RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 P01737 135 aa6.02□□□□□ -1.45
USP4-210ENST00000483212 AMBPP02760 352 aa6.02□□□□□ -1.45
USP4-210ENST00000483212 GPX1P07203 203 aa6.02□□□□□ -1.45
USP4-210ENST00000483212 RNASE4P34096 147 aaKnown RBP6.02□□□□□ -1.45
USP4-210ENST00000483212 C15orf54Q8N8G6 183 aa6.02□□□□□ -1.45
USP4-210ENST00000483212 TUBA4BQ9H853 241 aa6.02□□□□□ -1.45
USP4-210ENST00000483212 IL36BQ9NZH7 164 aa6.02□□□□□ -1.45
USP4-210ENST00000483212 NBEAL1Q6ZS30 2694 aa6.01□□□□□ -1.45
USP4-210ENST00000483212 TRAV12-3A0A0B4J271 114 aa6.01□□□□□ -1.45
USP4-210ENST00000483212 SMIM27A0A1W2PRY6 76 aa6.01□□□□□ -1.45
USP4-210ENST00000483212 CXorf65A6NEN9 183 aa6.01□□□□□ -1.45
USP4-210ENST00000483212 ZNF705GA8MUZ8 300 aaPredicted RBP6.01□□□□□ -1.45
USP4-210ENST00000483212 A8MZ25 164 aa6.01□□□□□ -1.45
USP4-210ENST00000483212 CXCL1P09341 107 aa6.01□□□□□ -1.45
USP4-210ENST00000483212 IGHV4-30-4P0DP06 118 aa6.01□□□□□ -1.45
USP4-210ENST00000483212 RPL35AP18077 110 aaKnown RBP6.01□□□□□ -1.45
USP4-210ENST00000483212 TDRG1Q3Y452 100 aa6.01□□□□□ -1.45
USP4-210ENST00000483212 ANXA2RQ3ZCQ2 193 aa6.01□□□□□ -1.45
USP4-210ENST00000483212 TMEM88Q6PEY1 159 aa6.01□□□□□ -1.45
USP4-210ENST00000483212 MORN3Q6PF18 240 aaPredicted RBP6.01□□□□□ -1.45
USP4-210ENST00000483212 C1orf158Q8N1D5 194 aa6.01□□□□□ -1.45
USP4-210ENST00000483212 CSNK1G2-AS1Q8NCQ2 148 aa6.01□□□□□ -1.45
USP4-210ENST00000483212 OR2D3Q8NGH3 330 aa6.01□□□□□ -1.45
USP4-210ENST00000483212 TSKUQ8WUA8 353 aa6.01□□□□□ -1.45
USP4-210ENST00000483212 GTSF1Q8WW33 167 aa6.01□□□□□ -1.45
USP4-210ENST00000483212 DAZAP1Q96EP5 407 aaKnown RBP6.01□□□□□ -1.45
USP4-210ENST00000483212 IMMP2LQ96T52 175 aa6.01□□□□□ -1.45
USP4-210ENST00000483212 C20orf144Q9BQM9 153 aa6.01□□□□□ -1.45
USP4-210ENST00000483212 ZMAT5Q9UDW3 170 aaKnown RBP6.01□□□□□ -1.45
USP4-210ENST00000483212 MGAM2Q2M2H8 2515 aa6.01□□□□□ -1.45
USP4-210ENST00000483212 TMSB15BA0A087X1C1 80 aa6□□□□□ -1.45
USP4-210ENST00000483212 TMEM189A5PLL7 270 aa6□□□□□ -1.45
USP4-210ENST00000483212 INSP01308 110 aa6□□□□□ -1.45
USP4-210ENST00000483212 IGLC6P0CF74 106 aa6□□□□□ -1.45
USP4-210ENST00000483212 GZMBP10144 247 aa6□□□□□ -1.45
USP4-210ENST00000483212 FOXA3P55318 350 aaPredicted RBP6□□□□□ -1.45
USP4-210ENST00000483212 ELOBQ15370 118 aa6□□□□□ -1.45
USP4-210ENST00000483212 C4orf48Q5BLP8 95 aa6□□□□□ -1.45
USP4-210ENST00000483212 DNLZQ5SXM8 178 aa6□□□□□ -1.45
USP4-210ENST00000483212 NEU1Q99519 415 aa6□□□□□ -1.45
USP4-210ENST00000483212 PYGO2Q9BRQ0 406 aa6□□□□□ -1.45
USP4-210ENST00000483212 LINC00467Q9BRT7 94 aa6□□□□□ -1.45
USP4-210ENST00000483212 GFRA4Q9GZZ7 299 aa6□□□□□ -1.45
USP4-210ENST00000483212 SMCO4Q9NRQ5 59 aa6□□□□□ -1.45
USP4-210ENST00000483212 XCL2Q9UBD3 114 aa6□□□□□ -1.45
USP4-210ENST00000483212 NOTCH1P46531 2555 aa5.99□□□□□ -1.45
USP4-210ENST00000483212 LOC102724200A0A096LPH7 203 aaPredicted RBP5.99□□□□□ -1.45
USP4-210ENST00000483212 KIR2DL5BA0A0G2JN68 375 aa5.99□□□□□ -1.45
USP4-210ENST00000483212 KIR2DL5BA0A0G2JPC4 375 aa5.99□□□□□ -1.45
USP4-210ENST00000483212 GRIFINA4D1Z8 144 aa5.99□□□□□ -1.45
USP4-210ENST00000483212 FAM231BA6NCW3 169 aa5.99□□□□□ -1.45
USP4-210ENST00000483212 A8MWL6 223 aa5.99□□□□□ -1.45
USP4-210ENST00000483212 ORM1P02763 201 aa5.99□□□□□ -1.45
USP4-210ENST00000483212 TYMSP04818 313 aa5.99□□□□□ -1.45
USP4-210ENST00000483212 TCL1AP56279 114 aa5.99□□□□□ -1.45
USP4-210ENST00000483212 RPS20P60866 119 aaKnown RBP5.99□□□□□ -1.45
USP4-210ENST00000483212 NUTF2P61970 127 aaKnown RBP5.99□□□□□ -1.45
USP4-210ENST00000483212 MUC21Q5SSG8 566 aa5.99□□□□□ -1.45
USP4-210ENST00000483212 ZNF705AQ6ZN79 300 aaPredicted RBP5.99□□□□□ -1.45
USP4-210ENST00000483212 KIR2DL5AQ8N109 375 aa5.99□□□□□ -1.45
USP4-210ENST00000483212 KIR2DL5BQ8NHK3 375 aa5.99□□□□□ -1.45
USP4-210ENST00000483212 CSTL1Q9H114 145 aa5.99□□□□□ -1.45
USP4-210ENST00000483212 TP53TG3Q9ULZ0 132 aa5.99□□□□□ -1.45
USP4-210ENST00000483212 TRBV24-1A0A075B6N3 115 aa5.98□□□□□ -1.45
USP4-210ENST00000483212 IGHV1OR15-1A0A075B7D0 117 aa5.98□□□□□ -1.45
USP4-210ENST00000483212 IGHV3-16A0A0C4DH30 117 aa5.98□□□□□ -1.45
USP4-210ENST00000483212 COLCA2A8K830 154 aa5.98□□□□□ -1.45
USP4-210ENST00000483212 GNRH2O43555 120 aa5.98□□□□□ -1.45
USP4-210ENST00000483212 SNAI2O43623 268 aa5.98□□□□□ -1.45
USP4-210ENST00000483212 MED14OSP0DP75 135 aa5.98□□□□□ -1.45
USP4-210ENST00000483212 RNASE3P12724 160 aaKnown RBP5.98□□□□□ -1.45
USP4-210ENST00000483212 CTRLP40313 264 aa5.98□□□□□ -1.45
USP4-210ENST00000483212 FAM3BP58499 235 aaPredicted RBP5.98□□□□□ -1.45
USP4-210ENST00000483212 KRTAP5-3Q6L8H2 238 aa5.98□□□□□ -1.45
USP4-210ENST00000483212 NUP35Q8NFH5 326 aa5.98□□□□□ -1.45
USP4-210ENST00000483212 SSBP4Q9BWG4 385 aaPredicted RBP5.98□□□□□ -1.45
USP4-210ENST00000483212 C1QTNF4Q9BXJ3 329 aa5.98□□□□□ -1.45
USP4-210ENST00000483212 SCRT2Q9NQ03 307 aa5.98□□□□□ -1.45
USP4-210ENST00000483212 NAT8BQ9UHF3 227 aa5.98□□□□□ -1.45
USP4-210ENST00000483212 NAGKQ9UJ70 344 aa5.98□□□□□ -1.45
USP4-210ENST00000483212 URGCP-MRPS24S4R325 110 aa5.98□□□□□ -1.45
USP4-210ENST00000483212 TRAV9-1A0A075B6T8 112 aa5.97□□□□□ -1.45
USP4-210ENST00000483212 TGIF2-C20orf24A0A0A6YYL0 155 aa5.97□□□□□ -1.45
USP4-210ENST00000483212 A0A1B0GXF2 115 aa5.97□□□□□ -1.45
USP4-210ENST00000483212 HIGD1CA8MV81 97 aa5.97□□□□□ -1.45
USP4-210ENST00000483212 K7EIL1 84 aa5.97□□□□□ -1.45
USP4-210ENST00000483212 PRM2P04554 102 aa5.97□□□□□ -1.45
USP4-210ENST00000483212 FRMD6-AS1P0C7T7 363 aa5.97□□□□□ -1.45
USP4-210ENST00000483212 KCNIP4Q6PIL6 250 aa5.97□□□□□ -1.45
USP4-210ENST00000483212 FAM159AQ6UWV7 190 aa5.97□□□□□ -1.45
USP4-210ENST00000483212 TMEM256Q8N2U0 113 aa5.97□□□□□ -1.45
USP4-210ENST00000483212 FER1L6-AS1Q8NA97 138 aa5.97□□□□□ -1.45
USP4-210ENST00000483212 C11orf72Q8NBR9 251 aa5.97□□□□□ -1.45
USP4-210ENST00000483212 IL17DQ8TAD2 202 aa5.97□□□□□ -1.45
USP4-210ENST00000483212 KCNS1Q96KK3 526 aa5.97□□□□□ -1.45
USP4-210ENST00000483212 C9orf85Q96MD7 179 aa5.97□□□□□ -1.45
USP4-210ENST00000483212 CNFNQ9BYD5 112 aa5.97□□□□□ -1.45
USP4-210ENST00000483212 A0A1W2PPQ1 181 aa5.96□□□□□ -1.46
USP4-210ENST00000483212 XKRY2A2RUG3 117 aa5.96□□□□□ -1.46
USP4-210ENST00000483212 PRB2P02812 416 aaPredicted RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms