RNA–Protein interactions for RNA: ENST00000494284.6

PHF3-205, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-205ENST00000494284 IFI27L1Q96BM0 104 aa9.46□□□□□ -0.9
PHF3-205ENST00000494284 FLNAP21333 2647 aaKnown RBP9.46□□□□□ -0.9
PHF3-205ENST00000494284 TNFRSF6BO95407 300 aa9.45□□□□□ -0.9
PHF3-205ENST00000494284 HBDP02042 147 aa9.45□□□□□ -0.9
PHF3-205ENST00000494284 PRSS1P07477 247 aa9.45□□□□□ -0.9
PHF3-205ENST00000494284 ITPR2Q14571 2701 aa9.45□□□□□ -0.9
PHF3-205ENST00000494284 MTORP42345 2549 aa9.45□□□□□ -0.9
PHF3-205ENST00000494284 FBLL1A6NHQ2 334 aaKnown RBP9.45□□□□□ -0.9
PHF3-205ENST00000494284 K7EP13 123 aa9.45□□□□□ -0.9
PHF3-205ENST00000494284 GAGE1Q13065 139 aa9.45□□□□□ -0.9
PHF3-205ENST00000494284 RNASE8Q8TDE3 154 aaKnown RBP9.45□□□□□ -0.9
PHF3-205ENST00000494284 RNF223E7ERA6 249 aa9.45□□□□□ -0.9
PHF3-205ENST00000494284 SPANXN1Q5VSR9 72 aa9.45□□□□□ -0.9
PHF3-205ENST00000494284 AMMECR1LQ6DCA0 310 aa9.45□□□□□ -0.9
PHF3-205ENST00000494284 GPHB5Q86YW7 130 aa9.45□□□□□ -0.9
PHF3-205ENST00000494284 OR4C5Q8NGB2 326 aa9.45□□□□□ -0.9
PHF3-205ENST00000494284 C7orf71A4D174 169 aa9.44□□□□□ -0.9
PHF3-205ENST00000494284 TAX1BP3O14907 124 aa9.44□□□□□ -0.9
PHF3-205ENST00000494284 DEFB112Q30KQ8 113 aa9.44□□□□□ -0.9
PHF3-205ENST00000494284 C2orf91Q6ZV80 131 aa9.44□□□□□ -0.9
PHF3-205ENST00000494284 TGFAP01135 160 aa9.44□□□□□ -0.9
PHF3-205ENST00000494284 FOSL1P15407 271 aa9.44□□□□□ -0.9
PHF3-205ENST00000494284 C19orf54Q5BKX5 351 aa9.44□□□□□ -0.9
PHF3-205ENST00000494284 A0A1B0GW15 77 aa9.43□□□□□ -0.9
PHF3-205ENST00000494284 NDUFS8O00217 210 aa9.43□□□□□ -0.9
PHF3-205ENST00000494284 IGKV3-20P01619 116 aa9.43□□□□□ -0.9
PHF3-205ENST00000494284 RNF151Q2KHN1 245 aa9.43□□□□□ -0.9
PHF3-205ENST00000494284 ZNF843Q8N446 348 aa9.43□□□□□ -0.9
PHF3-205ENST00000494284 TMEM158Q8WZ71 300 aa9.43□□□□□ -0.9
PHF3-205ENST00000494284 MAP1LC3AQ9H492 121 aa9.43□□□□□ -0.9
PHF3-205ENST00000494284 IGKV2D-26A0A0A0MRZ7 120 aa9.42□□□□□ -0.9
PHF3-205ENST00000494284 COX8AP10176 69 aa9.42□□□□□ -0.9
PHF3-205ENST00000494284 HIST1H1AQ02539 215 aaPredicted RBP9.42□□□□□ -0.9
PHF3-205ENST00000494284 UBE2V1Q13404 147 aa9.42□□□□□ -0.9
PHF3-205ENST00000494284 OR4X2Q8NGF9 303 aa9.42□□□□□ -0.9
PHF3-205ENST00000494284 ORAOV1Q8WV07 137 aa9.42□□□□□ -0.9
PHF3-205ENST00000494284 U3KQK5 164 aa9.42□□□□□ -0.9
PHF3-205ENST00000494284 TRAV8-6A0A0B4J262 113 aa9.42□□□□□ -0.9
PHF3-205ENST00000494284 A6NDX4 124 aa9.42□□□□□ -0.9
PHF3-205ENST00000494284 GTSCR1Q86UQ5 136 aa9.42□□□□□ -0.9
PHF3-205ENST00000494284 PSMG3-AS1Q96PY0 264 aa9.42□□□□□ -0.9
PHF3-205ENST00000494284 FOXC2Q99958 501 aa9.42□□□□□ -0.9
PHF3-205ENST00000494284 TRBV7-1A0A0A6YYK4 115 aa9.42□□□□□ -0.9
PHF3-205ENST00000494284 RNASE4P34096 147 aaKnown RBP9.41□□□□□ -0.9
PHF3-205ENST00000494284 NEGR1Q7Z3B1 354 aa9.41□□□□□ -0.9
PHF3-205ENST00000494284 MEGF9Q9H1U4 602 aa9.41□□□□□ -0.9
PHF3-205ENST00000494284 TMEM160Q9NX00 188 aa9.41□□□□□ -0.9
PHF3-205ENST00000494284 GNRH2O43555 120 aa9.41□□□□□ -0.9
PHF3-205ENST00000494284 S100A4P26447 101 aaKnown RBP9.41□□□□□ -0.9
PHF3-205ENST00000494284 C14orf178Q8N769 122 aaPredicted RBP9.41□□□□□ -0.9
PHF3-205ENST00000494284 IGHV7-4-1A0A0J9YVY3 117 aa9.4□□□□□ -0.9
PHF3-205ENST00000494284 RPS20P60866 119 aaKnown RBP9.4□□□□□ -0.9
PHF3-205ENST00000494284 GATD1Q8NB37 220 aa9.4□□□□□ -0.9
PHF3-205ENST00000494284 SLC50A1Q9BRV3 221 aa9.4□□□□□ -0.9
PHF3-205ENST00000494284 CR1P17927 2039 aa9.4□□□□□ -0.9
PHF3-205ENST00000494284 HELZ2Q9BYK8 2649 aaKnown RBP9.4□□□□□ -0.9
PHF3-205ENST00000494284 LINC01559Q495D7 138 aa9.4□□□□□ -0.91
PHF3-205ENST00000494284 C12orf54Q6X4T0 127 aa9.4□□□□□ -0.91
PHF3-205ENST00000494284 BEX4Q9NWD9 120 aaPredicted RBP9.4□□□□□ -0.91
PHF3-205ENST00000494284 IGHG2P01859 326 aa9.39□□□□□ -0.91
PHF3-205ENST00000494284 MGPP08493 103 aa9.39□□□□□ -0.91
PHF3-205ENST00000494284 FGF6P10767 208 aa9.39□□□□□ -0.91
PHF3-205ENST00000494284 B4DSR2 109 aa9.39□□□□□ -0.91
PHF3-205ENST00000494284 RAB9AP51151 201 aa9.39□□□□□ -0.91
PHF3-205ENST00000494284 TMEM97Q5BJF2 176 aa9.39□□□□□ -0.91
PHF3-205ENST00000494284 C18orf65Q6ZTR6 163 aa9.39□□□□□ -0.91
PHF3-205ENST00000494284 DEFB125Q8N687 156 aa9.39□□□□□ -0.91
PHF3-205ENST00000494284 OR2K2Q8NGT1 345 aa9.39□□□□□ -0.91
PHF3-205ENST00000494284 RPL39LQ96EH5 51 aaKnown RBP9.39□□□□□ -0.91
PHF3-205ENST00000494284 MS4A6AQ9H2W1 248 aa9.39□□□□□ -0.91
PHF3-205ENST00000494284 COX6B1P14854 86 aa9.38□□□□□ -0.91
PHF3-205ENST00000494284 C2CD3Q4AC94 2353 aa9.38□□□□□ -0.91
PHF3-205ENST00000494284 DUX3Q96PT4 197 aa9.38□□□□□ -0.91
PHF3-205ENST00000494284 U3KQE9 123 aa9.38□□□□□ -0.91
PHF3-205ENST00000494284 JMJD1CQ15652 2540 aa9.38□□□□□ -0.91
PHF3-205ENST00000494284 H3BUT2 72 aa9.38□□□□□ -0.91
PHF3-205ENST00000494284 SMIM17P0DL12 118 aa9.38□□□□□ -0.91
PHF3-205ENST00000494284 DEFB136Q30KP8 78 aa9.38□□□□□ -0.91
PHF3-205ENST00000494284 RHPN1-AS1Q9BWJ2 59 aa9.38□□□□□ -0.91
PHF3-205ENST00000494284 JPT2Q9H910 190 aa9.38□□□□□ -0.91
PHF3-205ENST00000494284 LGALS9BQ3B8N2 356 aa9.37□□□□□ -0.91
PHF3-205ENST00000494284 ANXA2RQ3ZCQ2 193 aa9.37□□□□□ -0.91
PHF3-205ENST00000494284 ZC2HC1BQ5TFG8 222 aa9.37□□□□□ -0.91
PHF3-205ENST00000494284 LGALS9CQ6DKI2 356 aa9.37□□□□□ -0.91
PHF3-205ENST00000494284 A0A096LNT2 108 aa9.37□□□□□ -0.91
PHF3-205ENST00000494284 K7ERJ3 54 aa9.37□□□□□ -0.91
PHF3-205ENST00000494284 GCSHP23434 173 aa9.37□□□□□ -0.91
PHF3-205ENST00000494284 SMIM15Q7Z3B0 74 aa9.37□□□□□ -0.91
PHF3-205ENST00000494284 COX8CQ7Z4L0 72 aa9.37□□□□□ -0.91
PHF3-205ENST00000494284 MRPL35Q9NZE8 188 aaKnown RBP9.37□□□□□ -0.91
PHF3-205ENST00000494284 CD5LO43866 347 aa9.36□□□□□ -0.91
PHF3-205ENST00000494284 MUC4Q99102 2169 aa9.36□□□□□ -0.91
PHF3-205ENST00000494284 NACAE9PAV3 2078 aa9.36□□□□□ -0.91
PHF3-205ENST00000494284 FAM223BA6NKX1 122 aa9.36□□□□□ -0.91
PHF3-205ENST00000494284 EMP1P54849 157 aa9.36□□□□□ -0.91
PHF3-205ENST00000494284 ODF1Q14990 250 aa9.36□□□□□ -0.91
PHF3-205ENST00000494284 FAM223AQ8IWN6 122 aa9.36□□□□□ -0.91
PHF3-205ENST00000494284 OR10J6PQ8NGY7 276 aa9.36□□□□□ -0.91
PHF3-205ENST00000494284 NPFFR1Q9GZQ6 430 aa9.36□□□□□ -0.91
PHF3-205ENST00000494284 PHLDA3Q9Y5J5 127 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms