4-209ENST00000507784 RCHY1Q96PM5 261 aa12.67□□□□□ -0.38
RNF4-209ENST00000507784 MDFICQ9P1T7 246 aa12.67□□□□□ -0.38
RNF4-209ENST00000507784 FOXA3P55318 350 aaPredicted RBP12.66□□□□□ -0.38
RNF4-209ENST00000507784 ZNF415Q09FC8 603 aa12.66□□□□□ -0.38
RNF4-209ENST00000507784 RRN3P1Q2M238 152 aa12.66□□□□□ -0.38
RNF4-209ENST00000507784 DNLZQ5SXM8 178 aa12.66□□□□□ -0.38
RNF4-209ENST00000507784 MRPL54Q6P161 138 aaKnown RBP12.66□□□□□ -0.38
RNF4-209ENST00000507784 ZNF705AQ6ZN79 300 aaPredicted RBP12.66□□□□□ -0.38
RNF4-209ENST00000507784 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.66□□□□□ -0.38
RNF4-209ENST00000507784 BTF3L4Q96K17 158 aa12.66□□□□□ -0.38
RNF4-209ENST00000507784 F2Z2F3 143 aa12.65□□□□□ -0.38
RNF4-209ENST00000507784 RNASE3P12724 160 aaKnown RBP12.65□□□□□ -0.38
RNF4-209ENST00000507784 PHLDA3Q9Y5J5 127 aa12.65□□□□□ -0.38
RNF4-209ENST00000507784 TRAV9-1A0A075B6T8 112 aa12.64□□□□□ -0.39
RNF4-209ENST00000507784 MED14OSP0DP75 135 aa12.64□□□□□ -0.39
RNF4-209ENST00000507784 RIGQ13278 110 aa12.64□□□□□ -0.39
RNF4-209ENST00000507784 SPANXN1Q5VSR9 72 aa12.64□□□□□ -0.39
RNF4-209ENST00000507784 Q6ZWC4 215 aa12.64□□□□□ -0.39
RNF4-209ENST00000507784 OR11H2Q8NH07 326 aa12.64□□□□□ -0.39
RNF4-209ENST00000507784 MRAPQ8TCY5 172 aa12.64□□□□□ -0.39
RNF4-209ENST00000507784 GSN-AS1Q9NRJ2 163 aa12.64□□□□□ -0.39
RNF4-209ENST00000507784 A0A1B0GUT8 65 aa12.63□□□□□ -0.39
RNF4-209ENST00000507784 SNAI2O43623 268 aa12.63□□□□□ -0.39
RNF4-209ENST00000507784 OR5AL1P0C617 328 aa12.63□□□□□ -0.39
RNF4-209ENST00000507784 TWIST1Q15672 202 aa12.63□□□□□ -0.39
RNF4-209ENST00000507784 OR10AG1Q8NH19 301 aa12.63□□□□□ -0.39
RNF4-209ENST00000507784 RNF183Q96D59 192 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms