RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 IGKV1OR2-108A0A075B7D4 117 aa3.57□□□□□ -1.84
CCNL1-215ENST00000474539 D6R8Y8 96 aa3.57□□□□□ -1.84
CCNL1-215ENST00000474539 CTSGP08311 255 aa3.57□□□□□ -1.84
CCNL1-215ENST00000474539 BLCAPP62952 87 aa3.57□□□□□ -1.84
CCNL1-215ENST00000474539 RBMY1FQ15415 496 aaKnown RBP3.57□□□□□ -1.84
CCNL1-215ENST00000474539 DEFB114Q30KQ6 69 aa3.57□□□□□ -1.84
CCNL1-215ENST00000474539 LINC01551Q86U37 167 aa3.57□□□□□ -1.84
CCNL1-215ENST00000474539 LURAP1LQ8IV03 231 aa3.57□□□□□ -1.84
CCNL1-215ENST00000474539 CAMK2N2Q96S95 79 aa3.57□□□□□ -1.84
CCNL1-215ENST00000474539 EP300Q09472 2414 aaPredicted RBP3.57□□□□□ -1.84
CCNL1-215ENST00000474539 TRAV13-1A0A0B4J241 112 aa3.57□□□□□ -1.84
CCNL1-215ENST00000474539 A0A0J9YX75 114 aa3.57□□□□□ -1.84
CCNL1-215ENST00000474539 ETDCA0A1B0GVM5 59 aa3.57□□□□□ -1.84
CCNL1-215ENST00000474539 PRSS29PA6NIE9 313 aa3.57□□□□□ -1.84
CCNL1-215ENST00000474539 FSHBP01225 129 aa3.57□□□□□ -1.84
CCNL1-215ENST00000474539 C11orf68Q9H3H3 251 aaKnown RBP3.57□□□□□ -1.84
CCNL1-215ENST00000474539 MAP6D1Q9H9H5 199 aa3.57□□□□□ -1.84
CCNL1-215ENST00000474539 FOXA3P55318 350 aaPredicted RBP3.56□□□□□ -1.84
CCNL1-215ENST00000474539 UBE2WQ96B02 151 aa3.56□□□□□ -1.84
CCNL1-215ENST00000474539 FANCD2OSQ96PS1 177 aa3.56□□□□□ -1.84
CCNL1-215ENST00000474539 RNASE7Q9H1E1 156 aaKnown RBP3.56□□□□□ -1.84
CCNL1-215ENST00000474539 BRWD1Q9NSI6 2320 aa3.56□□□□□ -1.84
CCNL1-215ENST00000474539 CNOT1A5YKK6 2376 aaKnown RBP3.56□□□□□ -1.84
CCNL1-215ENST00000474539 TRBV7-3A0A075B6L6 115 aa3.56□□□□□ -1.84
CCNL1-215ENST00000474539 DEFB131BA0A096LNP1 70 aa3.56□□□□□ -1.84
CCNL1-215ENST00000474539 LTAP01374 205 aa3.56□□□□□ -1.84
CCNL1-215ENST00000474539 MDKP21741 143 aaPredicted RBP3.56□□□□□ -1.84
CCNL1-215ENST00000474539 BTCP35070 178 aa3.56□□□□□ -1.84
CCNL1-215ENST00000474539 GAGE6Q13070 117 aa3.56□□□□□ -1.84
CCNL1-215ENST00000474539 TAL2Q16559 108 aa3.56□□□□□ -1.84
CCNL1-215ENST00000474539 BVES-AS1Q5T3Y7 98 aa3.56□□□□□ -1.84
CCNL1-215ENST00000474539 LINC01006Q8NI28 216 aa3.56□□□□□ -1.84
CCNL1-215ENST00000474539 ZNF479Q96JC4 524 aa3.56□□□□□ -1.84
CCNL1-215ENST00000474539 C18orf15Q96N68 181 aa3.56□□□□□ -1.84
CCNL1-215ENST00000474539 VSIRQ9H7M9 311 aa3.56□□□□□ -1.84
CCNL1-215ENST00000474539 PLXND1Q9Y4D7 1925 aa3.56□□□□□ -1.84
CCNL1-215ENST00000474539 SPTBP11277 2137 aa3.56□□□□□ -1.84
CCNL1-215ENST00000474539 MYO7BQ6PIF6 2116 aa3.56□□□□□ -1.84
CCNL1-215ENST00000474539 IGLL5B9A064 214 aa3.56□□□□□ -1.84
CCNL1-215ENST00000474539 SLC17A3O00476 420 aa3.56□□□□□ -1.84
CCNL1-215ENST00000474539 C2orf66Q6UXQ4 117 aa3.56□□□□□ -1.84
CCNL1-215ENST00000474539 LAMTOR3Q9UHA4 124 aa3.56□□□□□ -1.84
CCNL1-215ENST00000474539 NIT1Q86X76 327 aa3.56□□□□□ -1.84
CCNL1-215ENST00000474539 NUP35Q8NFH5 326 aa3.56□□□□□ -1.84
CCNL1-215ENST00000474539 Q8TAT8 98 aa3.56□□□□□ -1.84
CCNL1-215ENST00000474539 FXYD5Q96DB9 178 aa3.56□□□□□ -1.84
CCNL1-215ENST00000474539 KLK9Q9UKQ9 250 aa3.56□□□□□ -1.84
CCNL1-215ENST00000474539 MUC6Q6W4X9 2439 aa3.56□□□□□ -1.84
CCNL1-215ENST00000474539 MUC22E2RYF6 1773 aaPredicted RBP3.56□□□□□ -1.84
CCNL1-215ENST00000474539 FER1L5A0AVI2 2057 aa3.56□□□□□ -1.84
CCNL1-215ENST00000474539 TP53BP1Q12888 1972 aaPredicted RBP3.55□□□□□ -1.84
CCNL1-215ENST00000474539 TEX22C9J3V5 150 aa3.55□□□□□ -1.84
CCNL1-215ENST00000474539 H7C2G1 150 aa3.55□□□□□ -1.84
CCNL1-215ENST00000474539 K7EQG2 157 aa3.55□□□□□ -1.84
CCNL1-215ENST00000474539 MMP23AO75900 390 aa3.55□□□□□ -1.84
CCNL1-215ENST00000474539 IGLV2-23P01705 113 aa3.55□□□□□ -1.84
CCNL1-215ENST00000474539 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.55□□□□□ -1.84
CCNL1-215ENST00000474539 ZNF702PQ9H963 129 aa3.55□□□□□ -1.84
CCNL1-215ENST00000474539 GSN-AS1Q9NRJ2 163 aa3.55□□□□□ -1.84
CCNL1-215ENST00000474539 ZNF106Q9H2Y7 1883 aaKnown RBP3.55□□□□□ -1.84
CCNL1-215ENST00000474539 KIF26AQ9ULI4 1882 aaPredicted RBP3.55□□□□□ -1.84
CCNL1-215ENST00000474539 LAMA3Q16787 3333 aa3.55□□□□□ -1.84
CCNL1-215ENST00000474539 NUP210LQ5VU65 1888 aa3.55□□□□□ -1.84
CCNL1-215ENST00000474539 Q8N976 141 aa3.55□□□□□ -1.84
CCNL1-215ENST00000474539 ZNF524Q96C55 264 aa3.55□□□□□ -1.84
CCNL1-215ENST00000474539 A0A087WWL8 130 aa3.55□□□□□ -1.84
CCNL1-215ENST00000474539 IGHV3-73A0A0B4J1V6 119 aa3.55□□□□□ -1.84
CCNL1-215ENST00000474539 IGHV1-58A0A0C4DH39 117 aa3.55□□□□□ -1.84
CCNL1-215ENST00000474539 LY6LH3BQJ8 138 aa3.55□□□□□ -1.84
CCNL1-215ENST00000474539 NDUFB1O75438 58 aa3.55□□□□□ -1.84
CCNL1-215ENST00000474539 AGPAT4-IT1Q9H0P7 198 aa3.55□□□□□ -1.84
CCNL1-215ENST00000474539 U3KQK5 164 aa3.55□□□□□ -1.84
CCNL1-215ENST00000474539 TRBV6-4A0A1B0GX49 114 aa3.55□□□□□ -1.84
CCNL1-215ENST00000474539 DEFB135Q30KP9 77 aa3.55□□□□□ -1.84
CCNL1-215ENST00000474539 DUX4L9Q6RFH8 374 aaPredicted RBP3.55□□□□□ -1.84
CCNL1-215ENST00000474539 ABCA4P78363 2273 aa3.55□□□□□ -1.84
CCNL1-215ENST00000474539 A0A1B0GVG6 124 aa3.54□□□□□ -1.84
CCNL1-215ENST00000474539 H0YGX0 51 aa3.54□□□□□ -1.84
CCNL1-215ENST00000474539 UBE2AP49459 152 aa3.54□□□□□ -1.84
CCNL1-215ENST00000474539 MIAQ16674 131 aa3.54□□□□□ -1.84
CCNL1-215ENST00000474539 TMEM61Q8N0U2 210 aa3.54□□□□□ -1.84
CCNL1-215ENST00000474539 GTSF1LQ9H1H1 148 aa3.54□□□□□ -1.84
CCNL1-215ENST00000474539 WFDC1Q9HC57 220 aa3.54□□□□□ -1.84
CCNL1-215ENST00000474539 TPRP12270 2363 aaKnown RBP3.54□□□□□ -1.84
CCNL1-215ENST00000474539 A4D1N5 150 aa3.54□□□□□ -1.84
CCNL1-215ENST00000474539 PDE6GP18545 87 aa3.54□□□□□ -1.84
CCNL1-215ENST00000474539 MDC1Q14676 2089 aaKnown RBP3.54□□□□□ -1.84
CCNL1-215ENST00000474539 MKI67P46013 3256 aaKnown RBP3.54□□□□□ -1.84
CCNL1-215ENST00000474539 RIF1Q5UIP0 2472 aaKnown RBP3.54□□□□□ -1.84
CCNL1-215ENST00000474539 CACNA1HO95180 2353 aa3.54□□□□□ -1.84
CCNL1-215ENST00000474539 NOTCH4Q99466 2003 aa3.54□□□□□ -1.84
CCNL1-215ENST00000474539 TRBV20-1A0A075B6N2 111 aa3.54□□□□□ -1.84
CCNL1-215ENST00000474539 PSMB8P28062 276 aa3.54□□□□□ -1.84
CCNL1-215ENST00000474539 UFSP1Q6NVU6 142 aa3.54□□□□□ -1.84
CCNL1-215ENST00000474539 Q6ZRM9 215 aa3.54□□□□□ -1.84
CCNL1-215ENST00000474539 GATD1Q8NB37 220 aa3.54□□□□□ -1.84
CCNL1-215ENST00000474539 EYSQ5T1H1 3165 aa3.54□□□□□ -1.84
CCNL1-215ENST00000474539 UTF1Q5T230 341 aa3.54□□□□□ -1.84
CCNL1-215ENST00000474539 CYTL1Q9NRR1 136 aa3.54□□□□□ -1.84
CCNL1-215ENST00000474539 TPSG1Q9NRR2 321 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms