RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 COPS9Q8WXC6 57 aa3.91□□□□□ -1.78
TMEM39A-206ENST00000473684 CYSTM1Q9H1C7 97 aa3.91□□□□□ -1.78
TMEM39A-206ENST00000473684 UNC13CQ8NB66 2214 aa3.91□□□□□ -1.78
TMEM39A-206ENST00000473684 COX6CP09669 75 aa3.9□□□□□ -1.78
TMEM39A-206ENST00000473684 PRCDQ00LT1 54 aa3.9□□□□□ -1.78
TMEM39A-206ENST00000473684 PAPPA-AS1Q5QFB9 102 aa3.9□□□□□ -1.78
TMEM39A-206ENST00000473684 PATE2Q6UY27 113 aa3.9□□□□□ -1.78
TMEM39A-206ENST00000473684 PRNTQ86SH4 94 aa3.9□□□□□ -1.78
TMEM39A-206ENST00000473684 CCL26Q9Y258 94 aa3.9□□□□□ -1.78
TMEM39A-206ENST00000473684 TRAV3A0A0B4J244 114 aa3.9□□□□□ -1.79
TMEM39A-206ENST00000473684 IGHV4-39P01824 125 aa3.9□□□□□ -1.79
TMEM39A-206ENST00000473684 SUB1P53999 127 aaKnown RBP eCLIP3.9□□□□□ -1.79
TMEM39A-206ENST00000473684 MRPS36P82909 103 aaKnown RBP3.9□□□□□ -1.79
TMEM39A-206ENST00000473684 DEFB110Q30KQ9 67 aa3.9□□□□□ -1.79
TMEM39A-206ENST00000473684 CXCL17Q6UXB2 119 aa3.9□□□□□ -1.79
TMEM39A-206ENST00000473684 LINC00305Q7Z4B0 112 aa3.9□□□□□ -1.79
TMEM39A-206ENST00000473684 FAM19A1Q7Z5A9 133 aa3.9□□□□□ -1.79
TMEM39A-206ENST00000473684 SLC25A45Q8N413 288 aa3.9□□□□□ -1.79
TMEM39A-206ENST00000473684 S1PR3Q99500 378 aa3.9□□□□□ -1.79
TMEM39A-206ENST00000473684 IGLV2-18A0A075B6J9 118 aa3.89□□□□□ -1.79
TMEM39A-206ENST00000473684 SMKR1H3BMG3 65 aa3.89□□□□□ -1.79
TMEM39A-206ENST00000473684 SYNJ2BPP57105 145 aa3.89□□□□□ -1.79
TMEM39A-206ENST00000473684 Q1RN00 199 aa3.89□□□□□ -1.79
TMEM39A-206ENST00000473684 PMS2CLQ68D20 193 aa3.89□□□□□ -1.79
TMEM39A-206ENST00000473684 THAP8Q8NA92 274 aa3.89□□□□□ -1.79
TMEM39A-206ENST00000473684 LRP4O75096 1905 aa3.89□□□□□ -1.79
TMEM39A-206ENST00000473684 DIDO1Q9BTC0 2240 aaKnown RBP3.89□□□□□ -1.79
TMEM39A-206ENST00000473684 TRBV7-1A0A0A6YYK4 115 aa3.89□□□□□ -1.79
TMEM39A-206ENST00000473684 KRTAP9-6A0A140TA67 174 aa3.89□□□□□ -1.79
TMEM39A-206ENST00000473684 KRTAP9-7A8MTY7 169 aa3.89□□□□□ -1.79
TMEM39A-206ENST00000473684 GP9P14770 177 aa3.89□□□□□ -1.79
TMEM39A-206ENST00000473684 RPS21P63220 83 aaKnown RBP3.89□□□□□ -1.79
TMEM39A-206ENST00000473684 PIK3CD-AS1Q5SR53 167 aa3.89□□□□□ -1.79
TMEM39A-206ENST00000473684 GUSBP11Q6P575 273 aa3.89□□□□□ -1.79
TMEM39A-206ENST00000473684 DAND5Q8N907 189 aa3.89□□□□□ -1.79
TMEM39A-206ENST00000473684 NFAM1Q8NET5 270 aaPredicted RBP3.89□□□□□ -1.79
TMEM39A-206ENST00000473684 RNF185Q96GF1 192 aa3.89□□□□□ -1.79
TMEM39A-206ENST00000473684 C16orf95Q9H693 158 aa3.89□□□□□ -1.79
TMEM39A-206ENST00000473684 ZNF71Q9NQZ8 489 aaPredicted RBP3.89□□□□□ -1.79
TMEM39A-206ENST00000473684 RTTNQ86VV8 2226 aa3.89□□□□□ -1.79
TMEM39A-206ENST00000473684 C1orf158Q8N1D5 194 aa3.89□□□□□ -1.79
TMEM39A-206ENST00000473684 SMCR5Q8TEV8 140 aa3.89□□□□□ -1.79
TMEM39A-206ENST00000473684 CNFNQ9BYD5 112 aa3.89□□□□□ -1.79
TMEM39A-206ENST00000473684 TET2Q6N021 2002 aaPredicted RBP3.89□□□□□ -1.79
TMEM39A-206ENST00000473684 SRCAPQ6ZRS2 3230 aa3.88□□□□□ -1.79
TMEM39A-206ENST00000473684 TRGV5A0A0B4J1U4 118 aa3.88□□□□□ -1.79
TMEM39A-206ENST00000473684 RNASE2P10153 161 aaKnown RBP3.88□□□□□ -1.79
TMEM39A-206ENST00000473684 HIST2H2BCQ6DN03 193 aa3.88□□□□□ -1.79
TMEM39A-206ENST00000473684 HIST2H2BDQ6DRA6 164 aa3.88□□□□□ -1.79
TMEM39A-206ENST00000473684 VKORC1L1Q8N0U8 176 aa3.88□□□□□ -1.79
TMEM39A-206ENST00000473684 LINC01561Q8N1V8 128 aa3.88□□□□□ -1.79
TMEM39A-206ENST00000473684 PROK2Q9HC23 129 aa3.88□□□□□ -1.79
TMEM39A-206ENST00000473684 TMEM14CQ9P0S9 112 aa3.88□□□□□ -1.79
TMEM39A-206ENST00000473684 ZNF407Q9C0G0 2248 aa3.88□□□□□ -1.79
TMEM39A-206ENST00000473684 CEP350Q5VT06 3117 aa3.88□□□□□ -1.79
TMEM39A-206ENST00000473684 ESPL1Q14674 2120 aa3.88□□□□□ -1.79
TMEM39A-206ENST00000473684 TMEM223A0PJW6 202 aa3.88□□□□□ -1.79
TMEM39A-206ENST00000473684 LST1O00453 97 aa3.88□□□□□ -1.79
TMEM39A-206ENST00000473684 SPINT2O43291 252 aa3.88□□□□□ -1.79
TMEM39A-206ENST00000473684 FAM201AQ5SY85 155 aa3.88□□□□□ -1.79
TMEM39A-206ENST00000473684 LCE4AQ5TA78 99 aa3.88□□□□□ -1.79
TMEM39A-206ENST00000473684 IL17RELQ6ZVW7 336 aa3.88□□□□□ -1.79
TMEM39A-206ENST00000473684 ZCCHC24Q8N2G6 241 aaKnown RBP3.88□□□□□ -1.79
TMEM39A-206ENST00000473684 TMEM89A2RUT3 159 aa3.87□□□□□ -1.79
TMEM39A-206ENST00000473684 LINC00205P59089 165 aa3.87□□□□□ -1.79
TMEM39A-206ENST00000473684 CD164Q04900 197 aa3.87□□□□□ -1.79
TMEM39A-206ENST00000473684 ORMDL2Q53FV1 153 aa3.87□□□□□ -1.79
TMEM39A-206ENST00000473684 FAM53AQ6NSI3 398 aaPredicted RBP3.87□□□□□ -1.79
TMEM39A-206ENST00000473684 COX8CQ7Z4L0 72 aa3.87□□□□□ -1.79
TMEM39A-206ENST00000473684 LYPD1Q8N2G4 141 aa3.87□□□□□ -1.79
TMEM39A-206ENST00000473684 DCANP1Q8TF63 244 aa3.87□□□□□ -1.79
TMEM39A-206ENST00000473684 SS18L1O75177 396 aaPredicted RBP3.87□□□□□ -1.79
TMEM39A-206ENST00000473684 CRIP1P50238 77 aa3.87□□□□□ -1.79
TMEM39A-206ENST00000473684 FHL2Q14192 279 aa3.87□□□□□ -1.79
TMEM39A-206ENST00000473684 PLGLAQ15195 96 aa3.87□□□□□ -1.79
TMEM39A-206ENST00000473684 C16orf47Q6ZP98 133 aaPredicted RBP3.87□□□□□ -1.79
TMEM39A-206ENST00000473684 BRK1Q8WUW1 75 aa3.87□□□□□ -1.79
TMEM39A-206ENST00000473684 CABIN1Q9Y6J0 2220 aa3.87□□□□□ -1.79
TMEM39A-206ENST00000473684 KNCNA6PVL3 124 aa3.87□□□□□ -1.79
TMEM39A-206ENST00000473684 C10orf142B7Z368 130 aa3.87□□□□□ -1.79
TMEM39A-206ENST00000473684 PMAIP1Q13794 54 aa3.87□□□□□ -1.79
TMEM39A-206ENST00000473684 WFDC11Q8NEX6 87 aa3.87□□□□□ -1.79
TMEM39A-206ENST00000473684 TOMM6Q96B49 74 aa3.87□□□□□ -1.79
TMEM39A-206ENST00000473684 SCGB3A1Q96QR1 104 aa3.87□□□□□ -1.79
TMEM39A-206ENST00000473684 TMEM243Q9BU79 118 aa3.87□□□□□ -1.79
TMEM39A-206ENST00000473684 KRTAP9-2Q9BYQ4 174 aa3.87□□□□□ -1.79
TMEM39A-206ENST00000473684 MAP6D1Q9H9H5 199 aa3.87□□□□□ -1.79
TMEM39A-206ENST00000473684 ICOSQ9Y6W8 199 aa3.87□□□□□ -1.79
TMEM39A-206ENST00000473684 CACNA1DQ01668 2161 aa3.86□□□□□ -1.79
TMEM39A-206ENST00000473684 IGKV1D-37A0A075B6S9 117 aa3.86□□□□□ -1.79
TMEM39A-206ENST00000473684 A0A0U1RQV1 116 aa3.86□□□□□ -1.79
TMEM39A-206ENST00000473684 H7C2G1 150 aa3.86□□□□□ -1.79
TMEM39A-206ENST00000473684 LYZL6O75951 148 aa3.86□□□□□ -1.79
TMEM39A-206ENST00000473684 INAFM2P0DMQ5 153 aa3.86□□□□□ -1.79
TMEM39A-206ENST00000473684 GFERP55789 205 aa3.86□□□□□ -1.79
TMEM39A-206ENST00000473684 ERHP84090 104 aaKnown RBP3.86□□□□□ -1.79
TMEM39A-206ENST00000473684 FAM216BQ8N7L0 139 aa3.86□□□□□ -1.79
TMEM39A-206ENST00000473684 TIMM21Q9BVV7 248 aa3.86□□□□□ -1.79
TMEM39A-206ENST00000473684 LAMTOR3Q9UHA4 124 aa3.86□□□□□ -1.79
TMEM39A-206ENST00000473684 TRIOBPQ9H2D6 2365 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms