RNA–Protein interactions for RNA: ENST00000502840.5

CDC42SE2-205, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-205ENST00000502840 CACNG7P62955 275 aa2.34□□□□□ -2.03
CDC42SE2-205ENST00000502840 NDPQ00604 133 aa2.34□□□□□ -2.03
CDC42SE2-205ENST00000502840 SCGB2A2Q13296 93 aa2.34□□□□□ -2.03
CDC42SE2-205ENST00000502840 C15orf32Q32M92 178 aa2.34□□□□□ -2.03
CDC42SE2-205ENST00000502840 TMEM97Q5BJF2 176 aa2.34□□□□□ -2.03
CDC42SE2-205ENST00000502840 SPANXN1Q5VSR9 72 aa2.34□□□□□ -2.03
CDC42SE2-205ENST00000502840 FAM104BQ5XKR9 115 aa2.34□□□□□ -2.03
CDC42SE2-205ENST00000502840 C12orf54Q6X4T0 127 aa2.34□□□□□ -2.03
CDC42SE2-205ENST00000502840 SPATA12Q7Z6I5 190 aa2.34□□□□□ -2.03
CDC42SE2-205ENST00000502840 MRPL52Q86TS9 123 aaKnown RBP2.34□□□□□ -2.03
CDC42SE2-205ENST00000502840 STHQ8IWL8 128 aa2.34□□□□□ -2.03
CDC42SE2-205ENST00000502840 ORMDL3Q8N138 153 aa2.34□□□□□ -2.03
CDC42SE2-205ENST00000502840 DYNAPQ8N1N2 210 aa2.34□□□□□ -2.03
CDC42SE2-205ENST00000502840 NPBQ8NG41 125 aa2.34□□□□□ -2.03
CDC42SE2-205ENST00000502840 OR11H6Q8NGC7 330 aa2.34□□□□□ -2.03
CDC42SE2-205ENST00000502840 MRPL53Q96EL3 112 aaKnown RBP2.34□□□□□ -2.03
CDC42SE2-205ENST00000502840 METTL26Q96S19 204 aa2.34□□□□□ -2.03
CDC42SE2-205ENST00000502840 VPS25Q9BRG1 176 aa2.34□□□□□ -2.03
CDC42SE2-205ENST00000502840 MS4A6AQ9H2W1 248 aa2.34□□□□□ -2.03
CDC42SE2-205ENST00000502840 MAP1LC3AQ9H492 121 aa2.34□□□□□ -2.03
CDC42SE2-205ENST00000502840 SIGLEC8Q9NYZ4 499 aa2.34□□□□□ -2.03
CDC42SE2-205ENST00000502840 UFC1Q9Y3C8 167 aa2.34□□□□□ -2.03
CDC42SE2-205ENST00000502840 MRPS16Q9Y3D3 137 aaKnown RBP2.34□□□□□ -2.03
CDC42SE2-205ENST00000502840 SMAD5-AS1Q9Y6J3 95 aa2.34□□□□□ -2.03
CDC42SE2-205ENST00000502840 CHD9Q3L8U1 2897 aa2.34□□□□□ -2.04
CDC42SE2-205ENST00000502840 TRIOBPQ9H2D6 2365 aa2.34□□□□□ -2.04
CDC42SE2-205ENST00000502840 CACNA1DQ01668 2161 aa2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 RAI1Q7Z5J4 1906 aaPredicted RBP2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 IGLV11-55A0A075B6I3 123 aa2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 TRAV41A0A0B4J266 112 aa2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 IGHV3-38A0A0C4DH36 116 aa2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 TRBV6-1A0A0K0K1D8 114 aa2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 A0A1B0GXF2 115 aa2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 A6NDN8 102 aa2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 OOSP1A8MZH6 123 aa2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 EPM2AB3EWF7 344 aa2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 NPFFO15130 113 aa2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 CCL25O15444 150 aa2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 NDUFA3O95167 84 aa2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 HBDP02042 147 aa2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 CTRLP40313 264 aa2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 RAB9AP51151 201 aa2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 ZNF80P51504 273 aaPredicted RBP2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 UBE2E1P51965 193 aa2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 EFNA4P52798 201 aa2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 LOXL1Q08397 574 aaPredicted RBP2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 LDLRAD2Q5SZI1 272 aa2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 MINOS1Q5TGZ0 78 aa2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 Q6AWC8 147 aa2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 BRD3OSQ6XYD6 125 aa2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 GTSCR1Q86UQ5 136 aa2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 OR10J6PQ8NGY7 276 aa2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 DEFB104AQ8WTQ1 72 aa2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 ORAOV1Q8WV07 137 aa2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 TMEM158Q8WZ71 300 aa2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 IFI27L1Q96BM0 104 aa2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 FOXC2Q99958 501 aa2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 NAA38Q9BRA0 125 aaKnown RBP2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 AGPAT4-IT1Q9H0P7 198 aa2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 ST20Q9HBF5 79 aa2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 MINOS1-NBL1R4GNA1 71 aa2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 CHD7Q9P2D1 2997 aa2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 DIDO1Q9BTC0 2240 aaKnown RBP2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 URB1O60287 2271 aaKnown RBP2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 COL27A1Q8IZC6 1860 aaPredicted RBP2.33□□□□□ -2.04
CDC42SE2-205ENST00000502840 IGHV4-30-2A0A087WSY4 118 aa2.32□□□□□ -2.04
CDC42SE2-205ENST00000502840 TRBV7-1A0A0A6YYK4 115 aa2.32□□□□□ -2.04
CDC42SE2-205ENST00000502840 IGHV7-81A0A0B4J1V7 117 aa2.32□□□□□ -2.04
CDC42SE2-205ENST00000502840 IGHV2-70DA0A0C4DH43 119 aa2.32□□□□□ -2.04
CDC42SE2-205ENST00000502840 CENPVL3A0A0U1RRI6 287 aa2.32□□□□□ -2.04
CDC42SE2-205ENST00000502840 FBLL1A6NHQ2 334 aaKnown RBP2.32□□□□□ -2.04
CDC42SE2-205ENST00000502840 H3BUT2 72 aa2.32□□□□□ -2.04
CDC42SE2-205ENST00000502840 H7C423 109 aa2.32□□□□□ -2.04
CDC42SE2-205ENST00000502840 M0R381 172 aa2.32□□□□□ -2.04
CDC42SE2-205ENST00000502840 CD5LO43866 347 aa2.32□□□□□ -2.04
CDC42SE2-205ENST00000502840 NPYP01303 97 aa2.32□□□□□ -2.04
CDC42SE2-205ENST00000502840 SMIM17P0DL12 118 aa2.32□□□□□ -2.04
CDC42SE2-205ENST00000502840 HTN1P15515 57 aa2.32□□□□□ -2.04
CDC42SE2-205ENST00000502840 GATA1P15976 413 aaPredicted RBP2.32□□□□□ -2.04
CDC42SE2-205ENST00000502840 SAA4P35542 130 aa2.32□□□□□ -2.04
CDC42SE2-205ENST00000502840 HIST1H1AQ02539 215 aaPredicted RBP2.32□□□□□ -2.04
CDC42SE2-205ENST00000502840 PAX8Q06710 450 aa2.32□□□□□ -2.04
CDC42SE2-205ENST00000502840 PDE6HQ13956 83 aa2.32□□□□□ -2.04
CDC42SE2-205ENST00000502840 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.32□□□□□ -2.04
CDC42SE2-205ENST00000502840 GTF2H5Q6ZYL4 71 aa2.32□□□□□ -2.04
CDC42SE2-205ENST00000502840 Q8N9W7 124 aa2.32□□□□□ -2.04
CDC42SE2-205ENST00000502840 Q8NBF4 154 aa2.32□□□□□ -2.04
CDC42SE2-205ENST00000502840 OR1N2Q8NGR9 330 aa2.32□□□□□ -2.04
CDC42SE2-205ENST00000502840 SCGB3A1Q96QR1 104 aa2.32□□□□□ -2.04
CDC42SE2-205ENST00000502840 SLC50A1Q9BRV3 221 aa2.32□□□□□ -2.04
CDC42SE2-205ENST00000502840 BPESC1Q9GZL8 116 aa2.32□□□□□ -2.04
CDC42SE2-205ENST00000502840 TP73-AS1Q9UF72 201 aa2.32□□□□□ -2.04
CDC42SE2-205ENST00000502840 PHLDA3Q9Y5J5 127 aa2.32□□□□□ -2.04
CDC42SE2-205ENST00000502840 KNTC1P50748 2209 aa2.32□□□□□ -2.04
CDC42SE2-205ENST00000502840 TET2Q6N021 2002 aaPredicted RBP2.31□□□□□ -2.04
CDC42SE2-205ENST00000502840 TRAV8-6A0A0B4J262 113 aa2.31□□□□□ -2.04
CDC42SE2-205ENST00000502840 TRAV26-2A0A0B4J265 109 aa2.31□□□□□ -2.04
CDC42SE2-205ENST00000502840 TRAV40A0A0B4J280 105 aa2.31□□□□□ -2.04
CDC42SE2-205ENST00000502840 A0A0J9YWU9 116 aa2.31□□□□□ -2.04
CDC42SE2-205ENST00000502840 KRTAP16-1A8MUX0 517 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms