RNA–Protein interactions for RNA: ENST00000505346.5

SMN2-205, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 3

Gene SMN2, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-205ENST00000505346 LAMC3Q9Y6N6 1575 aa-0.79□□□□□ -2.54
SMN2-205ENST00000505346 TECPR2O15040 1411 aa-0.79□□□□□ -2.54
SMN2-205ENST00000505346 BLMP54132 1417 aaPredicted RBP-0.79□□□□□ -2.54
SMN2-205ENST00000505346 TRAPPC8Q9Y2L5 1435 aa-0.79□□□□□ -2.54
SMN2-205ENST00000505346 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.79□□□□□ -2.54
SMN2-205ENST00000505346 DCHS2Q6V1P9 2916 aa-0.79□□□□□ -2.54
SMN2-205ENST00000505346 MAXP61244 160 aa-0.79□□□□□ -2.54
SMN2-205ENST00000505346 ARF6P62330 175 aa-0.79□□□□□ -2.54
SMN2-205ENST00000505346 Q5XG85 94 aa-0.79□□□□□ -2.54
SMN2-205ENST00000505346 OR8J3Q8NGG0 315 aa-0.79□□□□□ -2.54
SMN2-205ENST00000505346 DMAC1Q96GE9 116 aa-0.79□□□□□ -2.54
SMN2-205ENST00000505346 PRELID3AQ96N28 172 aa-0.79□□□□□ -2.54
SMN2-205ENST00000505346 DOPEY2Q9Y3R5 2298 aa-0.79□□□□□ -2.54
SMN2-205ENST00000505346 TEP1Q99973 2627 aaKnown RBP-0.79□□□□□ -2.54
SMN2-205ENST00000505346 RYR2Q92736 4967 aa-0.79□□□□□ -2.54
SMN2-205ENST00000505346 PTPN13Q12923 2485 aa-0.79□□□□□ -2.54
SMN2-205ENST00000505346 PKD1L1Q8TDX9 2849 aa-0.79□□□□□ -2.54
SMN2-205ENST00000505346 TCOF1Q13428 1488 aaKnown RBP-0.8□□□□□ -2.54
SMN2-205ENST00000505346 H3BQV1 296 aa-0.8□□□□□ -2.54
SMN2-205ENST00000505346 EDF1O60869 148 aaKnown RBP-0.8□□□□□ -2.54
SMN2-205ENST00000505346 NMBP08949 121 aa-0.8□□□□□ -2.54
SMN2-205ENST00000505346 TPT1P13693 172 aaKnown RBP-0.8□□□□□ -2.54
SMN2-205ENST00000505346 SPRR2DP22532 72 aa-0.8□□□□□ -2.54
SMN2-205ENST00000505346 HSD11B1P28845 292 aa-0.8□□□□□ -2.54
SMN2-205ENST00000505346 GLRXP35754 106 aa-0.8□□□□□ -2.54
SMN2-205ENST00000505346 DNAJB13P59910 316 aa-0.8□□□□□ -2.54
SMN2-205ENST00000505346 MPC1Q9Y5U8 109 aa-0.8□□□□□ -2.54
SMN2-205ENST00000505346 AKAP6Q13023 2319 aa-0.8□□□□□ -2.54
SMN2-205ENST00000505346 SPTBN4Q9H254 2564 aa-0.8□□□□□ -2.54
SMN2-205ENST00000505346 VIRMAQ69YN4 1812 aaKnown RBP-0.8□□□□□ -2.54
SMN2-205ENST00000505346 LRP5O75197 1615 aa-0.81□□□□□ -2.54
SMN2-205ENST00000505346 TRDV1A0A1B0GX56 115 aa-0.81□□□□□ -2.54
SMN2-205ENST00000505346 C9JAW5 83 aa-0.81□□□□□ -2.54
SMN2-205ENST00000505346 GABARAPH6UMI1 98 aa-0.81□□□□□ -2.54
SMN2-205ENST00000505346 H7BYZ3 331 aa-0.81□□□□□ -2.54
SMN2-205ENST00000505346 CCKP06307 115 aa-0.81□□□□□ -2.54
SMN2-205ENST00000505346 SAA1P0DJI8 122 aaPredicted RBP-0.81□□□□□ -2.54
SMN2-205ENST00000505346 GTF2A1P52655 376 aaPredicted RBP-0.81□□□□□ -2.54
SMN2-205ENST00000505346 CROCCP2Q86T23 111 aa-0.81□□□□□ -2.54
SMN2-205ENST00000505346 SMIM20Q8N5G0 67 aa-0.81□□□□□ -2.54
SMN2-205ENST00000505346 TEX29Q8N6K0 151 aa-0.81□□□□□ -2.54
SMN2-205ENST00000505346 OR5A2Q8NGI9 324 aa-0.81□□□□□ -2.54
SMN2-205ENST00000505346 OR13C6PQ8NH95 151 aa-0.81□□□□□ -2.54
SMN2-205ENST00000505346 NAT14Q8WUY8 206 aa-0.81□□□□□ -2.54
SMN2-205ENST00000505346 CEP19Q96LK0 163 aa-0.81□□□□□ -2.54
SMN2-205ENST00000505346 NBEAL1Q6ZS30 2694 aa-0.81□□□□□ -2.54
SMN2-205ENST00000505346 HECTD4Q9Y4D8 3996 aa-0.81□□□□□ -2.54
SMN2-205ENST00000505346 COL6A3P12111 3177 aa-0.82□□□□□ -2.54
SMN2-205ENST00000505346 TMEM189A5PLL7 270 aa-0.82□□□□□ -2.54
SMN2-205ENST00000505346 F2Z2F3 143 aa-0.82□□□□□ -2.54
SMN2-205ENST00000505346 IFNA1P01562 189 aa-0.82□□□□□ -2.54
SMN2-205ENST00000505346 RHOHQ15669 191 aa-0.82□□□□□ -2.54
SMN2-205ENST00000505346 CCSMST1Q4G0I0 132 aa-0.82□□□□□ -2.54
SMN2-205ENST00000505346 ATG5Q9H1Y0 275 aa-0.82□□□□□ -2.54
SMN2-205ENST00000505346 C19orf12Q9NSK7 152 aa-0.82□□□□□ -2.54
SMN2-205ENST00000505346 MED11Q9P086 117 aa-0.82□□□□□ -2.54
SMN2-205ENST00000505346 FAM135BQ49AJ0 1406 aa-0.82□□□□□ -2.54
SMN2-205ENST00000505346 ALMS1Q8TCU4 4167 aa-0.83□□□□□ -2.54
SMN2-205ENST00000505346 TFF1P04155 84 aa-0.83□□□□□ -2.54
SMN2-205ENST00000505346 PYYP10082 97 aa-0.83□□□□□ -2.54
SMN2-205ENST00000505346 SLC25A4P12235 298 aa-0.83□□□□□ -2.54
SMN2-205ENST00000505346 GNG3P63215 75 aa-0.83□□□□□ -2.54
SMN2-205ENST00000505346 RPL19P84098 196 aaKnown RBP-0.83□□□□□ -2.54
SMN2-205ENST00000505346 FADDQ13158 208 aa-0.83□□□□□ -2.54
SMN2-205ENST00000505346 CELSR3Q9NYQ7 3312 aa-0.83□□□□□ -2.54
SMN2-205ENST00000505346 SSC5DA1L4H1 1573 aa-0.83□□□□□ -2.54
SMN2-205ENST00000505346 HELZP42694 1942 aaKnown RBP-0.83□□□□□ -2.54
SMN2-205ENST00000505346 DOCK11Q5JSL3 2073 aa-0.84□□□□□ -2.54
SMN2-205ENST00000505346 CDK13Q14004 1512 aaKnown RBP-0.84□□□□□ -2.54
SMN2-205ENST00000505346 EPG5Q9HCE0 2579 aa-0.84□□□□□ -2.54
SMN2-205ENST00000505346 DSPP15924 2871 aaKnown RBP-0.84□□□□□ -2.54
SMN2-205ENST00000505346 GVQW2A0A096LPI5 108 aaPredicted RBP-0.84□□□□□ -2.54
SMN2-205ENST00000505346 LOC107986453A0A1B0GWG9 222 aa-0.84□□□□□ -2.54
SMN2-205ENST00000505346 SDC2P34741 201 aa-0.84□□□□□ -2.54
SMN2-205ENST00000505346 EMX2Q04743 252 aa-0.84□□□□□ -2.54
SMN2-205ENST00000505346 OR51A4Q8NGJ6 313 aa-0.84□□□□□ -2.54
SMN2-205ENST00000505346 TGP01266 2768 aa-0.84□□□□□ -2.54
SMN2-205ENST00000505346 USP9YO00507 2555 aaPredicted RBP-0.84□□□□□ -2.54
SMN2-205ENST00000505346 SPTBN2O15020 2390 aa-0.84□□□□□ -2.54
SMN2-205ENST00000505346 FER1L6Q2WGJ9 1857 aa-0.84□□□□□ -2.54
SMN2-205ENST00000505346 VWFP04275 2813 aa-0.85□□□□□ -2.55
SMN2-205ENST00000505346 IFITM5A6NNB3 132 aa-0.85□□□□□ -2.55
SMN2-205ENST00000505346 MCRIP1C9JLW8 97 aa-0.85□□□□□ -2.55
SMN2-205ENST00000505346 CFDP00746 253 aaPredicted RBP-0.85□□□□□ -2.55
SMN2-205ENST00000505346 ELOF1P60002 83 aaKnown RBP-0.85□□□□□ -2.55
SMN2-205ENST00000505346 BLCAPP62952 87 aa-0.85□□□□□ -2.55
SMN2-205ENST00000505346 BASP1P80723 227 aaKnown RBP-0.85□□□□□ -2.55
SMN2-205ENST00000505346 MORN4Q8NDC4 146 aa-0.85□□□□□ -2.55
SMN2-205ENST00000505346 TMEM141Q96I45 108 aa-0.85□□□□□ -2.55
SMN2-205ENST00000505346 BPESC1Q9GZL8 116 aa-0.85□□□□□ -2.55
SMN2-205ENST00000505346 HECTD1Q9ULT8 2610 aa-0.85□□□□□ -2.55
SMN2-205ENST00000505346 NUBP2Q9Y5Y2 271 aa-0.85□□□□□ -2.55
SMN2-205ENST00000505346 MAP1AP78559 2803 aaPredicted RBP-0.85□□□□□ -2.55
SMN2-205ENST00000505346 LAMB1P07942 1786 aa-0.85□□□□□ -2.55
SMN2-205ENST00000505346 KIDINS220Q9ULH0 1771 aa-0.85□□□□□ -2.55
SMN2-205ENST00000505346 BSNQ9UPA5 3926 aa-0.86□□□□□ -2.55
SMN2-205ENST00000505346 ITPR3Q14573 2671 aa-0.86□□□□□ -2.55
SMN2-205ENST00000505346 TRBV27A0A0K0K1C4 114 aa-0.86□□□□□ -2.55
SMN2-205ENST00000505346 S100A11P31949 105 aa-0.86□□□□□ -2.55
SMN2-205ENST00000505346 TAS2R41P59536 307 aa-0.86□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms