RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 TRAV12-2A0A075B6T6 113 aa12.91□□□□□ -0.34
FN1-208ENST00000426059 A0A1B0GUT8 65 aa12.91□□□□□ -0.34
FN1-208ENST00000426059 XKRY2A2RUG3 117 aa12.91□□□□□ -0.34
FN1-208ENST00000426059 ATP5L2Q7Z4Y8 100 aa12.9□□□□□ -0.34
FN1-208ENST00000426059 ZNF256Q9Y2P7 627 aaPredicted RBP12.9□□□□□ -0.34
FN1-208ENST00000426059 HLA-DQA1P01909 254 aa12.89□□□□□ -0.35
FN1-208ENST00000426059 APCSP02743 223 aa12.89□□□□□ -0.35
FN1-208ENST00000426059 FXYD7P58549 80 aa12.89□□□□□ -0.35
FN1-208ENST00000426059 FER1L6-AS1Q8NA97 138 aa12.89□□□□□ -0.35
FN1-208ENST00000426059 OR10D4PQ8NGN7 298 aa12.89□□□□□ -0.35
FN1-208ENST00000426059 SPRY2O43597 315 aa12.89□□□□□ -0.35
FN1-208ENST00000426059 CRISP2P16562 243 aa12.89□□□□□ -0.35
FN1-208ENST00000426059 SPINK13Q1W4C9 94 aa12.89□□□□□ -0.35
FN1-208ENST00000426059 MAP6D1Q9H9H5 199 aa12.89□□□□□ -0.35
FN1-208ENST00000426059 PF4P02776 101 aa12.88□□□□□ -0.35
FN1-208ENST00000426059 MT-ND6P03923 174 aa12.88□□□□□ -0.35
FN1-208ENST00000426059 IGLC6P0CF74 106 aa12.88□□□□□ -0.35
FN1-208ENST00000426059 RASL11AQ6T310 242 aa12.88□□□□□ -0.35
FN1-208ENST00000426059 TRAV12-3A0A0B4J271 114 aa12.88□□□□□ -0.35
FN1-208ENST00000426059 RPS20P60866 119 aaKnown RBP12.88□□□□□ -0.35
FN1-208ENST00000426059 FOXI2Q6ZQN5 318 aa12.88□□□□□ -0.35
FN1-208ENST00000426059 SPATA3Q8NHX4 192 aa12.88□□□□□ -0.35
FN1-208ENST00000426059 NOTCH3Q9UM47 2321 aa12.88□□□□□ -0.35
FN1-208ENST00000426059 TRAV21A0A0B4J279 112 aa12.87□□□□□ -0.35
FN1-208ENST00000426059 KLLNB2CW77 178 aa12.87□□□□□ -0.35
FN1-208ENST00000426059 F2Z2F3 143 aa12.87□□□□□ -0.35
FN1-208ENST00000426059 COX19Q49B96 90 aa12.87□□□□□ -0.35
FN1-208ENST00000426059 C14orf144Q96I85 54 aa12.87□□□□□ -0.35
FN1-208ENST00000426059 SPAG8Q99932 426 aaPredicted RBP12.87□□□□□ -0.35
FN1-208ENST00000426059 MSRB1Q9NZV6 116 aa12.87□□□□□ -0.35
FN1-208ENST00000426059 TIMM8BQ9Y5J9 83 aaPredicted RBP12.87□□□□□ -0.35
FN1-208ENST00000426059 ANXA2RQ3ZCQ2 193 aa12.87□□□□□ -0.35
FN1-208ENST00000426059 OR4C46A6NHA9 309 aa12.86□□□□□ -0.35
FN1-208ENST00000426059 NTF3P20783 257 aa12.86□□□□□ -0.35
FN1-208ENST00000426059 SRIP30626 198 aa12.86□□□□□ -0.35
FN1-208ENST00000426059 Q6AWC8 147 aa12.86□□□□□ -0.35
FN1-208ENST00000426059 SIGLEC8Q9NYZ4 499 aa12.86□□□□□ -0.35
FN1-208ENST00000426059 GNRH2O43555 120 aa12.86□□□□□ -0.35
FN1-208ENST00000426059 RIGQ13278 110 aa12.86□□□□□ -0.35
FN1-208ENST00000426059 ODF3L2Q3SX64 289 aa12.86□□□□□ -0.35
FN1-208ENST00000426059 TMEM256Q8N2U0 113 aa12.86□□□□□ -0.35
FN1-208ENST00000426059 BORCS7Q96B45 105 aa12.86□□□□□ -0.35
FN1-208ENST00000426059 TRAV2A0A0B4J234 112 aa12.85□□□□□ -0.35
FN1-208ENST00000426059 TWIST1Q15672 202 aa12.85□□□□□ -0.35
FN1-208ENST00000426059 AMTNQ6UX39 209 aa12.85□□□□□ -0.35
FN1-208ENST00000426059 FBN1P35555 2871 aaKnown RBP12.85□□□□□ -0.35
FN1-208ENST00000426059 TRBV7-9A0A0J9YWB2 115 aa12.85□□□□□ -0.35
FN1-208ENST00000426059 H3BMM0 161 aa12.85□□□□□ -0.35
FN1-208ENST00000426059 CTRLP40313 264 aa12.85□□□□□ -0.35
FN1-208ENST00000426059 HIST3H2BBQ8N257 126 aa12.85□□□□□ -0.35
FN1-208ENST00000426059 TP53TG3Q9ULZ0 132 aa12.85□□□□□ -0.35
FN1-208ENST00000426059 TRRAPQ9Y4A5 3859 aa12.85□□□□□ -0.35
FN1-208ENST00000426059 MAST4O15021 2626 aa12.84□□□□□ -0.35
FN1-208ENST00000426059 A0A1B0GV90 55 aa12.84□□□□□ -0.35
FN1-208ENST00000426059 RBMY1BA6NDE4 496 aaKnown RBP12.84□□□□□ -0.35
FN1-208ENST00000426059 RBMY1EA6NEQ0 496 aaKnown RBP12.84□□□□□ -0.35
FN1-208ENST00000426059 H3BVH4 76 aa12.84□□□□□ -0.35
FN1-208ENST00000426059 NUPR1O60356 82 aa12.84□□□□□ -0.35
FN1-208ENST00000426059 DUSP14O95147 198 aaKnown RBP12.84□□□□□ -0.35
FN1-208ENST00000426059 RBMY1DP0C7P1 496 aaKnown RBP12.84□□□□□ -0.35
FN1-208ENST00000426059 LINC00482Q8N8I6 264 aa12.84□□□□□ -0.35
FN1-208ENST00000426059 OR10AG1Q8NH19 301 aa12.84□□□□□ -0.35
FN1-208ENST00000426059 TRAV25A0A0B4J276 109 aa12.84□□□□□ -0.35
FN1-208ENST00000426059 HLA-DRB4P13762 266 aa12.84□□□□□ -0.35
FN1-208ENST00000426059 CDKN1BP46527 198 aa12.84□□□□□ -0.35
FN1-208ENST00000426059 HLA-DRB4X5D2U9 266 aa12.84□□□□□ -0.35
FN1-208ENST00000426059 C7orf71A4D174 169 aa12.83□□□□□ -0.36
FN1-208ENST00000426059 IGLV1-51P01701 117 aa12.83□□□□□ -0.36
FN1-208ENST00000426059 LEPP41159 167 aa12.83□□□□□ -0.36
FN1-208ENST00000426059 DNLZQ5SXM8 178 aa12.83□□□□□ -0.36
FN1-208ENST00000426059 ZNF324O75467 553 aaPredicted RBP12.83□□□□□ -0.36
FN1-208ENST00000426059 IQCJQ1A5X6 159 aa12.83□□□□□ -0.36
FN1-208ENST00000426059 CITED1Q99966 193 aa12.83□□□□□ -0.36
FN1-208ENST00000426059 CD7P09564 240 aa12.82□□□□□ -0.36
FN1-208ENST00000426059 FABP4P15090 132 aa12.82□□□□□ -0.36
FN1-208ENST00000426059 DDTP30046 118 aa12.82□□□□□ -0.36
FN1-208ENST00000426059 PKIAP61925 76 aa12.82□□□□□ -0.36
FN1-208ENST00000426059 TSTD3H0UI37 97 aa12.81□□□□□ -0.36
FN1-208ENST00000426059 ODF3Q96PU9 254 aa12.81□□□□□ -0.36
FN1-208ENST00000426059 WFDC10AQ9H1F0 79 aa12.81□□□□□ -0.36
FN1-208ENST00000426059 AMN1Q8IY45 258 aa12.81□□□□□ -0.36
FN1-208ENST00000426059 RBMY1A1P0DJD3 496 aaKnown RBP12.8□□□□□ -0.36
FN1-208ENST00000426059 RBMY1CP0DJD4 496 aa12.8□□□□□ -0.36
FN1-208ENST00000426059 S100A4P26447 101 aaKnown RBP12.8□□□□□ -0.36
FN1-208ENST00000426059 LINC00310P59036 64 aa12.8□□□□□ -0.36
FN1-208ENST00000426059 RBMY1FQ15415 496 aaKnown RBP12.8□□□□□ -0.36
FN1-208ENST00000426059 KRTAP24-1Q3LI83 254 aa12.8□□□□□ -0.36
FN1-208ENST00000426059 COA6Q5JTJ3 125 aaKnown RBP12.8□□□□□ -0.36
FN1-208ENST00000426059 FAM159AQ6UWV7 190 aa12.8□□□□□ -0.36
FN1-208ENST00000426059 BAGE3Q86Y29 109 aa12.8□□□□□ -0.36
FN1-208ENST00000426059 RCHY1Q96PM5 261 aa12.8□□□□□ -0.36
FN1-208ENST00000426059 ALKBH7Q9BT30 221 aaPredicted RBP12.8□□□□□ -0.36
FN1-208ENST00000426059 LOC102724200A0A096LPH7 203 aaPredicted RBP12.8□□□□□ -0.36
FN1-208ENST00000426059 PRO1933Q9H354 126 aa12.8□□□□□ -0.36
FN1-208ENST00000426059 OR11H12B2RN74 326 aa12.79□□□□□ -0.36
FN1-208ENST00000426059 CRXO43186 299 aaPredicted RBP12.79□□□□□ -0.36
FN1-208ENST00000426059 SERF1AO75920 110 aa12.79□□□□□ -0.36
FN1-208ENST00000426059 MUC4Q99102 2169 aa12.79□□□□□ -0.36
FN1-208ENST00000426059 PRM2P04554 102 aa12.79□□□□□ -0.36
FN1-208ENST00000426059 TSPOP30536 169 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms