RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 STRAPQ9Y3F4 350 aaKnown RBP9.68□□□□□ -0.86
SF3B4-202ENST00000457312 A0A096LNI7 61 aa9.67□□□□□ -0.86
SF3B4-202ENST00000457312 GOSR2O14653 212 aa9.67□□□□□ -0.86
SF3B4-202ENST00000457312 IFNA7P01567 189 aa9.67□□□□□ -0.86
SF3B4-202ENST00000457312 PDE6HQ13956 83 aa9.67□□□□□ -0.86
SF3B4-202ENST00000457312 ZNF506Q5JVG8 444 aa9.67□□□□□ -0.86
SF3B4-202ENST00000457312 CLPSL2Q6UWE3 100 aa9.67□□□□□ -0.86
SF3B4-202ENST00000457312 C14orf178Q8N769 122 aaPredicted RBP9.67□□□□□ -0.86
SF3B4-202ENST00000457312 SLC39A9Q9NUM3 307 aa9.67□□□□□ -0.86
SF3B4-202ENST00000457312 LOC100506127A0A0U1RQW1 187 aa9.66□□□□□ -0.86
SF3B4-202ENST00000457312 DIRC3C9JPN6 131 aa9.66□□□□□ -0.86
SF3B4-202ENST00000457312 TMEM262E9PQX1 116 aa9.66□□□□□ -0.86
SF3B4-202ENST00000457312 FGF8P55075 233 aaPredicted RBP9.66□□□□□ -0.86
SF3B4-202ENST00000457312 FAAP20Q6NZ36 180 aa9.66□□□□□ -0.86
SF3B4-202ENST00000457312 OR2T35Q8NGX2 323 aa9.66□□□□□ -0.86
SF3B4-202ENST00000457312 PARLQ9H300 379 aa9.66□□□□□ -0.86
SF3B4-202ENST00000457312 PRR34Q9NV39 138 aa9.66□□□□□ -0.86
SF3B4-202ENST00000457312 GPR132Q9UNW8 380 aa9.66□□□□□ -0.86
SF3B4-202ENST00000457312 TIMM9Q9Y5J7 89 aa9.66□□□□□ -0.86
SF3B4-202ENST00000457312 IGLV10-54A0A075B6I4 117 aa9.65□□□□□ -0.86
SF3B4-202ENST00000457312 SRPXP78539 464 aa9.65□□□□□ -0.86
SF3B4-202ENST00000457312 AAMDCQ9H7C9 122 aa9.65□□□□□ -0.86
SF3B4-202ENST00000457312 SDF2L1Q9HCN8 221 aa9.65□□□□□ -0.86
SF3B4-202ENST00000457312 NPVFQ9HCQ7 196 aa9.65□□□□□ -0.86
SF3B4-202ENST00000457312 RAB3DO95716 219 aa9.64□□□□□ -0.87
SF3B4-202ENST00000457312 OR10G7Q8NGN6 311 aa9.64□□□□□ -0.87
SF3B4-202ENST00000457312 KCNIP3Q9Y2W7 256 aa9.64□□□□□ -0.87
SF3B4-202ENST00000457312 A0A087WWL8 130 aa9.63□□□□□ -0.87
SF3B4-202ENST00000457312 PGPEP1LA6NFU8 196 aa9.63□□□□□ -0.87
SF3B4-202ENST00000457312 FAM24AA6NFZ4 105 aa9.63□□□□□ -0.87
SF3B4-202ENST00000457312 FNDC10F2Z333 226 aa9.63□□□□□ -0.87
SF3B4-202ENST00000457312 PYYP10082 97 aa9.63□□□□□ -0.87
SF3B4-202ENST00000457312 IZUMO2Q6UXV1 221 aa9.63□□□□□ -0.87
SF3B4-202ENST00000457312 ZFP2Q6ZN57 461 aa9.63□□□□□ -0.87
SF3B4-202ENST00000457312 CDIP1Q9H305 208 aa9.63□□□□□ -0.87
SF3B4-202ENST00000457312 SMIM31A0A1B0GVY4 71 aa9.62□□□□□ -0.87
SF3B4-202ENST00000457312 KRTAP1-4P0C5Y4 121 aa9.62□□□□□ -0.87
SF3B4-202ENST00000457312 CROCCP3Q8IVE0 287 aa9.62□□□□□ -0.87
SF3B4-202ENST00000457312 FER1L6-AS1Q8NA97 138 aa9.62□□□□□ -0.87
SF3B4-202ENST00000457312 C9orf85Q96MD7 179 aa9.62□□□□□ -0.87
SF3B4-202ENST00000457312 MGST2Q99735 147 aa9.62□□□□□ -0.87
SF3B4-202ENST00000457312 TMEM14CQ9P0S9 112 aa9.62□□□□□ -0.87
SF3B4-202ENST00000457312 MTFP1Q9UDX5 166 aa9.62□□□□□ -0.87
SF3B4-202ENST00000457312 TSPAN13O95857 204 aa9.61□□□□□ -0.87
SF3B4-202ENST00000457312 SLC25A6P12236 298 aa9.61□□□□□ -0.87
SF3B4-202ENST00000457312 TGFBR1P36897 503 aa9.61□□□□□ -0.87
SF3B4-202ENST00000457312 OR2G3Q8NGZ4 309 aa9.61□□□□□ -0.87
SF3B4-202ENST00000457312 DIRC1Q969H9 104 aa9.61□□□□□ -0.87
SF3B4-202ENST00000457312 CCDC59Q9P031 241 aaKnown RBP9.61□□□□□ -0.87
SF3B4-202ENST00000457312 TRAV1-1A0A0B4J248 108 aa9.6□□□□□ -0.87
SF3B4-202ENST00000457312 APOA1P02647 267 aa9.6□□□□□ -0.87
SF3B4-202ENST00000457312 TAS2R19P59542 299 aa9.6□□□□□ -0.87
SF3B4-202ENST00000457312 UFSP1Q6NVU6 142 aa9.6□□□□□ -0.87
SF3B4-202ENST00000457312 TMEM229BQ8NBD8 167 aa9.6□□□□□ -0.87
SF3B4-202ENST00000457312 ASB13Q8WXK3 278 aa9.6□□□□□ -0.87
SF3B4-202ENST00000457312 PTH2Q96A98 100 aa9.6□□□□□ -0.87
SF3B4-202ENST00000457312 MGAT4CQ9UBM8 478 aa9.6□□□□□ -0.87
SF3B4-202ENST00000457312 LENEPQ9Y5L5 61 aa9.6□□□□□ -0.87
SF3B4-202ENST00000457312 SSPOA2VEC9 5147 aa9.59□□□□□ -0.87
SF3B4-202ENST00000457312 DUXBA0A1W2PPF3 345 aa9.59□□□□□ -0.87
SF3B4-202ENST00000457312 RBAKDNA6NC62 111 aa9.59□□□□□ -0.87
SF3B4-202ENST00000457312 CRYGAP11844 174 aa9.59□□□□□ -0.87
SF3B4-202ENST00000457312 RPS10P46783 165 aaKnown RBP9.59□□□□□ -0.87
SF3B4-202ENST00000457312 KCNS1Q96KK3 526 aa9.59□□□□□ -0.87
SF3B4-202ENST00000457312 GFRA4Q9GZZ7 299 aa9.59□□□□□ -0.87
SF3B4-202ENST00000457312 VCXQ9H320 206 aa9.59□□□□□ -0.87
SF3B4-202ENST00000457312 TRAV21A0A0B4J279 112 aa9.58□□□□□ -0.88
SF3B4-202ENST00000457312 H0Y9J4 135 aa9.58□□□□□ -0.88
SF3B4-202ENST00000457312 TPRXLQ17RH7 258 aa9.58□□□□□ -0.88
SF3B4-202ENST00000457312 LINC00269Q8N2A0 174 aa9.58□□□□□ -0.88
SF3B4-202ENST00000457312 BLOC1S6Q9UL45 172 aa9.58□□□□□ -0.88
SF3B4-202ENST00000457312 RPL13AP40429 203 aaKnown RBP9.57□□□□□ -0.88
SF3B4-202ENST00000457312 UBE2D1P51668 147 aa9.57□□□□□ -0.88
SF3B4-202ENST00000457312 AQP4P55087 323 aa9.57□□□□□ -0.88
SF3B4-202ENST00000457312 C15orf56Q8N910 161 aa9.57□□□□□ -0.88
SF3B4-202ENST00000457312 SUN5Q8TC36 379 aa9.57□□□□□ -0.88
SF3B4-202ENST00000457312 KRTAP4-1Q9BYQ7 146 aa9.57□□□□□ -0.88
SF3B4-202ENST00000457312 GPN1Q9HCN4 374 aaPredicted RBP9.57□□□□□ -0.88
SF3B4-202ENST00000457312 LINC00474Q9P2X8 69 aa9.57□□□□□ -0.88
SF3B4-202ENST00000457312 TRBV6-8A0A0A6YYG3 113 aa9.56□□□□□ -0.88
SF3B4-202ENST00000457312 MT-ND6P03923 174 aa9.56□□□□□ -0.88
SF3B4-202ENST00000457312 METTL15P1P0C7V9 234 aa9.56□□□□□ -0.88
SF3B4-202ENST00000457312 MIC13Q5XKP0 118 aa9.56□□□□□ -0.88
SF3B4-202ENST00000457312 OR1L4Q8NGR5 311 aa9.56□□□□□ -0.88
SF3B4-202ENST00000457312 PSENENQ9NZ42 101 aa9.56□□□□□ -0.88
SF3B4-202ENST00000457312 COMMD3Q9UBI1 195 aa9.56□□□□□ -0.88
SF3B4-202ENST00000457312 A8MWV9 139 aa9.55□□□□□ -0.88
SF3B4-202ENST00000457312 F6UZH7 168 aa9.55□□□□□ -0.88
SF3B4-202ENST00000457312 LORP23490 312 aaPredicted RBP9.55□□□□□ -0.88
SF3B4-202ENST00000457312 RPS19P39019 145 aaKnown RBP9.55□□□□□ -0.88
SF3B4-202ENST00000457312 C1orf137Q5JT78 98 aa9.55□□□□□ -0.88
SF3B4-202ENST00000457312 LCE2CQ5TA81 110 aa9.55□□□□□ -0.88
SF3B4-202ENST00000457312 TMEM14EPQ6UXP3 125 aa9.55□□□□□ -0.88
SF3B4-202ENST00000457312 Q6ZRG5 221 aa9.55□□□□□ -0.88
SF3B4-202ENST00000457312 PFDN5Q99471 154 aa9.55□□□□□ -0.88
SF3B4-202ENST00000457312 JPT2Q9H910 190 aa9.55□□□□□ -0.88
SF3B4-202ENST00000457312 SYNE2Q8WXH0 6885 aaKnown RBP9.55□□□□□ -0.88
SF3B4-202ENST00000457312 CFC1BP0CG36 223 aa9.54□□□□□ -0.88
SF3B4-202ENST00000457312 ANXA3P12429 323 aa9.54□□□□□ -0.88
SF3B4-202ENST00000457312 UBE2D3P61077 147 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms