RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 ZNF256Q9Y2P7 627 aaPredicted RBP8.2□□□□□ -1.1
VTI1A-204ENST00000480057 SELENOKQ9Y6D0 94 aa8.2□□□□□ -1.1
VTI1A-204ENST00000480057 MTORP42345 2549 aa8.19□□□□□ -1.1
VTI1A-204ENST00000480057 GRIFINA4D1Z8 144 aa8.19□□□□□ -1.1
VTI1A-204ENST00000480057 IFITM10A6NMD0 228 aa8.19□□□□□ -1.1
VTI1A-204ENST00000480057 RNASE4P34096 147 aaKnown RBP8.19□□□□□ -1.1
VTI1A-204ENST00000480057 ASIPP42127 132 aa8.19□□□□□ -1.1
VTI1A-204ENST00000480057 DEFB131AP59861 70 aa8.19□□□□□ -1.1
VTI1A-204ENST00000480057 KRTAP10-3P60369 221 aa8.19□□□□□ -1.1
VTI1A-204ENST00000480057 TDRG1Q3Y452 100 aa8.19□□□□□ -1.1
VTI1A-204ENST00000480057 GFI1BQ5VTD9 330 aa8.19□□□□□ -1.1
VTI1A-204ENST00000480057 AMTNQ6UX39 209 aa8.19□□□□□ -1.1
VTI1A-204ENST00000480057 FAM110AQ9BQ89 295 aa8.19□□□□□ -1.1
VTI1A-204ENST00000480057 TMEM191AQ9H0A3 160 aa8.19□□□□□ -1.1
VTI1A-204ENST00000480057 H3BMM0 161 aa8.18□□□□□ -1.1
VTI1A-204ENST00000480057 IGLV1-51P01701 117 aa8.18□□□□□ -1.1
VTI1A-204ENST00000480057 SMIM6P0DI80 62 aa8.18□□□□□ -1.1
VTI1A-204ENST00000480057 TWIST1Q15672 202 aa8.18□□□□□ -1.1
VTI1A-204ENST00000480057 KIAA1644Q3SXP7 199 aa8.18□□□□□ -1.1
VTI1A-204ENST00000480057 FAM104BQ5XKR9 115 aa8.18□□□□□ -1.1
VTI1A-204ENST00000480057 BAGE3Q86Y29 109 aa8.18□□□□□ -1.1
VTI1A-204ENST00000480057 TMEM18Q96B42 140 aa8.18□□□□□ -1.1
VTI1A-204ENST00000480057 HIST1H2BLQ99880 126 aa8.18□□□□□ -1.1
VTI1A-204ENST00000480057 ZNF324O75467 553 aaPredicted RBP8.17□□□□□ -1.1
VTI1A-204ENST00000480057 AMBPP02760 352 aa8.17□□□□□ -1.1
VTI1A-204ENST00000480057 CD33P20138 364 aa8.17□□□□□ -1.1
VTI1A-204ENST00000480057 NTF3P20783 257 aa8.17□□□□□ -1.1
VTI1A-204ENST00000480057 NSUN5P1Q3KNT7 163 aa8.17□□□□□ -1.1
VTI1A-204ENST00000480057 ANXA2RQ3ZCQ2 193 aa8.17□□□□□ -1.1
VTI1A-204ENST00000480057 FAM159AQ6UWV7 190 aa8.17□□□□□ -1.1
VTI1A-204ENST00000480057 C18orf32Q8TCD1 76 aa8.17□□□□□ -1.1
VTI1A-204ENST00000480057 C20orf144Q9BQM9 153 aa8.17□□□□□ -1.1
VTI1A-204ENST00000480057 SCRT2Q9NQ03 307 aa8.17□□□□□ -1.1
VTI1A-204ENST00000480057 TP53TG3Q9ULZ0 132 aa8.17□□□□□ -1.1
VTI1A-204ENST00000480057 U3KQK5 164 aa8.17□□□□□ -1.1
VTI1A-204ENST00000480057 NSD1Q96L73 2696 aaPredicted RBP8.16□□□□□ -1.1
VTI1A-204ENST00000480057 SAP30O75446 220 aa8.16□□□□□ -1.1
VTI1A-204ENST00000480057 SERF1AO75920 110 aa8.16□□□□□ -1.1
VTI1A-204ENST00000480057 PPBPP02775 128 aa8.16□□□□□ -1.1
VTI1A-204ENST00000480057 HIST2H2BDQ6DRA6 164 aa8.16□□□□□ -1.1
VTI1A-204ENST00000480057 SMIM15Q7Z3B0 74 aa8.16□□□□□ -1.1
VTI1A-204ENST00000480057 LINC00518Q8N0U6 118 aa8.16□□□□□ -1.1
VTI1A-204ENST00000480057 TMEM256Q8N2U0 113 aa8.16□□□□□ -1.1
VTI1A-204ENST00000480057 LINC00482Q8N8I6 264 aa8.16□□□□□ -1.1
VTI1A-204ENST00000480057 NAGKQ9UJ70 344 aa8.16□□□□□ -1.1
VTI1A-204ENST00000480057 FN1P02751 2386 aaKnown RBP8.15□□□□□ -1.1
VTI1A-204ENST00000480057 HIVEP1P15822 2718 aa8.15□□□□□ -1.1
VTI1A-204ENST00000480057 KNCNA6PVL3 124 aa8.15□□□□□ -1.1
VTI1A-204ENST00000480057 J3KRW8 73 aa8.15□□□□□ -1.1
VTI1A-204ENST00000480057 NXPH4O95158 308 aa8.15□□□□□ -1.1
VTI1A-204ENST00000480057 PF4P02776 101 aa8.15□□□□□ -1.1
VTI1A-204ENST00000480057 FABP4P15090 132 aa8.15□□□□□ -1.1
VTI1A-204ENST00000480057 S100A4P26447 101 aaKnown RBP8.15□□□□□ -1.1
VTI1A-204ENST00000480057 INSL3P51460 131 aa8.15□□□□□ -1.1
VTI1A-204ENST00000480057 LINC00310P59036 64 aa8.15□□□□□ -1.1
VTI1A-204ENST00000480057 PDZD11Q5EBL8 140 aa8.15□□□□□ -1.1
VTI1A-204ENST00000480057 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.15□□□□□ -1.1
VTI1A-204ENST00000480057 CHCHD1Q96BP2 118 aaKnown RBP8.15□□□□□ -1.1
VTI1A-204ENST00000480057 CITED1Q99966 193 aa8.15□□□□□ -1.1
VTI1A-204ENST00000480057 LINC00467Q9BRT7 94 aa8.15□□□□□ -1.1
VTI1A-204ENST00000480057 LAMTOR2Q9Y2Q5 125 aa8.15□□□□□ -1.1
VTI1A-204ENST00000480057 TRAV12-3A0A0B4J271 114 aa8.14□□□□□ -1.11
VTI1A-204ENST00000480057 OR11H12B2RN74 326 aa8.14□□□□□ -1.11
VTI1A-204ENST00000480057 H3BVH4 76 aa8.14□□□□□ -1.11
VTI1A-204ENST00000480057 KIR3DS1Q14943 382 aa8.14□□□□□ -1.11
VTI1A-204ENST00000480057 SPINK13Q1W4C9 94 aa8.14□□□□□ -1.11
VTI1A-204ENST00000480057 BEAN1Q3B7T3 259 aa8.14□□□□□ -1.11
VTI1A-204ENST00000480057 ODF3L2Q3SX64 289 aa8.14□□□□□ -1.11
VTI1A-204ENST00000480057 SPANXN1Q5VSR9 72 aa8.14□□□□□ -1.11
VTI1A-204ENST00000480057 Q6ZQT7 251 aa8.14□□□□□ -1.11
VTI1A-204ENST00000480057 ORMDL3Q8N138 153 aa8.14□□□□□ -1.11
VTI1A-204ENST00000480057 OR10D4PQ8NGN7 298 aa8.14□□□□□ -1.11
VTI1A-204ENST00000480057 OR10AG1Q8NH19 301 aa8.14□□□□□ -1.11
VTI1A-204ENST00000480057 TRGV11A0A075B6L2 103 aa8.13□□□□□ -1.11
VTI1A-204ENST00000480057 IGHV1OR15-1A0A075B7D0 117 aa8.13□□□□□ -1.11
VTI1A-204ENST00000480057 M0R2Z0 102 aa8.13□□□□□ -1.11
VTI1A-204ENST00000480057 IGKV3-20P01619 116 aa8.13□□□□□ -1.11
VTI1A-204ENST00000480057 RNASE3P12724 160 aaKnown RBP8.13□□□□□ -1.11
VTI1A-204ENST00000480057 PMCHP20382 165 aa8.13□□□□□ -1.11
VTI1A-204ENST00000480057 MRPL51Q4U2R6 128 aaKnown RBP8.13□□□□□ -1.11
VTI1A-204ENST00000480057 MUC21Q5SSG8 566 aa8.13□□□□□ -1.11
VTI1A-204ENST00000480057 AMN1Q8IY45 258 aa8.13□□□□□ -1.11
VTI1A-204ENST00000480057 PHLDA3Q9Y5J5 127 aa8.13□□□□□ -1.11
VTI1A-204ENST00000480057 IGHV3-16A0A0C4DH30 117 aa8.12□□□□□ -1.11
VTI1A-204ENST00000480057 RBMY1BA6NDE4 496 aaKnown RBP8.12□□□□□ -1.11
VTI1A-204ENST00000480057 RBMY1EA6NEQ0 496 aaKnown RBP8.12□□□□□ -1.11
VTI1A-204ENST00000480057 CRXO43186 299 aaPredicted RBP8.12□□□□□ -1.11
VTI1A-204ENST00000480057 GNRH2O43555 120 aa8.12□□□□□ -1.11
VTI1A-204ENST00000480057 NUPR1O60356 82 aa8.12□□□□□ -1.11
VTI1A-204ENST00000480057 RBMY1DP0C7P1 496 aaKnown RBP8.12□□□□□ -1.11
VTI1A-204ENST00000480057 RAB4AP20338 218 aa8.12□□□□□ -1.11
VTI1A-204ENST00000480057 TRPT1Q86TN4 253 aaKnown RBP8.12□□□□□ -1.11
VTI1A-204ENST00000480057 RNF185Q96GF1 192 aa8.12□□□□□ -1.11
VTI1A-204ENST00000480057 C9orf85Q96MD7 179 aa8.12□□□□□ -1.11
VTI1A-204ENST00000480057 RCHY1Q96PM5 261 aa8.12□□□□□ -1.11
VTI1A-204ENST00000480057 SAMD10Q9BYL1 202 aa8.12□□□□□ -1.11
VTI1A-204ENST00000480057 MSRB1Q9NZV6 116 aa8.12□□□□□ -1.11
VTI1A-204ENST00000480057 TRAV12-2A0A075B6T6 113 aa8.11□□□□□ -1.11
VTI1A-204ENST00000480057 MUC21A0A0G2JKD1 596 aa8.11□□□□□ -1.11
VTI1A-204ENST00000480057 MUC21A0A140T8X8 626 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms