RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 SAMD13Q5VXD3 122 aa10.88□□□□□ -0.67
ERCC3-203ENST00000445889 CCDC144NLQ6NUI1 221 aa10.88□□□□□ -0.67
ERCC3-203ENST00000445889 RPL39LQ96EH5 51 aaKnown RBP10.88□□□□□ -0.67
ERCC3-203ENST00000445889 TSSC4Q9Y5U2 329 aaPredicted RBP10.88□□□□□ -0.67
ERCC3-203ENST00000445889 M0R1W7 72 aa10.88□□□□□ -0.67
ERCC3-203ENST00000445889 SCGB2A1O75556 95 aa10.88□□□□□ -0.67
ERCC3-203ENST00000445889 EMP1P54849 157 aa10.88□□□□□ -0.67
ERCC3-203ENST00000445889 C12orf74Q32Q52 190 aa10.88□□□□□ -0.67
ERCC3-203ENST00000445889 PIFOQ8TCI5 191 aa10.88□□□□□ -0.67
ERCC3-203ENST00000445889 TM2D2Q9BX73 214 aa10.88□□□□□ -0.67
ERCC3-203ENST00000445889 F6UB75 175 aa10.87□□□□□ -0.67
ERCC3-203ENST00000445889 SAA4P35542 130 aa10.87□□□□□ -0.67
ERCC3-203ENST00000445889 RPL11P62913 178 aaKnown RBP10.87□□□□□ -0.67
ERCC3-203ENST00000445889 C14orf178Q8N769 122 aaPredicted RBP10.87□□□□□ -0.67
ERCC3-203ENST00000445889 C16orf92Q96LL3 132 aa10.87□□□□□ -0.67
ERCC3-203ENST00000445889 CSMD2Q7Z408 3487 aa10.87□□□□□ -0.67
ERCC3-203ENST00000445889 LINC01546A6NGU7 62 aa10.87□□□□□ -0.67
ERCC3-203ENST00000445889 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.87□□□□□ -0.67
ERCC3-203ENST00000445889 C20orf173Q96LM9 149 aa10.87□□□□□ -0.67
ERCC3-203ENST00000445889 CYSLTR1Q9Y271 337 aa10.87□□□□□ -0.67
ERCC3-203ENST00000445889 CELSR2Q9HCU4 2923 aa10.86□□□□□ -0.67
ERCC3-203ENST00000445889 TRBV12-3P01733 135 aa10.86□□□□□ -0.67
ERCC3-203ENST00000445889 FOXI2Q6ZQN5 318 aa10.86□□□□□ -0.67
ERCC3-203ENST00000445889 SMPXQ9UHP9 88 aa10.86□□□□□ -0.67
ERCC3-203ENST00000445889 A0A087WX48 190 aa10.86□□□□□ -0.67
ERCC3-203ENST00000445889 E9PLD3 99 aa10.86□□□□□ -0.67
ERCC3-203ENST00000445889 SRD5A1P18405 259 aa10.85□□□□□ -0.67
ERCC3-203ENST00000445889 INSL3P51460 131 aa10.85□□□□□ -0.67
ERCC3-203ENST00000445889 SRSF1Q07955 248 aaKnown RBP eCLIP10.85□□□□□ -0.675e-7■■□□□ 14
ERCC3-203ENST00000445889 SPTBN4Q9H254 2564 aa10.85□□□□□ -0.67
ERCC3-203ENST00000445889 HIVEP3Q5T1R4 2406 aa10.85□□□□□ -0.67
ERCC3-203ENST00000445889 MGPP08493 103 aa10.85□□□□□ -0.67
ERCC3-203ENST00000445889 SORL1Q92673 2214 aa10.85□□□□□ -0.67
ERCC3-203ENST00000445889 CREBBPQ92793 2442 aa10.85□□□□□ -0.67
ERCC3-203ENST00000445889 ADORA2A-AS1P86434 159 aa10.85□□□□□ -0.67
ERCC3-203ENST00000445889 SRSF2Q01130 221 aaKnown RBP10.85□□□□□ -0.67
ERCC3-203ENST00000445889 UNQ9165/PRO28630Q6UXU0 137 aa10.85□□□□□ -0.67
ERCC3-203ENST00000445889 METTL26Q96S19 204 aa10.85□□□□□ -0.67
ERCC3-203ENST00000445889 S100A4P26447 101 aaKnown RBP10.84□□□□□ -0.67
ERCC3-203ENST00000445889 SPANXB1Q9NS25 103 aaPredicted RBP10.84□□□□□ -0.67
ERCC3-203ENST00000445889 GNRH2O43555 120 aa10.84□□□□□ -0.67
ERCC3-203ENST00000445889 IGHV3-11P01762 117 aa10.84□□□□□ -0.67
ERCC3-203ENST00000445889 FAM110DQ8TAY7 271 aaPredicted RBP10.84□□□□□ -0.67
ERCC3-203ENST00000445889 SCGB3A1Q96QR1 104 aa10.84□□□□□ -0.67
ERCC3-203ENST00000445889 AJUBAQ96IF1 538 aa10.83□□□□□ -0.68
ERCC3-203ENST00000445889 SIGMAR1Q99720 223 aa10.83□□□□□ -0.68
ERCC3-203ENST00000445889 GAGE12HA6NDE8 117 aa10.83□□□□□ -0.68
ERCC3-203ENST00000445889 SCGB2A2Q13296 93 aa10.83□□□□□ -0.68
ERCC3-203ENST00000445889 KLHL30-AS1Q8NEE0 82 aa10.83□□□□□ -0.68
ERCC3-203ENST00000445889 SPAG8Q99932 426 aaPredicted RBP10.83□□□□□ -0.68
ERCC3-203ENST00000445889 SLC50A1Q9BRV3 221 aa10.83□□□□□ -0.68
ERCC3-203ENST00000445889 CSPG4Q6UVK1 2322 aa10.82□□□□□ -0.68
ERCC3-203ENST00000445889 OR11H12B2RN74 326 aa10.82□□□□□ -0.68
ERCC3-203ENST00000445889 OR11H1Q8NG94 326 aa10.82□□□□□ -0.68
ERCC3-203ENST00000445889 OR11H2Q8NH07 326 aa10.82□□□□□ -0.68
ERCC3-203ENST00000445889 CHTOPQ9Y3Y2 248 aaKnown RBP10.82□□□□□ -0.68
ERCC3-203ENST00000445889 ATP5G2Q06055 141 aa10.82□□□□□ -0.68
ERCC3-203ENST00000445889 EBI3Q14213 229 aa10.82□□□□□ -0.68
ERCC3-203ENST00000445889 BRD3OSQ6XYD6 125 aa10.82□□□□□ -0.68
ERCC3-203ENST00000445889 SIRPDQ9H106 197 aa10.82□□□□□ -0.68
ERCC3-203ENST00000445889 UBTD1Q9HAC8 227 aa10.82□□□□□ -0.68
ERCC3-203ENST00000445889 F8W1H4 67 aa10.81□□□□□ -0.68
ERCC3-203ENST00000445889 K7ENP7 123 aa10.81□□□□□ -0.68
ERCC3-203ENST00000445889 RNASE4P34096 147 aaKnown RBP10.81□□□□□ -0.68
ERCC3-203ENST00000445889 GAGE13Q4V321 117 aa10.81□□□□□ -0.68
ERCC3-203ENST00000445889 SMIM2Q9BVW6 85 aa10.81□□□□□ -0.68
ERCC3-203ENST00000445889 RBAKDNA6NC62 111 aa10.81□□□□□ -0.68
ERCC3-203ENST00000445889 F8VRH5 84 aa10.81□□□□□ -0.68
ERCC3-203ENST00000445889 H7C1H1 209 aa10.81□□□□□ -0.68
ERCC3-203ENST00000445889 PLNP26678 52 aa10.81□□□□□ -0.68
ERCC3-203ENST00000445889 C11orf71Q6IPW1 123 aa10.81□□□□□ -0.68
ERCC3-203ENST00000445889 RASL10AQ92737 203 aa10.81□□□□□ -0.68
ERCC3-203ENST00000445889 DOPEY2Q9Y3R5 2298 aa10.81□□□□□ -0.68
ERCC3-203ENST00000445889 PSMG4Q5JS54 123 aa10.81□□□□□ -0.68
ERCC3-203ENST00000445889 JPT2Q9H910 190 aa10.81□□□□□ -0.68
ERCC3-203ENST00000445889 MYMXA0A1B0GTQ4 84 aa10.8□□□□□ -0.68
ERCC3-203ENST00000445889 CD300EQ496F6 205 aaPredicted RBP10.8□□□□□ -0.68
ERCC3-203ENST00000445889 EEF1AKMT3Q96AZ1 226 aa10.8□□□□□ -0.68
ERCC3-203ENST00000445889 BPESC1Q9GZL8 116 aa10.8□□□□□ -0.68
ERCC3-203ENST00000445889 EDN2P20800 178 aa10.8□□□□□ -0.68
ERCC3-203ENST00000445889 ARL3P36405 182 aa10.8□□□□□ -0.68
ERCC3-203ENST00000445889 RRN3P1Q2M238 152 aa10.8□□□□□ -0.68
ERCC3-203ENST00000445889 ANXA2RQ3ZCQ2 193 aa10.8□□□□□ -0.68
ERCC3-203ENST00000445889 MINOS1Q5TGZ0 78 aa10.8□□□□□ -0.68
ERCC3-203ENST00000445889 RAXQ9Y2V3 346 aa10.8□□□□□ -0.68
ERCC3-203ENST00000445889 PHLDA3Q9Y5J5 127 aa10.8□□□□□ -0.68
ERCC3-203ENST00000445889 MINOS1-NBL1R4GNA1 71 aa10.8□□□□□ -0.68
ERCC3-203ENST00000445889 A0A1B0GWB2 263 aa10.79□□□□□ -0.68
ERCC3-203ENST00000445889 SUMO2P61956 95 aaKnown RBP10.79□□□□□ -0.68
ERCC3-203ENST00000445889 LY6EQ16553 131 aa10.79□□□□□ -0.68
ERCC3-203ENST00000445889 SCGB1D4Q6XE38 83 aa10.79□□□□□ -0.68
ERCC3-203ENST00000445889 PGPEP1Q9NXJ5 209 aa10.79□□□□□ -0.68
ERCC3-203ENST00000445889 TRBV7-3A0A075B6L6 115 aa10.79□□□□□ -0.68
ERCC3-203ENST00000445889 TGFAP01135 160 aa10.79□□□□□ -0.68
ERCC3-203ENST00000445889 HLA-DRB4P13762 266 aa10.79□□□□□ -0.68
ERCC3-203ENST00000445889 RAB9AP51151 201 aa10.79□□□□□ -0.68
ERCC3-203ENST00000445889 CLEC2AQ6UVW9 174 aa10.79□□□□□ -0.68
ERCC3-203ENST00000445889 PLEKHB2Q96CS7 222 aa10.79□□□□□ -0.68
ERCC3-203ENST00000445889 HLA-DRB4X5D2U9 266 aa10.79□□□□□ -0.68
ERCC3-203ENST00000445889 CENPVL3A0A0U1RRI6 287 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms